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The map label for this gene is ygfB

Identifier: 15672642

GI number: 15672642

Start: 652684

End: 653757

Strand: Reverse

Name: ygfB

Synonym: L52704

Alternate gene names: 15672642

Gene position: 653757-652684 (Counterclockwise)

Preceding gene: 15672643

Following gene: 15672641

Centisome position: 27.64

GC content: 32.22

Gene sequence:

>1074_bases
ATGTTTTTAGCACTAAGAGAAATACGTTATAATAAAGCTCGTTACACCTTAATCGGAGCTATTATTTTTTTAATCGCTTA
TGTAGTCTTTATACTGTCCGGACTATCTGTAGGACTTGCCAGTCAATTTAAACAAGCTGTCCTTGATTGGAAGGCCGAAA
AAGTCGTTTTATCAACAAGTTCAAATAATATTATTTCTGCTTCACAAATTACTTCTGATGATTTAAGTAATATTCATATA
GAAAATGGATCAGAATTATCATTGTTTTCTACTTCTATGCGCAAATCAAAGAGCGAGCGAGACAATATTGCTATTATTGC
CCTGCCTGATAAGTCTAAAATCATGCCAGAAGTTCTTGAGGGAAAAAAATTTACTGACAATCATTTAGAAATGATTATCT
CAAAAAAGCTGGCAAATCAAGGATATAAAATCGGTCAAGAAGTTTCCGTGGGAAATAATAATATTAAAATAAAAATTGTC
GGAATTTCAAAATCCTCTTCTTATTCTGCCTCGCCTGTTATCTATACTTCGTTTTCCGCTTTGAATCAGATAAAGTTTGG
TGAAAAAAGCACTTCAACTTCTTCTGTTAATGCTGTAGTTGTAAAATCTGGAAAAGTTAAGATTGATTCTTCTATTTCAA
ATCAATATAAAGTCCTGTCTATTTCTGATTTAATTAACGATATTCCAGGTTATTCTGCTCAAAATATGACACTCAGCGCA
ATGATTTACTTCTTATTTCTGATTGTACTGTTGATTATTGGAGTCTTTATGTATGTTATAACTCTTCAAAAAGTTCCGAT
TTTTGGCATAATGAAAGCTCAAGGAATTTCAAATCGCATAATAATGAACTCTTTACTTGGTCAAAGCTTTATCATTAGTT
TAGTTGGCGTCTTCGTTGCTTTTATAGCAAGTTATGGAACTAGCTTTATCTTACCCGATGCAATGCCATTTGAAATTAGT
CTTACAAACTGGTTGCTCTATGCTTTAATTCTCATCATCGTATCAATTATTGGGTCACTTTTTTCAATCATTACTATCCG
TAAAATTGACCCAACGAAAGCAATTGGAGGTTAA

Upstream 100 bases:

>100_bases
CTGAGAAAACTTTTATTGAAAATTATGATAAAGAAATCAAATTAGTCACCGAAGGTTTACTTAATTATATTACTGACAGA
AAAAACTGAAAGGAGATTTT

Downstream 100 bases:

>100_bases
AAATGAAAACAATTCTTAAAATGGAAAATGTAAAAAAATCTTTTGGTAGTGGTCATAATGAGATTCAGGCACTCAAAGGA
ATCGATTTAGCAGTCAATCA

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MFLALREIRYNKARYTLIGAIIFLIAYVVFILSGLSVGLASQFKQAVLDWKAEKVVLSTSSNNIISASQITSDDLSNIHI
ENGSELSLFSTSMRKSKSERDNIAIIALPDKSKIMPEVLEGKKFTDNHLEMIISKKLANQGYKIGQEVSVGNNNIKIKIV
GISKSSSYSASPVIYTSFSALNQIKFGEKSTSTSSVNAVVVKSGKVKIDSSISNQYKVLSISDLINDIPGYSAQNMTLSA
MIYFLFLIVLLIIGVFMYVITLQKVPIFGIMKAQGISNRIIMNSLLGQSFIISLVGVFVAFIASYGTSFILPDAMPFEIS
LTNWLLYALILIIVSIIGSLFSIITIRKIDPTKAIGG

Sequences:

>Translated_357_residues
MFLALREIRYNKARYTLIGAIIFLIAYVVFILSGLSVGLASQFKQAVLDWKAEKVVLSTSSNNIISASQITSDDLSNIHI
ENGSELSLFSTSMRKSKSERDNIAIIALPDKSKIMPEVLEGKKFTDNHLEMIISKKLANQGYKIGQEVSVGNNNIKIKIV
GISKSSSYSASPVIYTSFSALNQIKFGEKSTSTSSVNAVVVKSGKVKIDSSISNQYKVLSISDLINDIPGYSAQNMTLSA
MIYFLFLIVLLIIGVFMYVITLQKVPIFGIMKAQGISNRIIMNSLLGQSFIISLVGVFVAFIASYGTSFILPDAMPFEIS
LTNWLLYALILIIVSIIGSLFSIITIRKIDPTKAIGG
>Mature_357_residues
MFLALREIRYNKARYTLIGAIIFLIAYVVFILSGLSVGLASQFKQAVLDWKAEKVVLSTSSNNIISASQITSDDLSNIHI
ENGSELSLFSTSMRKSKSERDNIAIIALPDKSKIMPEVLEGKKFTDNHLEMIISKKLANQGYKIGQEVSVGNNNIKIKIV
GISKSSSYSASPVIYTSFSALNQIKFGEKSTSTSSVNAVVVKSGKVKIDSSISNQYKVLSISDLINDIPGYSAQNMTLSA
MIYFLFLIVLLIIGVFMYVITLQKVPIFGIMKAQGISNRIIMNSLLGQSFIISLVGVFVAFIASYGTSFILPDAMPFEIS
LTNWLLYALILIIVSIIGSLFSIITIRKIDPTKAIGG

Specific function: Part of the ABC transporter complex hrt involved in hemin import. Responsible for the translocation of the substrate across the membrane [H]

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family. HrtB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 39045; Mature: 39045

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLALREIRYNKARYTLIGAIIFLIAYVVFILSGLSVGLASQFKQAVLDWKAEKVVLSTS
CEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEC
SNNIISASQITSDDLSNIHIENGSELSLFSTSMRKSKSERDNIAIIALPDKSKIMPEVLE
CCCEEEHHHCCCCCCCEEEECCCCEEEHHHHHHHHCCCCCCCEEEEEECCCHHCCHHHHC
GKKFTDNHLEMIISKKLANQGYKIGQEVSVGNNNIKIKIVGISKSSSYSASPVIYTSFSA
CCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEEEECCCCCCCCCCEEEEEHHH
LNQIKFGEKSTSTSSVNAVVVKSGKVKIDSSISNQYKVLSISDLINDIPGYSAQNMTLSA
HHHHCCCCCCCCCCCCEEEEEECCCEEEECCCCCCEEEEEHHHHHHHCCCCCCCCHHHHH
MIYFLFLIVLLIIGVFMYVITLQKVPIFGIMKAQGISNRIIMNSLLGQSFIISLVGVFVA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
FIASYGTSFILPDAMPFEISLTNWLLYALILIIVSIIGSLFSIITIRKIDPTKAIGG
HHHHCCCCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC
>Mature Secondary Structure
MFLALREIRYNKARYTLIGAIIFLIAYVVFILSGLSVGLASQFKQAVLDWKAEKVVLSTS
CEEEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEC
SNNIISASQITSDDLSNIHIENGSELSLFSTSMRKSKSERDNIAIIALPDKSKIMPEVLE
CCCEEEHHHCCCCCCCEEEECCCCEEEHHHHHHHHCCCCCCCEEEEEECCCHHCCHHHHC
GKKFTDNHLEMIISKKLANQGYKIGQEVSVGNNNIKIKIVGISKSSSYSASPVIYTSFSA
CCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEEEEEECCCCCCCCCCEEEEEHHH
LNQIKFGEKSTSTSSVNAVVVKSGKVKIDSSISNQYKVLSISDLINDIPGYSAQNMTLSA
HHHHCCCCCCCCCCCCEEEEEECCCEEEECCCCCCEEEEEHHHHHHHCCCCCCCCHHHHH
MIYFLFLIVLLIIGVFMYVITLQKVPIFGIMKAQGISNRIIMNSLLGQSFIISLVGVFVA
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
FIASYGTSFILPDAMPFEISLTNWLLYALILIIVSIIGSLFSIITIRKIDPTKAIGG
HHHHCCCCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA