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The map label for this gene is ygcE

Identifier: 15672622

GI number: 15672622

Start: 628597

End: 629154

Strand: Reverse

Name: ygcE

Synonym: L28615

Alternate gene names: NA

Gene position: 629154-628597 (Counterclockwise)

Preceding gene: 15672639

Following gene: 15672621

Centisome position: 26.6

GC content: 35.84

Gene sequence:

>558_bases
ATGGTCAAATATTCCATAGAATTAAAACAACGCGTTATTCAAGATTATTTATCTGGCAAGGGAGGCTCTACCTATCTTGC
TAAACTGCACAACGTAGGTTCATCTAGTCAGGTTAGACACTGGATTCGCAATTATCGAGCAGAGGGACTTCCTACAGCTC
ACTCCAAAGTCAATAAAAATTATTCTATGGAGTTGAAAGAAAATGCGGTACAATGTTATTTAACAACTGATTTAACGTAT
GAAGCTGTGGCAAGAAAATTCGAAATTACTAATTTTACCTTACTTGCAAGCTGGGTTAATCATTTCAAAATTTATGGAGA
AGTCCCAATAAGCAAAAAGAGAGGACGGCGTAAAAAACTAGAAAGCATTGCATCGTCTATGACTCAGAACCCAAATGATT
CTCAACGAATTAAAGAACTTGAACAAGAATTACGTTATGCGCAAATTGAGGTAGCTTATTTAAAAGGACTTCGGAGATTG
GAGAAAAATGCTCTAATGAACAAAAATCAAGACTCATCTACAGTCTCCGTAAAACCTTCAAACTCAAAGAAATCTTGA

Upstream 100 bases:

>100_bases
CTTACTGACAGACTTAAGCGTTGAAAAATAAAAAAACCGTTACTTGTAGTGACCCCCAAAATATAGACTTTTCAAATCTA
TATTTCGGAGGTCTTTTCTT

Downstream 100 bases:

>100_bases
AAGTTACAGGATTCCCTAAAGCCACTTATTATTATTGGGTTAACTGTTTTGAACGGGTAAACAAAGATGAGCTTATCGAA
AAAGAAATGCTTAAAATACG

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS3/IS; ISEch2 OrfA; Transposase ISLasa7 IS3 Family; ISPsy8 Transposase OrfA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MVKYSIELKQRVIQDYLSGKGGSTYLAKLHNVGSSSQVRHWIRNYRAEGLPTAHSKVNKNYSMELKENAVQCYLTTDLTY
EAVARKFEITNFTLLASWVNHFKIYGEVPISKKRGRRKKLESIASSMTQNPNDSQRIKELEQELRYAQIEVAYLKGLRRL
EKNALMNKNQDSSTVSVKPSNSKKS

Sequences:

>Translated_185_residues
MVKYSIELKQRVIQDYLSGKGGSTYLAKLHNVGSSSQVRHWIRNYRAEGLPTAHSKVNKNYSMELKENAVQCYLTTDLTY
EAVARKFEITNFTLLASWVNHFKIYGEVPISKKRGRRKKLESIASSMTQNPNDSQRIKELEQELRYAQIEVAYLKGLRRL
EKNALMNKNQDSSTVSVKPSNSKKS
>Mature_185_residues
MVKYSIELKQRVIQDYLSGKGGSTYLAKLHNVGSSSQVRHWIRNYRAEGLPTAHSKVNKNYSMELKENAVQCYLTTDLTY
EAVARKFEITNFTLLASWVNHFKIYGEVPISKKRGRRKKLESIASSMTQNPNDSQRIKELEQELRYAQIEVAYLKGLRRL
EKNALMNKNQDSSTVSVKPSNSKKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21264; Mature: 21264

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKYSIELKQRVIQDYLSGKGGSTYLAKLHNVGSSSQVRHWIRNYRAEGLPTAHSKVNKN
CCEEHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCC
YSMELKENAVQCYLTTDLTYEAVARKFEITNFTLLASWVNHFKIYGEVPISKKRGRRKKL
CCEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH
ESIASSMTQNPNDSQRIKELEQELRYAQIEVAYLKGLRRLEKNALMNKNQDSSTVSVKPS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCC
NSKKS
CCCCC
>Mature Secondary Structure
MVKYSIELKQRVIQDYLSGKGGSTYLAKLHNVGSSSQVRHWIRNYRAEGLPTAHSKVNKN
CCEEHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHCCC
YSMELKENAVQCYLTTDLTYEAVARKFEITNFTLLASWVNHFKIYGEVPISKKRGRRKKL
CCEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHH
ESIASSMTQNPNDSQRIKELEQELRYAQIEVAYLKGLRRLEKNALMNKNQDSSTVSVKPS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCC
NSKKS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA