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The map label for this gene is tra1077D

Identifier: 15672621

GI number: 15672621

Start: 627782

End: 628465

Strand: Reverse

Name: tra1077D

Synonym: L0469

Alternate gene names: 15672621

Gene position: 628465-627782 (Counterclockwise)

Preceding gene: 15672622

Following gene: 15672620

Centisome position: 26.57

GC content: 34.36

Gene sequence:

>684_bases
ATGAGTGAATTACTTAAGCAACGTGGCTATCACGTCAACCACAAGAAGGTACAGCGCTTAATGAAGAAGCTAGGGCTTCG
TGTGACGTCTTATTGGCACAAATCACGTAAATATAATTCATATAAAGGAAAAGTAGGGACGGTAGCTAAAAATAAATTAC
ACAGACGATTCAGAACTTCCACTCCTCATCAAAAAATCACAACAGATACGACAGAATTCAAATATTATGAAGATGGAATT
CAGAAAAAGTGTTATCTCAATCCTTACATTGATTTATTTAATAGCGAGGTGATTAGTTATCATATCTCTAAACAACCCTC
TTATCAATCAATTGATATTGCTCTAAATCAAGCCTTAGCTGTGACATCTGATTGTCCTTATCGACGTACTTTCCACTCAG
ATCAAGGATGGGGATACCAAATGAGAGACTATGTTTCTAAATTAAAATCTCATAGAATTTTTCAGTCTATGAGCCGTAAA
GGAAACGGTCATGATAATTCAGTTATGGAGAATTTCTTTGGGCTACTTAAACAAGAAATTTACTACGGACATATCTTCTC
GTCTTTCGAAGAACTTGAACAGGTTATTGTAATCTGGATTAGGTACTATAATACAAAACGAATCAAACAAAAATTGAACT
GGATGAGTCCAATTCAATTTCGCTTGAATTACCAAAACAATTAA

Upstream 100 bases:

>100_bases
TTATTGGGTTAACTGTTTTGAACGGGTAAACAAAGATGAGCTTATCGAAAAAGAAATGCTTAAAATACGTCAAGAACATG
CCAATGCAGGTTATCGTCCA

Downstream 100 bases:

>100_bases
AAAAATCCAAGTATTTTGGAAAGGTTATAATAAACTAGACACAAAGTTAAGAGAAATCGTGGAAAGGTTTATTATGGCAA
GAAGAAAATTCGATAAACAA

Product: IS1077D transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSELLKQRGYHVNHKKVQRLMKKLGLRVTSYWHKSRKYNSYKGKVGTVAKNKLHRRFRTSTPHQKITTDTTEFKYYEDGI
QKKCYLNPYIDLFNSEVISYHISKQPSYQSIDIALNQALAVTSDCPYRRTFHSDQGWGYQMRDYVSKLKSHRIFQSMSRK
GNGHDNSVMENFFGLLKQEIYYGHIFSSFEELEQVIVIWIRYYNTKRIKQKLNWMSPIQFRLNYQNN

Sequences:

>Translated_227_residues
MSELLKQRGYHVNHKKVQRLMKKLGLRVTSYWHKSRKYNSYKGKVGTVAKNKLHRRFRTSTPHQKITTDTTEFKYYEDGI
QKKCYLNPYIDLFNSEVISYHISKQPSYQSIDIALNQALAVTSDCPYRRTFHSDQGWGYQMRDYVSKLKSHRIFQSMSRK
GNGHDNSVMENFFGLLKQEIYYGHIFSSFEELEQVIVIWIRYYNTKRIKQKLNWMSPIQFRLNYQNN
>Mature_226_residues
SELLKQRGYHVNHKKVQRLMKKLGLRVTSYWHKSRKYNSYKGKVGTVAKNKLHRRFRTSTPHQKITTDTTEFKYYEDGIQ
KKCYLNPYIDLFNSEVISYHISKQPSYQSIDIALNQALAVTSDCPYRRTFHSDQGWGYQMRDYVSKLKSHRIFQSMSRKG
NGHDNSVMENFFGLLKQEIYYGHIFSSFEELEQVIVIWIRYYNTKRIKQKLNWMSPIQFRLNYQNN

Specific function: Involved in the transposition of the insertion sequence is150 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1789981, Length=218, Percent_Identity=45.8715596330275, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1788405, Length=223, Percent_Identity=32.7354260089686, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787263, Length=223, Percent_Identity=32.7354260089686, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786753, Length=223, Percent_Identity=32.7354260089686, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786570, Length=223, Percent_Identity=32.7354260089686, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786490, Length=223, Percent_Identity=32.7354260089686, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 27280; Mature: 27148

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELLKQRGYHVNHKKVQRLMKKLGLRVTSYWHKSRKYNSYKGKVGTVAKNKLHRRFRTS
CCHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
TPHQKITTDTTEFKYYEDGIQKKCYLNPYIDLFNSEVISYHISKQPSYQSIDIALNQALA
CCCCCCCCCCHHHHHHHHCCCCEEECCHHHHHHCCHHHEEECCCCCCCCHHHHHHHHHHH
VTSDCPYRRTFHSDQGWGYQMRDYVSKLKSHRIFQSMSRKGNGHDNSVMENFFGLLKQEI
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
YYGHIFSSFEELEQVIVIWIRYYNTKRIKQKLNWMSPIQFRLNYQNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
>Mature Secondary Structure 
SELLKQRGYHVNHKKVQRLMKKLGLRVTSYWHKSRKYNSYKGKVGTVAKNKLHRRFRTS
CHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
TPHQKITTDTTEFKYYEDGIQKKCYLNPYIDLFNSEVISYHISKQPSYQSIDIALNQALA
CCCCCCCCCCHHHHHHHHCCCCEEECCHHHHHHCCHHHEEECCCCCCCCHHHHHHHHHHH
VTSDCPYRRTFHSDQGWGYQMRDYVSKLKSHRIFQSMSRKGNGHDNSVMENFFGLLKQEI
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
YYGHIFSSFEELEQVIVIWIRYYNTKRIKQKLNWMSPIQFRLNYQNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]