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The map label for this gene is tra981C

Identifier: 15672639

GI number: 15672639

Start: 650157

End: 650996

Strand: Reverse

Name: tra981C

Synonym: L0434

Alternate gene names: 15672639

Gene position: 650996-650157 (Counterclockwise)

Preceding gene: 15672640

Following gene: 15672622

Centisome position: 27.52

GC content: 35.36

Gene sequence:

>840_bases
ATGGCTCAAACCATACAAACTTTAGCACTCAATGTCAGACTAAGCTGTCAACTCCTTGATGTTCCTGAATCAAGTTATTA
TGAACGGATTAACCGACATCCATCTAAAACTCAATTAAGGAGACAATACCTGTCACTCAAAATTTCTCAACTCTTCAATG
CTAACCGAGGAATCTATGGTGCTCCTAAAATTCATCATCTTCTACTTAAACAAGGGGAAAAAGTCGGGTTAAAACTGGTA
CAGAAGCTAATGAAGCAACTTCAACTCAAGTCTGTAGTCATTAAGAAATTTAAGCCTGGATACTCACTAAGTGATCACAT
CAATCGAAAAAATCTCATACAGACTGAACCTACAAAGAAAAATAAGGTTTGGTCAACTGATATTACGTATATCTCTACTC
AACAAGGCTGGTGTTATCTCTCAACCATTATGGATCGGTATACTAAAAAAGTCATTGCTTGGGATTTAGGCAAGAGAATG
ACTGTTGGGTTAGTCCAAAGAACATTAAATAAAGCGGTTCAATCACAAAATAAACCCAAAGCTATTATTATTCACTCTGA
CCAAGGAAGTCAATATACGAGTCATGAGTATGAGGAGAATATCAATCTTTATGGTATGACGCATTCCTTTAGTCGTAAAG
GATACCCTTATCATAATGCCAGTCTTGAATCTTGGCATGGACATTTAAAAAGAGAGTGGGTGTATCAATTTAAATATAAG
AACTTTGAAGAAGCCTATCAGAGTATTTTCTGGTACATCGAAGCCTTTTATAATTCAAAACGAATCCATCAAAGTTTAGG
GTATCTTACACCTAATCAATTTGAAAAAATGACAGCTTAA

Upstream 100 bases:

>100_bases
TAGAATTAAAAAGACAACTGGCTAAAGTTAAGGAAGAACGAGACATCTTAAAAAAAGTATTGACCATATTCGCCGAGAAA
AAGAAGTGAGTGCTGCGGAT

Downstream 100 bases:

>100_bases
ACAAATTACCAAAATTTATACTTTCTTGACTCTAAGAACTTGACTTAACGTCACTTTTTTCTAAGTTTTTTAATTAAAAA
TATTATCATATGGATAAACA

Product: transposase of IS981C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLV
QKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYISTQQGWCYLSTIMDRYTKKVIAWDLGKRM
TVGLVQRTLNKAVQSQNKPKAIIIHSDQGSQYTSHEYEENINLYGMTHSFSRKGYPYHNASLESWHGHLKREWVYQFKYK
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKMTA

Sequences:

>Translated_279_residues
MAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLV
QKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYISTQQGWCYLSTIMDRYTKKVIAWDLGKRM
TVGLVQRTLNKAVQSQNKPKAIIIHSDQGSQYTSHEYEENINLYGMTHSFSRKGYPYHNASLESWHGHLKREWVYQFKYK
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKMTA
>Mature_278_residues
AQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYGAPKIHHLLLKQGEKVGLKLVQ
KLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKKNKVWSTDITYISTQQGWCYLSTIMDRYTKKVIAWDLGKRMT
VGLVQRTLNKAVQSQNKPKAIIIHSDQGSQYTSHEYEENINLYGMTHSFSRKGYPYHNASLESWHGHLKREWVYQFKYKN
FEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKMTA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=244, Percent_Identity=27.0491803278689, Blast_Score=106, Evalue=2e-23,
Organism=Escherichia coli, GI1788405, Length=274, Percent_Identity=30.6569343065693, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1787263, Length=274, Percent_Identity=30.6569343065693, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1786753, Length=274, Percent_Identity=30.6569343065693, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1786570, Length=274, Percent_Identity=30.6569343065693, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1786490, Length=274, Percent_Identity=30.6569343065693, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1789981, Length=234, Percent_Identity=32.4786324786325, Blast_Score=127, Evalue=8e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 32863; Mature: 32732

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYG
CCCHHHHHHHEEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
APKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKK
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
NKVWSTDITYISTQQGWCYLSTIMDRYTKKVIAWDLGKRMTVGLVQRTLNKAVQSQNKPK
CCEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
AIIIHSDQGSQYTSHEYEENINLYGMTHSFSRKGYPYHNASLESWHGHLKREWVYQFKYK
EEEEECCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKMTA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC
>Mature Secondary Structure 
AQTIQTLALNVRLSCQLLDVPESSYYERINRHPSKTQLRRQYLSLKISQLFNANRGIYG
CCHHHHHHHEEEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
APKIHHLLLKQGEKVGLKLVQKLMKQLQLKSVVIKKFKPGYSLSDHINRKNLIQTEPTKK
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCC
NKVWSTDITYISTQQGWCYLSTIMDRYTKKVIAWDLGKRMTVGLVQRTLNKAVQSQNKPK
CCEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
AIIIHSDQGSQYTSHEYEENINLYGMTHSFSRKGYPYHNASLESWHGHLKREWVYQFKYK
EEEEECCCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
NFEEAYQSIFWYIEAFYNSKRIHQSLGYLTPNQFEKMTA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]