Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
---|---|
Accession | NC_002662 |
Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is ptcA
Identifier: 15672396
GI number: 15672396
Start: 419287
End: 419637
Strand: Direct
Name: ptcA
Synonym: L19292
Alternate gene names: 15672396
Gene position: 419287-419637 (Clockwise)
Preceding gene: 15672395
Following gene: 15672397
Centisome position: 17.72
GC content: 41.03
Gene sequence:
>351_bases ATGACTGATAAATACGAGAATCCAACAAGTGATGACTACATGGGTGTTGTAATGGGCATTATCATGAGTGGAGGAAATGC CAAAGGTTTAGCCTTCCAAGCCATTCAACAAGCCAAAGCTGGTGAATTTGCCGAAGCTGAAAGTTCATTAAACGAAGCGA GTGAACAACTTCGTGAAGCACATGATGTTCAGACTGACCTTTTGACACGTTTAGCTCAAGGCGAAAAAATTGGTTGGAAT CTTTACATGGTTCATGCTCAAGACCACTTAATGAATGCGATTACCTTTAAAGACCTTGCTGTAGAAGTTGTCGGTCAAGA ACAACGCCTGCAAGCACTTGAAAACAAATAA
Upstream 100 bases:
>100_bases AAACTTGATGAATTAAGGTTTGAAAATTTCAAACTTGTGAAAGAGCGAAAGCTCTTTTACTATGTAAATATCTAAGCAAA GAGAAATGGGAAGATAAGAA
Downstream 100 bases:
>100_bases TATAGCTCCTAGCTTATTAGAAAAGCAAGATTAAAAGTTGCGGAGACGCAACTTTTTTCTAACCAAAAAGTTTAAAGAAG AAAGGAGAGAATGATGAGTT
Product: cellobiose-specific PTS system IIA component
Products: protein histidine; sugar phosphate
Alternate protein names: EIIA-Lic; EIII-Lic; PTS system lichenan-specific EIIA component [H]
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MTDKYENPTSDDYMGVVMGIIMSGGNAKGLAFQAIQQAKAGEFAEAESSLNEASEQLREAHDVQTDLLTRLAQGEKIGWN LYMVHAQDHLMNAITFKDLAVEVVGQEQRLQALENK
Sequences:
>Translated_116_residues MTDKYENPTSDDYMGVVMGIIMSGGNAKGLAFQAIQQAKAGEFAEAESSLNEASEQLREAHDVQTDLLTRLAQGEKIGWN LYMVHAQDHLMNAITFKDLAVEVVGQEQRLQALENK >Mature_115_residues TDKYENPTSDDYMGVVMGIIMSGGNAKGLAFQAIQQAKAGEFAEAESSLNEASEQLREAHDVQTDLLTRLAQGEKIGWNL YMVHAQDHLMNAITFKDLAVEVVGQEQRLQALENK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG1447
COG function: function code G; Phosphotransferase system cellobiose-specific component IIA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788031, Length=97, Percent_Identity=41.2371134020619, Blast_Score=78, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003188 [H]
Pfam domain/function: PF02255 PTS_IIA [H]
EC number: 2.7.1.69
Molecular weight: Translated: 12815; Mature: 12683
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS51095 PTS_EIIA_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKYENPTSDDYMGVVMGIIMSGGNAKGLAFQAIQQAKAGEFAEAESSLNEASEQLREA CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH HDVQTDLLTRLAQGEKIGWNLYMVHAQDHLMNAITFKDLAVEVVGQEQRLQALENK HHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHCCC >Mature Secondary Structure TDKYENPTSDDYMGVVMGIIMSGGNAKGLAFQAIQQAKAGEFAEAESSLNEASEQLREA CCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH HDVQTDLLTRLAQGEKIGWNLYMVHAQDHLMNAITFKDLAVEVVGQEQRLQALENK HHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8990303; 8969509; 9384377 [H]