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The map label for this gene is ydhB

Identifier: 15672349

GI number: 15672349

Start: 371163

End: 371975

Strand: Direct

Name: ydhB

Synonym: L171116

Alternate gene names: 15672349

Gene position: 371163-371975 (Clockwise)

Preceding gene: 15672348

Following gene: 15672350

Centisome position: 15.69

GC content: 36.41

Gene sequence:

>813_bases
ATGAAGTTTATCGCCATTGTTGGGACCAATGCTAGTTTTTCTTATAATCGAAAACTCCTTTGGTACATGAAAAAACATTT
TACAAAAGAAGCACAAATTGAAATAGTAGAAATTACAGACCTGCCACTATTTTCTGAGGATATCAGAGAAATTCCTGAAG
GGGTTCAGAAAATTGCAGAGGCAATAAGAGAAGAGGATGGTTTGATTTTTTCAACGCCTGAATATGATCATGCGATTACT
GCTGCTTTGAAATCATTGATAGAATGGCTGTCATGGATAAAACCTCAGCCATTGAACAGTCTACCGGTTATGATTGTTGG
GGTTTCTCTTGGAAATATGGGAACTGTTTTTGCCCAAGAAAACCTTCGACAAATTTTGAGTTCACCGGGTCTGGATGCTT
TTGTTTTACCTTCCAATCAATTTCTTTTAGGACGAGCAGCTGAAGCATTTAATCAACAAGATGAATTGATCGATGAACGG
ACAATTAGCTGGTTGGAGCATTGTTTTAATAATTTTATGATTTACAGTAAAACATTAAAACCGATGAGACTTCCTTCGCT
AAAAAAAGAGAATAATAAAGAAATAATTGAGAGTGAGGAAAGTAAAAACTCTACAGAAACCGATGAAGTTTGGTGGACTA
AAGAAACGAATCAAGGATTGCCAGTTCTTTCCGATGCAGATACAGGAGCTTCTGAGTATGAAGAAGTGATTGAACCTGAA
AATTCGGCCTATCTACAATTTTTGGAAGAGGGAGAAACTTGGAAGTTTGATGATATTGGAGAATTAAGAGGAAAATCGGA
AGAAGAAGACTGA

Upstream 100 bases:

>100_bases
TTCGTATAGAGTTGTGGTTTTTTATTTATAATATAAAGAGAAGTAAGGACATTTTTTAAGAGTTACTTACCCAAAATTAC
CAAGTGAAAGAGGAAATGGG

Downstream 100 bases:

>100_bases
TGAAAATTTTAGAAAAAAAGTCAACCTTGAAAATTTCCAAAACTTATCGAGCTTTAGGGACAGTCATTAGCTTAACAATT
TATGGTCATCAAGACGAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MKFIAIVGTNASFSYNRKLLWYMKKHFTKEAQIEIVEITDLPLFSEDIREIPEGVQKIAEAIREEDGLIFSTPEYDHAIT
AALKSLIEWLSWIKPQPLNSLPVMIVGVSLGNMGTVFAQENLRQILSSPGLDAFVLPSNQFLLGRAAEAFNQQDELIDER
TISWLEHCFNNFMIYSKTLKPMRLPSLKKENNKEIIESEESKNSTETDEVWWTKETNQGLPVLSDADTGASEYEEVIEPE
NSAYLQFLEEGETWKFDDIGELRGKSEEED

Sequences:

>Translated_270_residues
MKFIAIVGTNASFSYNRKLLWYMKKHFTKEAQIEIVEITDLPLFSEDIREIPEGVQKIAEAIREEDGLIFSTPEYDHAIT
AALKSLIEWLSWIKPQPLNSLPVMIVGVSLGNMGTVFAQENLRQILSSPGLDAFVLPSNQFLLGRAAEAFNQQDELIDER
TISWLEHCFNNFMIYSKTLKPMRLPSLKKENNKEIIESEESKNSTETDEVWWTKETNQGLPVLSDADTGASEYEEVIEPE
NSAYLQFLEEGETWKFDDIGELRGKSEEED
>Mature_270_residues
MKFIAIVGTNASFSYNRKLLWYMKKHFTKEAQIEIVEITDLPLFSEDIREIPEGVQKIAEAIREEDGLIFSTPEYDHAIT
AALKSLIEWLSWIKPQPLNSLPVMIVGVSLGNMGTVFAQENLRQILSSPGLDAFVLPSNQFLLGRAAEAFNQQDELIDER
TISWLEHCFNNFMIYSKTLKPMRLPSLKKENNKEIIESEESKNSTETDEVWWTKETNQGLPVLSDADTGASEYEEVIEPE
NSAYLQFLEEGETWKFDDIGELRGKSEEED

Specific function: Unknown

COG id: COG0431

COG function: function code R; Predicted flavoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ssuE family [H]

Homologues:

Organism=Escherichia coli, GI1790149, Length=177, Percent_Identity=31.0734463276836, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005025 [H]

Pfam domain/function: PF03358 FMN_red [H]

EC number: NA

Molecular weight: Translated: 30891; Mature: 30891

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIAIVGTNASFSYNRKLLWYMKKHFTKEAQIEIVEITDLPLFSEDIREIPEGVQKIAE
CEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH
AIREEDGLIFSTPEYDHAITAALKSLIEWLSWIKPQPLNSLPVMIVGVSLGNMGTVFAQE
HHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHH
NLRQILSSPGLDAFVLPSNQFLLGRAAEAFNQQDELIDERTISWLEHCFNNFMIYSKTLK
HHHHHHCCCCCCEEEECCCCEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHCEEEEECCCC
PMRLPSLKKENNKEIIESEESKNSTETDEVWWTKETNQGLPVLSDADTGASEYEEVIEPE
CCCCCCCCCCCCHHHHHCHHCCCCCCCCCEEEECCCCCCCCEEECCCCCHHHHHHHHCCC
NSAYLQFLEEGETWKFDDIGELRGKSEEED
CHHHHHHHHCCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MKFIAIVGTNASFSYNRKLLWYMKKHFTKEAQIEIVEITDLPLFSEDIREIPEGVQKIAE
CEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH
AIREEDGLIFSTPEYDHAITAALKSLIEWLSWIKPQPLNSLPVMIVGVSLGNMGTVFAQE
HHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHH
NLRQILSSPGLDAFVLPSNQFLLGRAAEAFNQQDELIDERTISWLEHCFNNFMIYSKTLK
HHHHHHCCCCCCEEEECCCCEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHCEEEEECCCC
PMRLPSLKKENNKEIIESEESKNSTETDEVWWTKETNQGLPVLSDADTGASEYEEVIEPE
CCCCCCCCCCCCHHHHHCHHCCCCCCCCCEEEECCCCCCCCEEECCCCCHHHHHHHHCCC
NSAYLQFLEEGETWKFDDIGELRGKSEEED
CHHHHHHHHCCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]