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The map label for this gene is recR

Identifier: 15672322

GI number: 15672322

Start: 340013

End: 340609

Strand: Direct

Name: recR

Synonym: L0265

Alternate gene names: 15672322

Gene position: 340013-340609 (Clockwise)

Preceding gene: 15672321

Following gene: 15672323

Centisome position: 14.37

GC content: 38.86

Gene sequence:

>597_bases
ATGTATTATCCTGAACCTATTGCTCGCCTGATTGAGTCGTTTTCAAAATTACCAGGGATTGGTCAAAAAACAGCGACTCG
ATTGGCTTTTTATACGATTGGCATGGAAGATCAAGATGTCAATGAATTTGCAAAAAATCTTCTTTCAGCAAAACGGGATT
TGAGTTTTTGCTCGATTTGTGGGAATTTAACAGAAAGTGATCCTTGCGCCATTTGTACCGACCCAACGCGTGATCGAACA
ACTATATTGGTCGTTGAAGAATCTAAAGATGTTCTTGCTATGGAAAAAATTCGGGAATATCGAGGACTTTATCATGTTTT
GCATGGTACGATTAGTCCAATGAATGGGATTTCTCCTGATGAAATTAATGTTAAAACATTGATTACAAGATTAATGGATT
CAGAGGTTAAAGAAGTGATCATCGCAACTAATGCCACTTCTGACGGAGAAGCAACCGCCATGTATCTGGCTCGAATGATT
AAGCCTGCAGGAATTAAAGTGACTCGCTTGGCTCGTGGATTAGCTGTAGGCTCTGATATAGAATACGCAGATGAAATTAC
TTTATCAAAAGCGGTAGAGAATCGGTTGGAAATTTGA

Upstream 100 bases:

>100_bases
AGTGATTGAGAATTCTATCACCTTTCCTTTTCATTTTCAGTCTTTTATAGTAAAATTAATAAATTGAATAAAATATTTAC
AAGTGAAGAATTGGTGAAAT

Downstream 100 bases:

>100_bases
TTTTTTCTGTGGTAAAATAAAAAAGACAATTACTGACAGAATTGTATTGTAAAAATATCGCATGCTGTCAGTAAAAAGAA
GTGTCTGACAAAGCTGTCAG

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSICGNLTESDPCAICTDPTRDRT
TILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMI
KPAGIKVTRLARGLAVGSDIEYADEITLSKAVENRLEI

Sequences:

>Translated_198_residues
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSICGNLTESDPCAICTDPTRDRT
TILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMI
KPAGIKVTRLARGLAVGSDIEYADEITLSKAVENRLEI
>Mature_198_residues
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSICGNLTESDPCAICTDPTRDRT
TILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMI
KPAGIKVTRLARGLAVGSDIEYADEITLSKAVENRLEI

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=193, Percent_Identity=36.7875647668394, Blast_Score=140, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_LACLA (Q9CIL6)

Other databases:

- EMBL:   AE005176
- PIR:   D86667
- RefSeq:   NP_266496.1
- ProteinModelPortal:   Q9CIL6
- SMR:   Q9CIL6
- GeneID:   1113951
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L0265
- NMPDR:   fig|272623.1.peg.348
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   LLAC272623:L0265-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21909; Mature: 21909

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSIC
CCCCHHHHHHHHHHHHCCCCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHH
GNLTESDPCAICTDPTRDRTTILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPD
CCCCCCCCCEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EINVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMIKPAGIKVTRLARGLAVGSDI
CCHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
EYADEITLSKAVENRLEI
CHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSIC
CCCCHHHHHHHHHHHHCCCCCHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHH
GNLTESDPCAICTDPTRDRTTILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPD
CCCCCCCCCEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EINVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMIKPAGIKVTRLARGLAVGSDI
CCHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
EYADEITLSKAVENRLEI
CHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471