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The map label for this gene is ycfF

Identifier: 15672240

GI number: 15672240

Start: 256200

End: 257471

Strand: Reverse

Name: ycfF

Synonym: L56208

Alternate gene names: 15672240

Gene position: 257471-256200 (Counterclockwise)

Preceding gene: 30023985

Following gene: 15672234

Centisome position: 10.88

GC content: 38.6

Gene sequence:

>1272_bases
ATGACAAAATCAGCTAAAACATTTGACGTTATTGTTGTTGGCGCAGGCCCTTCTGGAATGATGGCTGCCATCTCAGCCGC
GCAAAATGGAGCAAAAGTTGCTCTTATTGATAAAAATAAAAAAGTCGGAAAAAAATTATTAATGACAGGTGGCGGACGCT
GTAATGTGACAAATGCCCGTTCTGTTGACGAAATATTAACAAATGTTCCTGGAAATGGTCGTTTTCTTCATTCAGCCTTT
TCTCAATTTTCCAACCTTGATATTATCGAATTTTTTGAAAGCAATGGTGTTAAATTAAAAGAAGAAGACCACGGGCGCAT
GTTCCCTATAACCGACAAATCAAAAACAATTGTTGATGCCCTCTTTAATAAAATTTTGAGTCTCCATGTTTCTTATTTTC
CAAGCCAAGCAGTTGATAAGCTTCTCATTGAAAACGGAGCGGTAATTGGTCTTGAAACGGATAGCGAGAGCTTTTTAAGC
CCTACAATTATCCTCTCAACAGGCGGACGCGCTTATCCTTCCACAGGTTCAACTGGTGATGGCTATCGTTTAGCACGCTC
AGCAGGGCATAGTATTTCACAACTCTATGCCACTGAATCTGCCCTTATTTCTGACGAACCATTCATTTTAGACAAAAGTC
TTCAAGGCATTTCCCTACGCGAAATCAAACTCTCAGTACTCAATTCTAAGGGAAAAGCAATCATCTCTCATCAGCATGAT
TTATTATTTACGCATTTCGGAATTTCTGGTCCAGCTGCTATGCGTTGTTCAAGTTTCATTAACCAACTTCTTGCTAAAGG
TGAAAAAATGGTCACAGTCAGCTTAGACCAATTCCCCGAAAAAAAGTTGGGCTCTTTGAAAAATGAACTGACTAGCCTTT
CTAAAACAGATAAATCAATTAAAAATGCCTTCTCAGGATTGACCCAAGAACGTATGCTTCTATTTATCCTTGAAAAAGCT
GGAATTGACCCTAGTCTTTCTGCCAAGACGCTATCTGAGCAGCAAATTGATAAAATCGCTAGTCTTTTCAAAAATTGGCA
AATCACAATTAGCAAAACTTTACCAATTGAGAAATCTTTTGTAACAGGTGGCGGTGTTTCTCTCAAAGAAATAAATCCTA
AAAGTATGGAGAGTAAACAAACCCAAGGTTTATTCATGACCGGTGAACTTTTAGATATTAATGGATACACTGGCGGTTAT
AATATTACCTGCGCCTTTGTGACAGGTTTTGTTGCTGGAAAACACGCTGCCCAAATCGCATCTTATTTCTAA

Upstream 100 bases:

>100_bases
AATATCAATATTTAAAAGCCTTATCGCTCGCTGAATTTAAATTTACTATTTTTCAATACTCTTTCCCCTATTTCTGCTCA
CATCATGTTAAAATTAAAGC

Downstream 100 bases:

>100_bases
CAATAAGTCAGCCCTAGCTCAGGCTTGCACATTCTTTATAGAAATGGTACTATATTAAAGTACTGTTTTGCGGTGGTGGC
GGAATTGGCAGACGCGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MTKSAKTFDVIVVGAGPSGMMAAISAAQNGAKVALIDKNKKVGKKLLMTGGGRCNVTNARSVDEILTNVPGNGRFLHSAF
SQFSNLDIIEFFESNGVKLKEEDHGRMFPITDKSKTIVDALFNKILSLHVSYFPSQAVDKLLIENGAVIGLETDSESFLS
PTIILSTGGRAYPSTGSTGDGYRLARSAGHSISQLYATESALISDEPFILDKSLQGISLREIKLSVLNSKGKAIISHQHD
LLFTHFGISGPAAMRCSSFINQLLAKGEKMVTVSLDQFPEKKLGSLKNELTSLSKTDKSIKNAFSGLTQERMLLFILEKA
GIDPSLSAKTLSEQQIDKIASLFKNWQITISKTLPIEKSFVTGGGVSLKEINPKSMESKQTQGLFMTGELLDINGYTGGY
NITCAFVTGFVAGKHAAQIASYF

Sequences:

>Translated_423_residues
MTKSAKTFDVIVVGAGPSGMMAAISAAQNGAKVALIDKNKKVGKKLLMTGGGRCNVTNARSVDEILTNVPGNGRFLHSAF
SQFSNLDIIEFFESNGVKLKEEDHGRMFPITDKSKTIVDALFNKILSLHVSYFPSQAVDKLLIENGAVIGLETDSESFLS
PTIILSTGGRAYPSTGSTGDGYRLARSAGHSISQLYATESALISDEPFILDKSLQGISLREIKLSVLNSKGKAIISHQHD
LLFTHFGISGPAAMRCSSFINQLLAKGEKMVTVSLDQFPEKKLGSLKNELTSLSKTDKSIKNAFSGLTQERMLLFILEKA
GIDPSLSAKTLSEQQIDKIASLFKNWQITISKTLPIEKSFVTGGGVSLKEINPKSMESKQTQGLFMTGELLDINGYTGGY
NITCAFVTGFVAGKHAAQIASYF
>Mature_422_residues
TKSAKTFDVIVVGAGPSGMMAAISAAQNGAKVALIDKNKKVGKKLLMTGGGRCNVTNARSVDEILTNVPGNGRFLHSAFS
QFSNLDIIEFFESNGVKLKEEDHGRMFPITDKSKTIVDALFNKILSLHVSYFPSQAVDKLLIENGAVIGLETDSESFLSP
TIILSTGGRAYPSTGSTGDGYRLARSAGHSISQLYATESALISDEPFILDKSLQGISLREIKLSVLNSKGKAIISHQHDL
LFTHFGISGPAAMRCSSFINQLLAKGEKMVTVSLDQFPEKKLGSLKNELTSLSKTDKSIKNAFSGLTQERMLLFILEKAG
IDPSLSAKTLSEQQIDKIASLFKNWQITISKTLPIEKSFVTGGGVSLKEINPKSMESKQTQGLFMTGELLDINGYTGGYN
ITCAFVTGFVAGKHAAQIASYF

Specific function: Unknown

COG id: COG2081

COG function: function code R; Predicted flavoproteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI2367234, Length=429, Percent_Identity=30.3030303030303, Blast_Score=163, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004792
- InterPro:   IPR013027 [H]

Pfam domain/function: PF03486 HI0933_like [H]

EC number: NA

Molecular weight: Translated: 45554; Mature: 45423

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSAKTFDVIVVGAGPSGMMAAISAAQNGAKVALIDKNKKVGKKLLMTGGGRCNVTNAR
CCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCEEECCCCC
SVDEILTNVPGNGRFLHSAFSQFSNLDIIEFFESNGVKLKEEDHGRMFPITDKSKTIVDA
CHHHHHHCCCCCCEEHHHHHHHHCCCCEEEECCCCCCEEEECCCCCEEECCCCHHHHHHH
LFNKILSLHVSYFPSQAVDKLLIENGAVIGLETDSESFLSPTIILSTGGRAYPSTGSTGD
HHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCC
GYRLARSAGHSISQLYATESALISDEPFILDKSLQGISLREIKLSVLNSKGKAIISHQHD
CHHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEHEEEEEEECCCCCEEEECCCC
LLFTHFGISGPAAMRCSSFINQLLAKGEKMVTVSLDQFPEKKLGSLKNELTSLSKTDKSI
EEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHH
KNAFSGLTQERMLLFILEKAGIDPSLSAKTLSEQQIDKIASLFKNWQITISKTLPIEKSF
HHHHHCCCHHHHHEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCE
VTGGGVSLKEINPKSMESKQTQGLFMTGELLDINGYTGGYNITCAFVTGFVAGKHAAQIA
ECCCCEEEECCCCHHHCCHHCCCEEEECEEEEECCCCCCCEEEEHEEHHHHHHHHHHHHH
SYF
HCC
>Mature Secondary Structure 
TKSAKTFDVIVVGAGPSGMMAAISAAQNGAKVALIDKNKKVGKKLLMTGGGRCNVTNAR
CCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCEEECCCCC
SVDEILTNVPGNGRFLHSAFSQFSNLDIIEFFESNGVKLKEEDHGRMFPITDKSKTIVDA
CHHHHHHCCCCCCEEHHHHHHHHCCCCEEEECCCCCCEEEECCCCCEEECCCCHHHHHHH
LFNKILSLHVSYFPSQAVDKLLIENGAVIGLETDSESFLSPTIILSTGGRAYPSTGSTGD
HHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCC
GYRLARSAGHSISQLYATESALISDEPFILDKSLQGISLREIKLSVLNSKGKAIISHQHD
CHHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCCCEEHEEEEEEECCCCCEEEECCCC
LLFTHFGISGPAAMRCSSFINQLLAKGEKMVTVSLDQFPEKKLGSLKNELTSLSKTDKSI
EEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHH
KNAFSGLTQERMLLFILEKAGIDPSLSAKTLSEQQIDKIASLFKNWQITISKTLPIEKSF
HHHHHCCCHHHHHEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCE
VTGGGVSLKEINPKSMESKQTQGLFMTGELLDINGYTGGYNITCAFVTGFVAGKHAAQIA
ECCCCEEEECCCCHHHCCHHCCCEEEECEEEEECCCCCCCEEEEHEEHHHHHHHHHHHHH
SYF
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]