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The map label for this gene is rps8e

Identifier: 15668854

GI number: 15668854

Start: 599254

End: 599643

Strand: Direct

Name: rps8e

Synonym: MJ0673

Alternate gene names: 15668854

Gene position: 599254-599643 (Clockwise)

Preceding gene: 15668848

Following gene: 15668855

Centisome position: 35.99

GC content: 35.38

Gene sequence:

>390_bases
ATGAGTGTATGGCAAGGAAGAAGTAGAAGAAAACCAACAGGTGGGTTGTATAGACCAGCGAGAAAAAAGAGAAAATATGA
AATGGGTAGAGAACCAATAGAAACACACGTAGCAGAAGAGGCATTTAAAATAAAAAAGGTTAGAACAAGAGGAGGAAACT
TAAAGGTTAAGGTTGTTAGAACAGGATTTGCTAACGTATTAGACCCAGAAACAGGAACTTGTAAGAAAGTTAAGATAATA
ACAGTTAGAGAAAACAAGGCAAACATCCACTATGTCAGAAGAAACGTTATAACAAAAGGAGCAATTATTGAAACAGAGAT
TGGATTGGCAAAAGTTACATCAAGACCTGGGCAGGATGGAACTGTTAATGCAATATTAATTAAGGAATAA

Upstream 100 bases:

>100_bases
AAGTATTTGGAATAAACTAACCAAAAGGCATGGAAATAATAAAATAATAAGAAAGAAATCCAGTTAAAAAATATTAAAAA
CAATTATTACAGGTGTTAAT

Downstream 100 bases:

>100_bases
ATTTTTCAAGCTTAATTTTTAATTTTTTATACTTCATATAATTTATCTATTTAAATTAATTACTCAACTGATGTGAGATT
ATGAAACTTGGTAGATATTT

Product: 30S ribosomal protein S8e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSVWQGRSRRKPTGGLYRPARKKRKYEMGREPIETHVAEEAFKIKKVRTRGGNLKVKVVRTGFANVLDPETGTCKKVKII
TVRENKANIHYVRRNVITKGAIIETEIGLAKVTSRPGQDGTVNAILIKE

Sequences:

>Translated_129_residues
MSVWQGRSRRKPTGGLYRPARKKRKYEMGREPIETHVAEEAFKIKKVRTRGGNLKVKVVRTGFANVLDPETGTCKKVKII
TVRENKANIHYVRRNVITKGAIIETEIGLAKVTSRPGQDGTVNAILIKE
>Mature_128_residues
SVWQGRSRRKPTGGLYRPARKKRKYEMGREPIETHVAEEAFKIKKVRTRGGNLKVKVVRTGFANVLDPETGTCKKVKIIT
VRENKANIHYVRRNVITKGAIIETEIGLAKVTSRPGQDGTVNAILIKE

Specific function: Unknown

COG id: COG2007

COG function: function code J; Ribosomal protein S8E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S8e family

Homologues:

Organism=Saccharomyces cerevisiae, GI6320949, Length=100, Percent_Identity=39, Blast_Score=63, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6319399, Length=100, Percent_Identity=39, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS8E_METJA (P54055)

Other databases:

- EMBL:   L77117
- PIR:   A64384
- RefSeq:   NP_247657.1
- ProteinModelPortal:   P54055
- GeneID:   1451539
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0673
- NMPDR:   fig|243232.1.peg.694
- TIGR:   MJ0673
- HOGENOM:   HBG745393
- OMA:   GGNRKVR
- ProtClustDB:   PRK04049
- BioCyc:   MJAN243232:MJ_0673-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00029
- InterPro:   IPR020919
- InterPro:   IPR001047
- InterPro:   IPR022309
- InterPro:   IPR018283
- PANTHER:   PTHR10394:SF2
- TIGRFAMs:   TIGR00307

Pfam domain/function: PF01201 Ribosomal_S8e

EC number: NA

Molecular weight: Translated: 14539; Mature: 14408

Theoretical pI: Translated: 11.32; Mature: 11.32

Prosite motif: PS01193 RIBOSOMAL_S8E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVWQGRSRRKPTGGLYRPARKKRKYEMGREPIETHVAEEAFKIKKVRTRGGNLKVKVVR
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCEEEEEEE
TGFANVLDPETGTCKKVKIITVRENKANIHYVRRNVITKGAIIETEIGLAKVTSRPGQDG
CCCCHHCCCCCCCCEEEEEEEEECCCCCEEEEEHHHHCCCCEEEECCCEEEECCCCCCCC
TVNAILIKE
CEEEEEEEC
>Mature Secondary Structure 
SVWQGRSRRKPTGGLYRPARKKRKYEMGREPIETHVAEEAFKIKKVRTRGGNLKVKVVR
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCEEEEEEE
TGFANVLDPETGTCKKVKIITVRENKANIHYVRRNVITKGAIIETEIGLAKVTSRPGQDG
CCCCHHCCCCCCCCEEEEEEEEECCCCCEEEEEHHHHCCCCEEEECCCEEEECCCCCCCC
TVNAILIKE
CEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087