Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668823

Identifier: 15668823

GI number: 15668823

Start: 571452

End: 572453

Strand: Direct

Name: 15668823

Synonym: MJ0642

Alternate gene names: NA

Gene position: 571452-572453 (Clockwise)

Preceding gene: 15668817

Following gene: 15668824

Centisome position: 34.32

GC content: 26.55

Gene sequence:

>1002_bases
GTGATAACTATGGCATTAAATTTTTACAAATACTATAGTCGGCAAATAAAGTATGCCTTACACTTCAATATTCTAAATAA
TTCAATAATTGATGCTGAAAATAAATACATAAACTTTCAAAAACCATTAAAAAATGTTATTGTTTCAGATTCTATGTTTA
TAGACACTGCATATCTCTTAAAGATTAAAAAGATGATTAAAAGCATTAAAGGAGTTTTTTGGGCTGATTTTGTGTTAAAA
AAATATTATCCTCTATACAGTGATTATTTAAAGGGGAAAATATCAAATGTTGGAACAGATGGAAAAATAAACTATGGAGA
AATCTTAAATATAAATCCGGACATGATATTTTTAATTGATTGGAATATATTCAATCCATTATCTAAGTGGTTGGATAAAA
ATAACATTCCCTACACAAAAACTGGAAACTACAAAGAACCAAAGTTTTTGGGAAAAATGGAGTGGATAAAGTTTTACGCC
TCATTTTACAATAAATATAAAAAAGCTGAGAAGGTATTTAACAAGATAATTGAAGAAAAAAGAAGGATTTTAAAATCTTT
AAATAGTAGAAGCATAAAATATAAACCAGTTGTGGCATTTTTTGGCTATCATAAAAACCAACCATACATCTATGGAAAAT
CCCACTATATTCCCAATTGGATTAGGGAAATAAAAGGCAATTACCTATTTGAAAATGTTGAAGGGACTAACTATCACTAT
ATTGATAGAAAAATATTTAACAGCAGAGCAAAATATGCTGATGTGTGTATATTAGACACAATGGGAGAGGATATTGACAT
AAAAGAATTGTTAAAAAACAATCCTCATTTTTTAAAGTTTAGAGCGTATAAAAATAAGAGATTTTATATAACAACCAAAG
ATTACCTAAAATTTGAAACACTAAAGTGCTCTGAAGTTATGGAGGAATATGTGAAAATTATCCACCCAAAAATTTATCAA
AATGGAGATAATGATTTAAAATACTTTATAAAAGTTGTTTAA

Upstream 100 bases:

>100_bases
GATATTTCCTAATTATCATTTTAAAGTTTTTAAGGTTTTTGCAGAAAGAATAAATATAAAGAAATCTTAAATAATTATTA
AGTTAATTTTAATAACTGAT

Downstream 100 bases:

>100_bases
AATAAATTTGGGTGATTTTATGCTGATAAGGCCAAGAAGATTAAGAAAAAACCAAAAAATTAGAGATTTAGTTAGAGAAA
CTATATTAACAAAAAATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MITMALNFYKYYSRQIKYALHFNILNNSIIDAENKYINFQKPLKNVIVSDSMFIDTAYLLKIKKMIKSIKGVFWADFVLK
KYYPLYSDYLKGKISNVGTDGKINYGEILNINPDMIFLIDWNIFNPLSKWLDKNNIPYTKTGNYKEPKFLGKMEWIKFYA
SFYNKYKKAEKVFNKIIEEKRRILKSLNSRSIKYKPVVAFFGYHKNQPYIYGKSHYIPNWIREIKGNYLFENVEGTNYHY
IDRKIFNSRAKYADVCILDTMGEDIDIKELLKNNPHFLKFRAYKNKRFYITTKDYLKFETLKCSEVMEEYVKIIHPKIYQ
NGDNDLKYFIKVV

Sequences:

>Translated_333_residues
MITMALNFYKYYSRQIKYALHFNILNNSIIDAENKYINFQKPLKNVIVSDSMFIDTAYLLKIKKMIKSIKGVFWADFVLK
KYYPLYSDYLKGKISNVGTDGKINYGEILNINPDMIFLIDWNIFNPLSKWLDKNNIPYTKTGNYKEPKFLGKMEWIKFYA
SFYNKYKKAEKVFNKIIEEKRRILKSLNSRSIKYKPVVAFFGYHKNQPYIYGKSHYIPNWIREIKGNYLFENVEGTNYHY
IDRKIFNSRAKYADVCILDTMGEDIDIKELLKNNPHFLKFRAYKNKRFYITTKDYLKFETLKCSEVMEEYVKIIHPKIYQ
NGDNDLKYFIKVV
>Mature_333_residues
MITMALNFYKYYSRQIKYALHFNILNNSIIDAENKYINFQKPLKNVIVSDSMFIDTAYLLKIKKMIKSIKGVFWADFVLK
KYYPLYSDYLKGKISNVGTDGKINYGEILNINPDMIFLIDWNIFNPLSKWLDKNNIPYTKTGNYKEPKFLGKMEWIKFYA
SFYNKYKKAEKVFNKIIEEKRRILKSLNSRSIKYKPVVAFFGYHKNQPYIYGKSHYIPNWIREIKGNYLFENVEGTNYHY
IDRKIFNSRAKYADVCILDTMGEDIDIKELLKNNPHFLKFRAYKNKRFYITTKDYLKFETLKCSEVMEEYVKIIHPKIYQ
NGDNDLKYFIKVV

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y642_METJA (Q58059)

Other databases:

- EMBL:   L77117
- PIR:   B64380
- RefSeq:   NP_247626.1
- ProteinModelPortal:   Q58059
- GeneID:   1451508
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0642
- NMPDR:   fig|243232.1.peg.663
- TIGR:   MJ0642
- OMA:   YLFENVE
- ProtClustDB:   CLSK2517637
- BioCyc:   MJAN243232:MJ_0642-MONOMER
- InterPro:   IPR002491

Pfam domain/function: PF01497 Peripla_BP_2

EC number: NA

Molecular weight: Translated: 40006; Mature: 40006

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITMALNFYKYYSRQIKYALHFNILNNSIIDAENKYINFQKPLKNVIVSDSMFIDTAYLL
CEEEEEHHHHHHHHHEEEEEEEEECCCCEECCCCCEEEHHHHHHHHHHCCCHHHHHHHHH
KIKKMIKSIKGVFWADFVLKKYYPLYSDYLKGKISNVGTDGKINYGEILNINPDMIFLID
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHCCCCCCCCCCCCEEECCCCEEEEEE
WNIFNPLSKWLDKNNIPYTKTGNYKEPKFLGKMEWIKFYASFYNKYKKAEKVFNKIIEEK
CCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRILKSLNSRSIKYKPVVAFFGYHKNQPYIYGKSHYIPNWIREIKGNYLFENVEGTNYHY
HHHHHHHCCCCEEECEEEEEEECCCCCCEEEECCCCCHHHHHHHCCCEEEECCCCCCEEE
IDRKIFNSRAKYADVCILDTMGEDIDIKELLKNNPHFLKFRAYKNKRFYITTKDYLKFET
EHHHHHHCCCCHHEEEEEECCCCCCCHHHHHCCCCCEEEEEEECCCEEEEEEHHHHEEEE
LKCSEVMEEYVKIIHPKIYQNGDNDLKYFIKVV
ECHHHHHHHHHHHHCCHHHCCCCCCEEEEEEEC
>Mature Secondary Structure
MITMALNFYKYYSRQIKYALHFNILNNSIIDAENKYINFQKPLKNVIVSDSMFIDTAYLL
CEEEEEHHHHHHHHHEEEEEEEEECCCCEECCCCCEEEHHHHHHHHHHCCCHHHHHHHHH
KIKKMIKSIKGVFWADFVLKKYYPLYSDYLKGKISNVGTDGKINYGEILNINPDMIFLID
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHCCCCCCCCCCCCEEECCCCEEEEEE
WNIFNPLSKWLDKNNIPYTKTGNYKEPKFLGKMEWIKFYASFYNKYKKAEKVFNKIIEEK
CCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRILKSLNSRSIKYKPVVAFFGYHKNQPYIYGKSHYIPNWIREIKGNYLFENVEGTNYHY
HHHHHHHCCCCEEECEEEEEEECCCCCCEEEECCCCCHHHHHHHCCCEEEECCCCCCEEE
IDRKIFNSRAKYADVCILDTMGEDIDIKELLKNNPHFLKFRAYKNKRFYITTKDYLKFET
EHHHHHHCCCCHHEEEEEECCCCCCCHHHHHCCCCCEEEEEEECCCEEEEEEHHHHEEEE
LKCSEVMEEYVKIIHPKIYQNGDNDLKYFIKVV
ECHHHHHHHHHHHHCCHHHCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087