Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668823
Identifier: 15668823
GI number: 15668823
Start: 571452
End: 572453
Strand: Direct
Name: 15668823
Synonym: MJ0642
Alternate gene names: NA
Gene position: 571452-572453 (Clockwise)
Preceding gene: 15668817
Following gene: 15668824
Centisome position: 34.32
GC content: 26.55
Gene sequence:
>1002_bases GTGATAACTATGGCATTAAATTTTTACAAATACTATAGTCGGCAAATAAAGTATGCCTTACACTTCAATATTCTAAATAA TTCAATAATTGATGCTGAAAATAAATACATAAACTTTCAAAAACCATTAAAAAATGTTATTGTTTCAGATTCTATGTTTA TAGACACTGCATATCTCTTAAAGATTAAAAAGATGATTAAAAGCATTAAAGGAGTTTTTTGGGCTGATTTTGTGTTAAAA AAATATTATCCTCTATACAGTGATTATTTAAAGGGGAAAATATCAAATGTTGGAACAGATGGAAAAATAAACTATGGAGA AATCTTAAATATAAATCCGGACATGATATTTTTAATTGATTGGAATATATTCAATCCATTATCTAAGTGGTTGGATAAAA ATAACATTCCCTACACAAAAACTGGAAACTACAAAGAACCAAAGTTTTTGGGAAAAATGGAGTGGATAAAGTTTTACGCC TCATTTTACAATAAATATAAAAAAGCTGAGAAGGTATTTAACAAGATAATTGAAGAAAAAAGAAGGATTTTAAAATCTTT AAATAGTAGAAGCATAAAATATAAACCAGTTGTGGCATTTTTTGGCTATCATAAAAACCAACCATACATCTATGGAAAAT CCCACTATATTCCCAATTGGATTAGGGAAATAAAAGGCAATTACCTATTTGAAAATGTTGAAGGGACTAACTATCACTAT ATTGATAGAAAAATATTTAACAGCAGAGCAAAATATGCTGATGTGTGTATATTAGACACAATGGGAGAGGATATTGACAT AAAAGAATTGTTAAAAAACAATCCTCATTTTTTAAAGTTTAGAGCGTATAAAAATAAGAGATTTTATATAACAACCAAAG ATTACCTAAAATTTGAAACACTAAAGTGCTCTGAAGTTATGGAGGAATATGTGAAAATTATCCACCCAAAAATTTATCAA AATGGAGATAATGATTTAAAATACTTTATAAAAGTTGTTTAA
Upstream 100 bases:
>100_bases GATATTTCCTAATTATCATTTTAAAGTTTTTAAGGTTTTTGCAGAAAGAATAAATATAAAGAAATCTTAAATAATTATTA AGTTAATTTTAATAACTGAT
Downstream 100 bases:
>100_bases AATAAATTTGGGTGATTTTATGCTGATAAGGCCAAGAAGATTAAGAAAAAACCAAAAAATTAGAGATTTAGTTAGAGAAA CTATATTAACAAAAAATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MITMALNFYKYYSRQIKYALHFNILNNSIIDAENKYINFQKPLKNVIVSDSMFIDTAYLLKIKKMIKSIKGVFWADFVLK KYYPLYSDYLKGKISNVGTDGKINYGEILNINPDMIFLIDWNIFNPLSKWLDKNNIPYTKTGNYKEPKFLGKMEWIKFYA SFYNKYKKAEKVFNKIIEEKRRILKSLNSRSIKYKPVVAFFGYHKNQPYIYGKSHYIPNWIREIKGNYLFENVEGTNYHY IDRKIFNSRAKYADVCILDTMGEDIDIKELLKNNPHFLKFRAYKNKRFYITTKDYLKFETLKCSEVMEEYVKIIHPKIYQ NGDNDLKYFIKVV
Sequences:
>Translated_333_residues MITMALNFYKYYSRQIKYALHFNILNNSIIDAENKYINFQKPLKNVIVSDSMFIDTAYLLKIKKMIKSIKGVFWADFVLK KYYPLYSDYLKGKISNVGTDGKINYGEILNINPDMIFLIDWNIFNPLSKWLDKNNIPYTKTGNYKEPKFLGKMEWIKFYA SFYNKYKKAEKVFNKIIEEKRRILKSLNSRSIKYKPVVAFFGYHKNQPYIYGKSHYIPNWIREIKGNYLFENVEGTNYHY IDRKIFNSRAKYADVCILDTMGEDIDIKELLKNNPHFLKFRAYKNKRFYITTKDYLKFETLKCSEVMEEYVKIIHPKIYQ NGDNDLKYFIKVV >Mature_333_residues MITMALNFYKYYSRQIKYALHFNILNNSIIDAENKYINFQKPLKNVIVSDSMFIDTAYLLKIKKMIKSIKGVFWADFVLK KYYPLYSDYLKGKISNVGTDGKINYGEILNINPDMIFLIDWNIFNPLSKWLDKNNIPYTKTGNYKEPKFLGKMEWIKFYA SFYNKYKKAEKVFNKIIEEKRRILKSLNSRSIKYKPVVAFFGYHKNQPYIYGKSHYIPNWIREIKGNYLFENVEGTNYHY IDRKIFNSRAKYADVCILDTMGEDIDIKELLKNNPHFLKFRAYKNKRFYITTKDYLKFETLKCSEVMEEYVKIIHPKIYQ NGDNDLKYFIKVV
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y642_METJA (Q58059)
Other databases:
- EMBL: L77117 - PIR: B64380 - RefSeq: NP_247626.1 - ProteinModelPortal: Q58059 - GeneID: 1451508 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0642 - NMPDR: fig|243232.1.peg.663 - TIGR: MJ0642 - OMA: YLFENVE - ProtClustDB: CLSK2517637 - BioCyc: MJAN243232:MJ_0642-MONOMER - InterPro: IPR002491
Pfam domain/function: PF01497 Peripla_BP_2
EC number: NA
Molecular weight: Translated: 40006; Mature: 40006
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITMALNFYKYYSRQIKYALHFNILNNSIIDAENKYINFQKPLKNVIVSDSMFIDTAYLL CEEEEEHHHHHHHHHEEEEEEEEECCCCEECCCCCEEEHHHHHHHHHHCCCHHHHHHHHH KIKKMIKSIKGVFWADFVLKKYYPLYSDYLKGKISNVGTDGKINYGEILNINPDMIFLID HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHCCCCCCCCCCCCEEECCCCEEEEEE WNIFNPLSKWLDKNNIPYTKTGNYKEPKFLGKMEWIKFYASFYNKYKKAEKVFNKIIEEK CCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRILKSLNSRSIKYKPVVAFFGYHKNQPYIYGKSHYIPNWIREIKGNYLFENVEGTNYHY HHHHHHHCCCCEEECEEEEEEECCCCCCEEEECCCCCHHHHHHHCCCEEEECCCCCCEEE IDRKIFNSRAKYADVCILDTMGEDIDIKELLKNNPHFLKFRAYKNKRFYITTKDYLKFET EHHHHHHCCCCHHEEEEEECCCCCCCHHHHHCCCCCEEEEEEECCCEEEEEEHHHHEEEE LKCSEVMEEYVKIIHPKIYQNGDNDLKYFIKVV ECHHHHHHHHHHHHCCHHHCCCCCCEEEEEEEC >Mature Secondary Structure MITMALNFYKYYSRQIKYALHFNILNNSIIDAENKYINFQKPLKNVIVSDSMFIDTAYLL CEEEEEHHHHHHHHHEEEEEEEEECCCCEECCCCCEEEHHHHHHHHHHCCCHHHHHHHHH KIKKMIKSIKGVFWADFVLKKYYPLYSDYLKGKISNVGTDGKINYGEILNINPDMIFLID HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHCCCCCCCCCCCCEEECCCCEEEEEE WNIFNPLSKWLDKNNIPYTKTGNYKEPKFLGKMEWIKFYASFYNKYKKAEKVFNKIIEEK CCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRILKSLNSRSIKYKPVVAFFGYHKNQPYIYGKSHYIPNWIREIKGNYLFENVEGTNYHY HHHHHHHCCCCEEECEEEEEEECCCCCCEEEECCCCCHHHHHHHCCCEEEECCCCCCEEE IDRKIFNSRAKYADVCILDTMGEDIDIKELLKNNPHFLKFRAYKNKRFYITTKDYLKFET EHHHHHHCCCCHHEEEEEECCCCCCCHHHHHCCCCCEEEEEEECCCEEEEEEHHHHEEEE LKCSEVMEEYVKIIHPKIYQNGDNDLKYFIKVV ECHHHHHHHHHHHHCCHHHCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087