Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668629
Identifier: 15668629
GI number: 15668629
Start: 404961
End: 405284
Strand: Reverse
Name: 15668629
Synonym: MJ0453
Alternate gene names: NA
Gene position: 405284-404961 (Counterclockwise)
Preceding gene: 15668630
Following gene: 15668628
Centisome position: 24.34
GC content: 29.32
Gene sequence:
>324_bases ATGGGATGTATTGATAAGCTAAACTATGAAATTTTGTATAAAGGAGGCTTTAAGGAGTGTGCAGAATATATAAGGAAAAA TTTCAAAAATATCAAAGAGATGGAAGCTGGATATGAGATATTTGAAGGAATTTTTTTAATTGGAATCCCTCCAATTCCAG TTGCCTACGAAGATAATTATGTGATATTCCCTTACACAAAACCATGCTATGGAACGTTTGTTTTAAAAATAAATCTTGAT GAAATAAATAAAGATAAGAAAGAGGAGAAAAAAGAGAAAGATAAAGGCAAAAAAGGTTTATTATCAAGATTAAAGTTCTG GTGA
Upstream 100 bases:
>100_bases TTGATAAAACTCCTCCAGATTTGATAACTGCAATTATAACTGAAAAGGGCATTGTAAAGCCAAATAGGGATGAGATTTTA AAGCTCTTTAGGTAGAGACT
Downstream 100 bases:
>100_bases AATGATGAGTGTCTTAGTTATAGTTGGATGTCCAGAACCTCCAGCTTTAATCCCTTCTGTTTTATATCTAACAAATCAGC TAAAGAAAAAAGGATTTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MGCIDKLNYEILYKGGFKECAEYIRKNFKNIKEMEAGYEIFEGIFLIGIPPIPVAYEDNYVIFPYTKPCYGTFVLKINLD EINKDKKEEKKEKDKGKKGLLSRLKFW
Sequences:
>Translated_107_residues MGCIDKLNYEILYKGGFKECAEYIRKNFKNIKEMEAGYEIFEGIFLIGIPPIPVAYEDNYVIFPYTKPCYGTFVLKINLD EINKDKKEEKKEKDKGKKGLLSRLKFW >Mature_106_residues GCIDKLNYEILYKGGFKECAEYIRKNFKNIKEMEAGYEIFEGIFLIGIPPIPVAYEDNYVIFPYTKPCYGTFVLKINLDE INKDKKEEKKEKDKGKKGLLSRLKFW
Specific function: Unknown
COG id: COG4033
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y453_METJA (Q57895)
Other databases:
- EMBL: L77117 - PIR: E64356 - RefSeq: NP_247427.1 - ProteinModelPortal: Q57895 - SMR: Q57895 - GeneID: 1451314 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0453 - NMPDR: fig|243232.1.peg.464 - TIGR: MJ0453 - HOGENOM: HBG541249 - OMA: FPYTKPC - ProtClustDB: CLSK876194 - BioCyc: MJAN243232:MJ_0453-MONOMER - InterPro: IPR012031 - PIRSF: PIRSF006577 - ProDom: PD028584
Pfam domain/function: PF08979 DUF1894
EC number: NA
Molecular weight: Translated: 12603; Mature: 12472
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCIDKLNYEILYKGGFKECAEYIRKNFKNIKEMEAGYEIFEGIFLIGIPPIPVAYEDNY CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCE VIFPYTKPCYGTFVLKINLDEINKDKKEEKKEKDKGKKGLLSRLKFW EEECCCCCCCEEEEEEEEHHHCCCCHHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure GCIDKLNYEILYKGGFKECAEYIRKNFKNIKEMEAGYEIFEGIFLIGIPPIPVAYEDNY CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEECCCE VIFPYTKPCYGTFVLKINLDEINKDKKEEKKEKDKGKKGLLSRLKFW EEECCCCCCCEEEEEEEEHHHCCCCHHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087