Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
---|---|
Accession | NC_000909 |
Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668628
Identifier: 15668628
GI number: 15668628
Start: 404513
End: 404959
Strand: Reverse
Name: 15668628
Synonym: MJ0452
Alternate gene names: NA
Gene position: 404959-404513 (Counterclockwise)
Preceding gene: 15668629
Following gene: 15668623
Centisome position: 24.32
GC content: 33.78
Gene sequence:
>447_bases ATGATGAGTGTCTTAGTTATAGTTGGATGTCCAGAACCTCCAGCTTTAATCCCTTCTGTTTTATATCTAACAAATCAGCT AAAGAAAAAAGGATTTAATGTCATTATAGCTGCAAATCCAGCAGCTTTAAAGCTTTTAGAGGTTGCAGATGATGACAAAT ACTATTTAAAAGGTGTTGGAGCTGTTGATATAGACGGAGGGCTTAGAGGCATTGAAGGTATTAATAAAATTATAAGTTTT GTCCATAACGACGGAGGAGTTAGTTATACTGTAACTTACAAAGCTAAATACAACAAACCTACCTATGCAATTGTCTTTGG AAGGCAGATAAATAAAGATTACGTTGAGACATTAAAAAACAGCAATATAGGGGTTTATACTGCAAGAGCCTTCCATAACC CAATGCCAATTGTAAATAGAATAAAGGAGATTTTAGCAAATCTTTAA
Upstream 100 bases:
>100_bases AAAATAAATCTTGATGAAATAAATAAAGATAAGAAAGAGGAGAAAAAAGAGAAAGATAAAGGCAAAAAAGGTTTATTATC AAGATTAAAGTTCTGGTGAA
Downstream 100 bases:
>100_bases ACTTTTTTAATAACCTCTAAAAACTCATCTACCTTTTTTAAATCTTTCTTTCCACCGTAAGCTTCCAATGAAGAAGATAC ATCTATAGCGTAAGGTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MMSVLVIVGCPEPPALIPSVLYLTNQLKKKGFNVIIAANPAALKLLEVADDDKYYLKGVGAVDIDGGLRGIEGINKIISF VHNDGGVSYTVTYKAKYNKPTYAIVFGRQINKDYVETLKNSNIGVYTARAFHNPMPIVNRIKEILANL
Sequences:
>Translated_148_residues MMSVLVIVGCPEPPALIPSVLYLTNQLKKKGFNVIIAANPAALKLLEVADDDKYYLKGVGAVDIDGGLRGIEGINKIISF VHNDGGVSYTVTYKAKYNKPTYAIVFGRQINKDYVETLKNSNIGVYTARAFHNPMPIVNRIKEILANL >Mature_148_residues MMSVLVIVGCPEPPALIPSVLYLTNQLKKKGFNVIIAANPAALKLLEVADDDKYYLKGVGAVDIDGGLRGIEGINKIISF VHNDGGVSYTVTYKAKYNKPTYAIVFGRQINKDYVETLKNSNIGVYTARAFHNPMPIVNRIKEILANL
Specific function: Unknown
COG id: COG4081
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y452_METJA (Q57894)
Other databases:
- EMBL: L77117 - PIR: D64356 - RefSeq: NP_247426.1 - ProteinModelPortal: Q57894 - SMR: Q57894 - GeneID: 1451313 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0452 - NMPDR: fig|243232.1.peg.463 - TIGR: MJ0452 - HOGENOM: HBG541761 - OMA: HNDAAVN - ProtClustDB: CLSK876193 - BioCyc: MJAN243232:MJ_0452-MONOMER - InterPro: IPR012033 - Gene3D: G3DSA:3.40.50.10160 - PIRSF: PIRSF006600
Pfam domain/function: PF09001 DUF1890; SSF75181 UCP006600
EC number: NA
Molecular weight: Translated: 16226; Mature: 16226
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSVLVIVGCPEPPALIPSVLYLTNQLKKKGFNVIIAANPAALKLLEVADDDKYYLKGVG CCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHEEEEEECCCCCEEEEECC AVDIDGGLRGIEGINKIISFVHNDGGVSYTVTYKAKYNKPTYAIVFGRQINKDYVETLKN EEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHCC SNIGVYTARAFHNPMPIVNRIKEILANL CCCEEEEEHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MMSVLVIVGCPEPPALIPSVLYLTNQLKKKGFNVIIAANPAALKLLEVADDDKYYLKGVG CCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHEEEEEECCCCCEEEEECC AVDIDGGLRGIEGINKIISFVHNDGGVSYTVTYKAKYNKPTYAIVFGRQINKDYVETLKN EEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHCC SNIGVYTARAFHNPMPIVNRIKEILANL CCCEEEEEHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087