Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668623
Identifier: 15668623
GI number: 15668623
Start: 400549
End: 401034
Strand: Reverse
Name: 15668623
Synonym: MJ0447
Alternate gene names: NA
Gene position: 401034-400549 (Counterclockwise)
Preceding gene: 15668628
Following gene: 15668621
Centisome position: 24.09
GC content: 26.75
Gene sequence:
>486_bases ATGAATCTCAATATTAAAGAAATTAAACAAAAAATCAATGAATGGAAAAATAGAGAATGGAGATGGAAAGGAAAAGGAAA AATTGAAATCAGATTTGTTTGTTTAATTGAAAGGGCTGAGAGCTTTAAGGAATTGGTAGATAACTTAGAAATAATCATCT GTGAATATGAAAAAATAAAACAGCTTATTGAAGATAAAGATATAAAAGAAATAGCCAAATTAAATCTATTCTGTGGAAAT AACGTTTATGAAGAAATGTTAAAGGATATTTTAAGTTCAAATAAGTTCATATCTTTAACAATAAGTTTTGATGAGAACAT AGCTTATGTTAAGTATATGGAAAGGGGAAAAGAGGAAGTTGTATATTTAGATGGAAAATCTGCCTATAAGGCCCTACAAA TATTAAAAAATAGATATGAGAATATCTTAAAAAAGCAGATATCAATAATAGAGGACGCTATTCCTTTAACCATCCCATCT CAATAA
Upstream 100 bases:
>100_bases TGTTTGTGTAGCATCAGATTTATATTTTCCCGCATTTGAGGATAAATTAGTTAATCATCAAATAAATATTTTGTTATAGA TTAAAAATTGGTGAATATTT
Downstream 100 bases:
>100_bases TCTTATTATAAACTTTTTCACTTAACCACTCTTCACTTATGTATTTATCATAAACTGGCAATCTCATCTTTAACTTTAAC CCTAACTCCTCAGTCCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNLNIKEIKQKINEWKNREWRWKGKGKIEIRFVCLIERAESFKELVDNLEIIICEYEKIKQLIEDKDIKEIAKLNLFCGN NVYEEMLKDILSSNKFISLTISFDENIAYVKYMERGKEEVVYLDGKSAYKALQILKNRYENILKKQISIIEDAIPLTIPS Q
Sequences:
>Translated_161_residues MNLNIKEIKQKINEWKNREWRWKGKGKIEIRFVCLIERAESFKELVDNLEIIICEYEKIKQLIEDKDIKEIAKLNLFCGN NVYEEMLKDILSSNKFISLTISFDENIAYVKYMERGKEEVVYLDGKSAYKALQILKNRYENILKKQISIIEDAIPLTIPS Q >Mature_161_residues MNLNIKEIKQKINEWKNREWRWKGKGKIEIRFVCLIERAESFKELVDNLEIIICEYEKIKQLIEDKDIKEIAKLNLFCGN NVYEEMLKDILSSNKFISLTISFDENIAYVKYMERGKEEVVYLDGKSAYKALQILKNRYENILKKQISIIEDAIPLTIPS Q
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y447_METJA (Q57889)
Other databases:
- EMBL: L77117 - PIR: G64355 - RefSeq: NP_247421.1 - GeneID: 1451307 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0447 - NMPDR: fig|243232.1.peg.458 - TIGR: MJ0447 - OMA: ERAESFK - ProtClustDB: CLSK2517610 - BioCyc: MJAN243232:MJ_0447-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19126; Mature: 19126
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNIKEIKQKINEWKNREWRWKGKGKIEIRFVCLIERAESFKELVDNLEIIICEYEKIK CCCCHHHHHHHHHHHCCCCEEECCCCEEEEEEEEHHHHHHHHHHHHCCCEEEEECHHHHH QLIEDKDIKEIAKLNLFCGNNVYEEMLKDILSSNKFISLTISFDENIAYVKYMERGKEEV HHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHCCCCEE VYLDGKSAYKALQILKNRYENILKKQISIIEDAIPLTIPSQ EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNLNIKEIKQKINEWKNREWRWKGKGKIEIRFVCLIERAESFKELVDNLEIIICEYEKIK CCCCHHHHHHHHHHHCCCCEEECCCCEEEEEEEEHHHHHHHHHHHHCCCEEEEECHHHHH QLIEDKDIKEIAKLNLFCGNNVYEEMLKDILSSNKFISLTISFDENIAYVKYMERGKEEV HHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHCCCCEE VYLDGKSAYKALQILKNRYENILKKQISIIEDAIPLTIPSQ EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087