Definition | Pasteurella multocida subsp. multocida str. Pm70, complete genome. |
---|---|
Accession | NC_002663 |
Length | 2,257,487 |
Click here to switch to the map view.
The map label for this gene is 15601976
Identifier: 15601976
GI number: 15601976
Start: 135786
End: 136352
Strand: Reverse
Name: 15601976
Synonym: PM0111
Alternate gene names: NA
Gene position: 136352-135786 (Counterclockwise)
Preceding gene: 15601977
Following gene: 15601975
Centisome position: 6.04
GC content: 38.98
Gene sequence:
>567_bases ATGAACGCAGAATTAAAACAAGATCTCACGGAATTTTTACGCCTATCATTAGTCGATGATGAATTTATCGAGCAATATAT TGACGATATTACTGCCCTTCTTGAAACACAAGGAGAATGGGCTGATGGGTATGTGTATTGGCAAGAAAAAGGGATTTTGC CAGAAGATCCTGAACACCAATATTATGATGAGTATTTCGACTGGGATGAAAATGCATTTGTTGTGGATGGGAAAAGTTAC CCAAGCCTGAGTTTGGCAGATATTCTCGAACAACAAGCCCTTTCTAAATTGACTGATTGGAAATTTGATGCAGAAGAATT GGAATATGCGGTCAATAGTATGCTGACCAATAAAATCAAGATCCAATGCCCCGAAGAAACCTATAATGATGCACTCTACC CTTACGTTCAACAAGCACTTGCCCCACAAAATTATACCCTTTGTAATTATTGGAACGGCAATGACAGCTGTTTATTTATG ATTTTCTCCTTTGAGGAATATGAGCGTATTCGAGAGATTGCTGGCAAGTGGAATATTTCGATTTGTGTGGTTGATGGGGG GGAGTAA
Upstream 100 bases:
>100_bases TCAATGTGGTTCAACAATGGTAAGAATTGGGACAGCGATTTTTGGGGCGAGGGATTATTCGAAATAAAGAGCAAATCTTA TTCATAAAAGGTATGTAAAA
Downstream 100 bases:
>100_bases GGTTTACGATTTCATCTATGATATTAGTCTGACTGGTACTTCTCCCACTCTACAAACAACTTCACACTTGGGCGAATTGA CGAAGATTAAGTGTTAGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MNAELKQDLTEFLRLSLVDDEFIEQYIDDITALLETQGEWADGYVYWQEKGILPEDPEHQYYDEYFDWDENAFVVDGKSY PSLSLADILEQQALSKLTDWKFDAEELEYAVNSMLTNKIKIQCPEETYNDALYPYVQQALAPQNYTLCNYWNGNDSCLFM IFSFEEYERIREIAGKWNISICVVDGGE
Sequences:
>Translated_188_residues MNAELKQDLTEFLRLSLVDDEFIEQYIDDITALLETQGEWADGYVYWQEKGILPEDPEHQYYDEYFDWDENAFVVDGKSY PSLSLADILEQQALSKLTDWKFDAEELEYAVNSMLTNKIKIQCPEETYNDALYPYVQQALAPQNYTLCNYWNGNDSCLFM IFSFEEYERIREIAGKWNISICVVDGGE >Mature_188_residues MNAELKQDLTEFLRLSLVDDEFIEQYIDDITALLETQGEWADGYVYWQEKGILPEDPEHQYYDEYFDWDENAFVVDGKSY PSLSLADILEQQALSKLTDWKFDAEELEYAVNSMLTNKIKIQCPEETYNDALYPYVQQALAPQNYTLCNYWNGNDSCLFM IFSFEEYERIREIAGKWNISICVVDGGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y111_PASMU (Q9CPD6)
Other databases:
- EMBL: AE004439 - RefSeq: NP_245048.1 - GeneID: 1243458 - GenomeReviews: AE004439_GR - KEGG: pmu:PM0111 - NMPDR: fig|272843.1.peg.111 - BioCyc: PMUL272843:PM0111-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22067; Mature: 22067
Theoretical pI: Translated: 3.68; Mature: 3.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAELKQDLTEFLRLSLVDDEFIEQYIDDITALLETQGEWADGYVYWQEKGILPEDPEHQ CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCH YYDEYFDWDENAFVVDGKSYPSLSLADILEQQALSKLTDWKFDAEELEYAVNSMLTNKIK HHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEE IQCPEETYNDALYPYVQQALAPQNYTLCNYWNGNDSCLFMIFSFEEYERIREIAGKWNIS EECCCHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECHHHHHHHHHHHCCCCEE ICVVDGGE EEEEECCC >Mature Secondary Structure MNAELKQDLTEFLRLSLVDDEFIEQYIDDITALLETQGEWADGYVYWQEKGILPEDPEHQ CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCH YYDEYFDWDENAFVVDGKSYPSLSLADILEQQALSKLTDWKFDAEELEYAVNSMLTNKIK HHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEE IQCPEETYNDALYPYVQQALAPQNYTLCNYWNGNDSCLFMIFSFEEYERIREIAGKWNIS EECCCHHHCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECHHHHHHHHHHHCCCCEE ICVVDGGE EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100