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The map label for this gene is ychE [H]

Identifier: 15601909

GI number: 15601909

Start: 47349

End: 47975

Strand: Reverse

Name: ychE [H]

Synonym: PM0044

Alternate gene names: 15601909

Gene position: 47975-47349 (Counterclockwise)

Preceding gene: 15601911

Following gene: 15601908

Centisome position: 2.13

GC content: 37.48

Gene sequence:

>627_bases
ATGGATTTTGCGATCTATCTTCAATTCTTTATTGGACTCATCGCTTTAGTTAACCCAATAGGGGTTGTGCCAATTTTCTA
CTCCATGACATCAACCTTGTCAAAAGAGCAACAAAATAGAACCAGTTTCATCACCTGTATTTCTATTAGTGTGATCTTGT
TGGTCAGTTTTTTCTTTGGTAGCTTTATTTTAAATGCATTTCATATCTCAATTGATTCTTTCCGAATTGCTGGTGGGATC
GTGGTGATTTTAATTGCGTTAACCATGATTAACGGAAAAATCGGTGAGCATAAGATGAATAAAGAGGAAAAAAGTGAAAA
CTTCGATGACTACAATAATATTGCGGTCGTCCCCCTTGCCACGCCAATTATGGCAGGCCCCGGGTCGATTAGTGCGACCA
TTGTTTTTAGCTCGACACAAAATAGCCTTATTAACTATTTCTATTCCTCAATTACGATCATCCTGTTTGGTGTAGGCTGT
TATATTTTATTACGTTACTCAAAACCCGTGATTAAACGCTTGGGTAAAACGGGTTCTAATGTGATCACTCGTATTATGGG
ATTACTCTTAATGTCGCTTGGTATTGAGATCATCATTGGTGGCTTAAGAAACTTAGGCATTGTTTAA

Upstream 100 bases:

>100_bases
TTCAAATATCACGATGTCGCCATTCAGAGCTTAACTTGCCTATTACTCGCCTCATCAATATAATATGTGCCTATTTTTAC
TCTCTCGTTAGGAGGATAAG

Downstream 100 bases:

>100_bases
AAGACATCACTCCCTTTAACTCCCCCATATACGGTGAAGTTCAGTGCCCTGCCTTTGACTTCACCGTTGTCTAAAAAATG
ATTTATGATATTTCAACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MDFAIYLQFFIGLIALVNPIGVVPIFYSMTSTLSKEQQNRTSFITCISISVILLVSFFFGSFILNAFHISIDSFRIAGGI
VVILIALTMINGKIGEHKMNKEEKSENFDDYNNIAVVPLATPIMAGPGSISATIVFSSTQNSLINYFYSSITIILFGVGC
YILLRYSKPVIKRLGKTGSNVITRIMGLLLMSLGIEIIIGGLRNLGIV

Sequences:

>Translated_208_residues
MDFAIYLQFFIGLIALVNPIGVVPIFYSMTSTLSKEQQNRTSFITCISISVILLVSFFFGSFILNAFHISIDSFRIAGGI
VVILIALTMINGKIGEHKMNKEEKSENFDDYNNIAVVPLATPIMAGPGSISATIVFSSTQNSLINYFYSSITIILFGVGC
YILLRYSKPVIKRLGKTGSNVITRIMGLLLMSLGIEIIIGGLRNLGIV
>Mature_208_residues
MDFAIYLQFFIGLIALVNPIGVVPIFYSMTSTLSKEQQNRTSFITCISISVILLVSFFFGSFILNAFHISIDSFRIAGGI
VVILIALTMINGKIGEHKMNKEEKSENFDDYNNIAVVPLATPIMAGPGSISATIVFSSTQNSLINYFYSSITIILFGVGC
YILLRYSKPVIKRLGKTGSNVITRIMGLLLMSLGIEIIIGGLRNLGIV

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=204, Percent_Identity=51.4705882352941, Blast_Score=207, Evalue=5e-55,
Organism=Escherichia coli, GI1787809, Length=197, Percent_Identity=31.4720812182741, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1789842, Length=193, Percent_Identity=29.0155440414508, Blast_Score=74, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22761; Mature: 22761

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFAIYLQFFIGLIALVNPIGVVPIFYSMTSTLSKEQQNRTSFITCISISVILLVSFFFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFILNAFHISIDSFRIAGGIVVILIALTMINGKIGEHKMNKEEKSENFDDYNNIAVVPLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCCCCEEEEEEC
TPIMAGPGSISATIVFSSTQNSLINYFYSSITIILFGVGCYILLRYSKPVIKRLGKTGSN
CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHH
VITRIMGLLLMSLGIEIIIGGLRNLGIV
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDFAIYLQFFIGLIALVNPIGVVPIFYSMTSTLSKEQQNRTSFITCISISVILLVSFFFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFILNAFHISIDSFRIAGGIVVILIALTMINGKIGEHKMNKEEKSENFDDYNNIAVVPLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHCCCCCCCCCEEEEEEC
TPIMAGPGSISATIVFSSTQNSLINYFYSSITIILFGVGCYILLRYSKPVIKRLGKTGSN
CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHH
VITRIMGLLLMSLGIEIIIGGLRNLGIV
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]