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The map label for this gene is fni [H]

Identifier: 15595029

GI number: 15595029

Start: 725413

End: 726495

Strand: Direct

Name: fni [H]

Synonym: BB0684

Alternate gene names: 15595029

Gene position: 725413-726495 (Clockwise)

Preceding gene: 15595028

Following gene: 15595030

Centisome position: 79.65

GC content: 32.13

Gene sequence:

>1083_bases
ATGATGGATACCGAGTTTATGGGTATCGAGCCTAATATATTAGAAAATAAAAAAAGGCATATTGAGATTTGTTTAAATAA
AAACGATGTTAAAGGTGGCTGTAATTTCTTAAAGTTTATTAAGCTAAAACACAATGCTCTTAGTGATTTTAATTTTTCCG
AGATAAACATAAAAGAAGAGATATTTGGATACAATATTAGTATGCCTGTTTTTATTTCTTCCATGACAGGGGGCAGTAAA
GAGGGGAATGACTTTAATAAATCTTTAGTTAGAATTGCAAATTATTTAAAAATTCCTATAGGGCTAGGTTCTTTTAAGCT
TTTGTTTAAGTATCCCGAGTACATAAGAGACTTTACTCTTAAAAGGTATGCTCATAATATTCCTTTGTTTGCCAATGTTG
GTGCTGTTCAGATTGTTGAATTTGGTATTTCTAAAATAGCTGAAATGATTAAAAGATTAGAAGTTGATGCAATTATTGTT
CATCTTAATGCAGGACAAGAATTGATGAAGGTTGATGGAGATAGAAATTTTAAAGGAATAAGAGAGTCAATAGCCAAATT
GTCAGACTTTTTAAGTGTTCCATTGATTGTTAAAGAGACAGGTTTTGGAATTTCGCCAAAAGACGTTAAGGAATTGTTCA
GCCTTGGTGCTTCTTATGTTGATCTTGCAGGGAGTGGTGGAACTAATTGGATTTTAGTAGAAGGCATGAAGAGTAATAAT
CTAAACATTGCATCTTGTTTTTCTGATTGGGGTATACCTTCGGTTTTTACTTTACTTAGTATTGATGATTCTCTAAAGGC
TAATATTTTTGCATCTGGTGGATATGAGACGGGCATGGATATTGCTAAAGGCATTGCCCTTGGAGCCAGGCTTATAGGTG
TTGCAGCAGTTGTTCTTAGGGCTTTTTATGATTCAGGAGAAGATGCTGTATTTGGTCTTTTTTCTGATTATGAACATATT
TTAAAAATGTCTATGTTTTTAAGTGGAAGCAAAAGTTTATTAGAGTTTAGAAATAATAAGTATTTTTTAAGTAGTTATTT
GCTTGATGAACTTGGAGTCTTTAAGCAGTTTTATGGAACTTAG

Upstream 100 bases:

>100_bases
AAAAATAGAAATAATGCAAATTTTGAAGAATATAAAGATTTTTTTCAAAATAAAATAATTCCTGGTGAATCCAGAGGATT
TTATTTAAAAGAACTAAGGA

Downstream 100 bases:

>100_bases
TAAAAATTTTAGACATAAAAGCGTTTTAGAAAAAAGGCAAGAGATAAAAAGTTTTTTGGAATTATCTTATAAAGATTTTT
TTTATAATAATGCCAATGAA

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MMDTEFMGIEPNILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFISSMTGGSK
EGNDFNKSLVRIANYLKIPIGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFANVGAVQIVEFGISKIAEMIKRLEVDAIIV
HLNAGQELMKVDGDRNFKGIRESIAKLSDFLSVPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNN
LNIASCFSDWGIPSVFTLLSIDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDAVFGLFSDYEHI
LKMSMFLSGSKSLLEFRNNKYFLSSYLLDELGVFKQFYGT

Sequences:

>Translated_360_residues
MMDTEFMGIEPNILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFISSMTGGSK
EGNDFNKSLVRIANYLKIPIGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFANVGAVQIVEFGISKIAEMIKRLEVDAIIV
HLNAGQELMKVDGDRNFKGIRESIAKLSDFLSVPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNN
LNIASCFSDWGIPSVFTLLSIDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDAVFGLFSDYEHI
LKMSMFLSGSKSLLEFRNNKYFLSSYLLDELGVFKQFYGT
>Mature_360_residues
MMDTEFMGIEPNILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEEIFGYNISMPVFISSMTGGSK
EGNDFNKSLVRIANYLKIPIGLGSFKLLFKYPEYIRDFTLKRYAHNIPLFANVGAVQIVEFGISKIAEMIKRLEVDAIIV
HLNAGQELMKVDGDRNFKGIRESIAKLSDFLSVPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNN
LNIASCFSDWGIPSVFTLLSIDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLRAFYDSGEDAVFGLFSDYEHI
LKMSMFLSGSKSLLEFRNNKYFLSSYLLDELGVFKQFYGT

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179 [H]

Pfam domain/function: PF01070 FMN_dh [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 40014; Mature: 40014

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDTEFMGIEPNILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEE
CCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEHHH
IFGYNISMPVFISSMTGGSKEGNDFNKSLVRIANYLKIPIGLGSFKLLFKYPEYIRDFTL
HCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
KRYAHNIPLFANVGAVQIVEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGI
HHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCHHHHCCCCCCHHHH
RESIAKLSDFLSVPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNN
HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCC
LNIASCFSDWGIPSVFTLLSIDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLR
CEEEEHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AFYDSGEDAVFGLFSDYEHILKMSMFLSGSKSLLEFRNNKYFLSSYLLDELGVFKQFYGT
HHHCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMDTEFMGIEPNILENKKRHIEICLNKNDVKGGCNFLKFIKLKHNALSDFNFSEINIKEE
CCCCCCCCCCCCHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEHHH
IFGYNISMPVFISSMTGGSKEGNDFNKSLVRIANYLKIPIGLGSFKLLFKYPEYIRDFTL
HCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
KRYAHNIPLFANVGAVQIVEFGISKIAEMIKRLEVDAIIVHLNAGQELMKVDGDRNFKGI
HHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCHHHHCCCCCCHHHH
RESIAKLSDFLSVPLIVKETGFGISPKDVKELFSLGASYVDLAGSGGTNWILVEGMKSNN
HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCC
LNIASCFSDWGIPSVFTLLSIDDSLKANIFASGGYETGMDIAKGIALGARLIGVAAVVLR
CEEEEHHHCCCCHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AFYDSGEDAVFGLFSDYEHILKMSMFLSGSKSLLEFRNNKYFLSSYLLDELGVFKQFYGT
HHHCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA