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The map label for this gene is tcp [H]

Identifier: 15595026

GI number: 15595026

Start: 721110

End: 723020

Strand: Direct

Name: tcp [H]

Synonym: BB0681

Alternate gene names: 15595026

Gene position: 721110-723020 (Clockwise)

Preceding gene: 15595025

Following gene: 15595028

Centisome position: 79.18

GC content: 32.13

Gene sequence:

>1911_bases
GTGGTTAGTATGAAGCTTAAAGCTAGGATGTTGCTACTTGTTCTTATTCTGATAGCATTCTTTATATCAATTTTGTTTTT
TGCTTTTGGAATGCTTATTAATAGTAAATTGGTGGATCAACAGTTTAATCTTATGATAAATCTTATTGAAAGCATTAAAA
GTTCTTTTAATCTTTACATCTCTTCAATGGAAGAGAAAGTTAGGGTTAGTTCCATGTATTTCAACTCTGCTGAAAAATTT
AATGAGGCTAGTAAAATTAAATCCAAAAGGTTGAGCTTTATTTCAGATCAATCTGAAATTCTTATTCAAACCGGTAGTAA
TATGATGGTTACAGACAAAGAAGGTAAAATAGTGTTTACTACGGCGGTTAAGGATAATAGTGATTTTGGCAAATCTATTG
GGGATAGAGAATATTTTACAAAACTTAAGGAGTCTAATAGTATTGTTTACAATTCCTTTGTCATGTTGGCAGATCCCGGG
TCTATTGAGGAGTCTTTACTTAAAGATATTTCCAAGATAAAAAATAAAAAAGGTCAGATTCCTTACATATTAATAGGTAT
GCCATTAAGAGATTTTGAAACAGATAACATTTTTGGTTATTTTATGTTTCTTTATTCAATGGATTATATATATAGGTCTT
TTAGAGGGATTAATTTTGGAATACTCTCTAGCGGTCGTGCGCTAGCTTATGATACTACGGGTAGATTGTTGGTTCATCAT
GTAGTATTGCCAGGTGATATTTTGACTGATATTAGTGCTTCTTATTCCAATATTATTAAGAAAACATCTGAAGATTTGTT
GCAAAAGAATAAAGAAATTTCAACTGTTTATTATTATGATCCTAAAAGCAATAAGAAATATGTGGGAATTAGTCAAAAGG
TGTTATTAAACTTGTCTAATAATAAATTTATTCTTTTAATGAGAACTTCAGAGGACGATTTTTATTACATGTCACGAGCT
ACAACTATAATCTTAGCAATTAGTTTTGTATTTACATTACTTATGCTTGCTATTGCAACTCTTTATCTTGTGAAAAAGTT
AAGCTCTTCTTTGAATAAGATACTGGAATATTCTGAGAGACTTGCTTCTGGTAATTTTACTGCTGATATTAATTTTGGCA
AATGGGATACTGTAGAGCTTTACAGTTTGTACGAAGGGCTTGAGCAGTTGAGAACCAATTTTTCTTCAGTTGCAAAAGGA
GTTATTGAAAATCTAGATTATCTTTATGAAAATGCAATTCAAATAGCAAATGCAAGCCAGAATTTAAGTTCTGGCGCTGT
TGAGCAGGCTTCTACTTTAGAGCAAATGACAGCAAATATTGAGCAAATTTCACAAGGTGTTTCTGAGAATACTGAAAATG
CAGCTACTACTGAAAAAATTGCTGTTAATACTAATGAAAGGACTAAAGAGGGGCATAAATCTGTTGTTAAGGCTATTGAG
GCAATGACTGTAATTACTGAAAAAATTGGAATTATTGATGAGATAACAAGGCAAACCAATTTGCTTGCTTTAAATGCCTC
GATTGAAGCTGCACGAGTGGGAGAAAAGGGCAAGGGATTTGAAGTGGTAGCTGCTGAGGTTAGAAAGCTTGCAGATCAAA
GCAAAGAATCAGCAAGAGAGATTATTGATATTGCAAACAGAAGTTTAACTGTTGCAAGTCGTGCTGGGGAAAATTTTGAA
CAAATAGTTCCTGGTATGGAACAAACAGCCAGACTTGTAAAAAATATTTCTAATGAAAGTTATAAGCAAAGTGTTCAAAT
AGAGCAATTTAAAAATGCAATAGAGCAGGTTAGTCAGTTAGTCCAAACTACAGCCTCAAGCAGTGAAGAGCTTTCTGCAA
TGTCTGAAAAGATGTTAGAGAGTGTAAAAGATTTAAAAGAATCTGTTGATTATTTTAAGATCGAAAAGTAA

Upstream 100 bases:

>100_bases
TAAGCGAGTTGATCCTAAAAAAGCTATCGATATTGCTGATAAGGATTTAAATTTTGATGATGATTTTTCAGAGTTTTAGA
ATTTATTTTTTGTAAAAGAG

Downstream 100 bases:

>100_bases
GTAGAAGATTGAAAAATCTTCTCTAACTTTTTGGGCGGATTATTATTCTATGATTTTAAAAATTTTAGCACCCCCCAGGC
ATTCTGTGTTTTTATAAAAA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 636; Mature: 636

Protein sequence:

>636_residues
MVSMKLKARMLLLVLILIAFFISILFFAFGMLINSKLVDQQFNLMINLIESIKSSFNLYISSMEEKVRVSSMYFNSAEKF
NEASKIKSKRLSFISDQSEILIQTGSNMMVTDKEGKIVFTTAVKDNSDFGKSIGDREYFTKLKESNSIVYNSFVMLADPG
SIEESLLKDISKIKNKKGQIPYILIGMPLRDFETDNIFGYFMFLYSMDYIYRSFRGINFGILSSGRALAYDTTGRLLVHH
VVLPGDILTDISASYSNIIKKTSEDLLQKNKEISTVYYYDPKSNKKYVGISQKVLLNLSNNKFILLMRTSEDDFYYMSRA
TTIILAISFVFTLLMLAIATLYLVKKLSSSLNKILEYSERLASGNFTADINFGKWDTVELYSLYEGLEQLRTNFSSVAKG
VIENLDYLYENAIQIANASQNLSSGAVEQASTLEQMTANIEQISQGVSENTENAATTEKIAVNTNERTKEGHKSVVKAIE
AMTVITEKIGIIDEITRQTNLLALNASIEAARVGEKGKGFEVVAAEVRKLADQSKESAREIIDIANRSLTVASRAGENFE
QIVPGMEQTARLVKNISNESYKQSVQIEQFKNAIEQVSQLVQTTASSSEELSAMSEKMLESVKDLKESVDYFKIEK

Sequences:

>Translated_636_residues
MVSMKLKARMLLLVLILIAFFISILFFAFGMLINSKLVDQQFNLMINLIESIKSSFNLYISSMEEKVRVSSMYFNSAEKF
NEASKIKSKRLSFISDQSEILIQTGSNMMVTDKEGKIVFTTAVKDNSDFGKSIGDREYFTKLKESNSIVYNSFVMLADPG
SIEESLLKDISKIKNKKGQIPYILIGMPLRDFETDNIFGYFMFLYSMDYIYRSFRGINFGILSSGRALAYDTTGRLLVHH
VVLPGDILTDISASYSNIIKKTSEDLLQKNKEISTVYYYDPKSNKKYVGISQKVLLNLSNNKFILLMRTSEDDFYYMSRA
TTIILAISFVFTLLMLAIATLYLVKKLSSSLNKILEYSERLASGNFTADINFGKWDTVELYSLYEGLEQLRTNFSSVAKG
VIENLDYLYENAIQIANASQNLSSGAVEQASTLEQMTANIEQISQGVSENTENAATTEKIAVNTNERTKEGHKSVVKAIE
AMTVITEKIGIIDEITRQTNLLALNASIEAARVGEKGKGFEVVAAEVRKLADQSKESAREIIDIANRSLTVASRAGENFE
QIVPGMEQTARLVKNISNESYKQSVQIEQFKNAIEQVSQLVQTTASSSEELSAMSEKMLESVKDLKESVDYFKIEK
>Mature_636_residues
MVSMKLKARMLLLVLILIAFFISILFFAFGMLINSKLVDQQFNLMINLIESIKSSFNLYISSMEEKVRVSSMYFNSAEKF
NEASKIKSKRLSFISDQSEILIQTGSNMMVTDKEGKIVFTTAVKDNSDFGKSIGDREYFTKLKESNSIVYNSFVMLADPG
SIEESLLKDISKIKNKKGQIPYILIGMPLRDFETDNIFGYFMFLYSMDYIYRSFRGINFGILSSGRALAYDTTGRLLVHH
VVLPGDILTDISASYSNIIKKTSEDLLQKNKEISTVYYYDPKSNKKYVGISQKVLLNLSNNKFILLMRTSEDDFYYMSRA
TTIILAISFVFTLLMLAIATLYLVKKLSSSLNKILEYSERLASGNFTADINFGKWDTVELYSLYEGLEQLRTNFSSVAKG
VIENLDYLYENAIQIANASQNLSSGAVEQASTLEQMTANIEQISQGVSENTENAATTEKIAVNTNERTKEGHKSVVKAIE
AMTVITEKIGIIDEITRQTNLLALNASIEAARVGEKGKGFEVVAAEVRKLADQSKESAREIIDIANRSLTVASRAGENFE
QIVPGMEQTARLVKNISNESYKQSVQIEQFKNAIEQVSQLVQTTASSSEELSAMSEKMLESVKDLKESVDYFKIEK

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=323, Percent_Identity=31.5789473684211, Blast_Score=144, Evalue=2e-35,
Organism=Escherichia coli, GI2367378, Length=374, Percent_Identity=28.6096256684492, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1788195, Length=277, Percent_Identity=31.0469314079422, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1788194, Length=333, Percent_Identity=30.3303303303303, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1789453, Length=236, Percent_Identity=29.6610169491525, Blast_Score=100, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 71461; Mature: 71461

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSMKLKARMLLLVLILIAFFISILFFAFGMLINSKLVDQQFNLMINLIESIKSSFNLYI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSMEEKVRVSSMYFNSAEKFNEASKIKSKRLSFISDQSEILIQTGSNMMVTDKEGKIVFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCEEEE
TAVKDNSDFGKSIGDREYFTKLKESNSIVYNSFVMLADPGSIEESLLKDISKIKNKKGQI
EEECCCCHHHHCCCCHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCC
PYILIGMPLRDFETDNIFGYFMFLYSMDYIYRSFRGINFGILSSGRALAYDTTGRLLVHH
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCEEHHE
VVLPGDILTDISASYSNIIKKTSEDLLQKNKEISTVYYYDPKSNKKYVGISQKVLLNLSN
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCCCEEEEEECC
NKFILLMRTSEDDFYYMSRATTIILAISFVFTLLMLAIATLYLVKKLSSSLNKILEYSER
CEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASGNFTADINFGKWDTVELYSLYEGLEQLRTNFSSVAKGVIENLDYLYENAIQIANASQ
HCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NLSSGAVEQASTLEQMTANIEQISQGVSENTENAATTEKIAVNTNERTKEGHKSVVKAIE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH
AMTVITEKIGIIDEITRQTNLLALNASIEAARVGEKGKGFEVVAAEVRKLADQSKESARE
HHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IIDIANRSLTVASRAGENFEQIVPGMEQTARLVKNISNESYKQSVQIEQFKNAIEQVSQL
HHHHHCCCEEEHHHCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VQTTASSSEELSAMSEKMLESVKDLKESVDYFKIEK
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCC
>Mature Secondary Structure
MVSMKLKARMLLLVLILIAFFISILFFAFGMLINSKLVDQQFNLMINLIESIKSSFNLYI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSMEEKVRVSSMYFNSAEKFNEASKIKSKRLSFISDQSEILIQTGSNMMVTDKEGKIVFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCEEEE
TAVKDNSDFGKSIGDREYFTKLKESNSIVYNSFVMLADPGSIEESLLKDISKIKNKKGQI
EEECCCCHHHHCCCCHHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCC
PYILIGMPLRDFETDNIFGYFMFLYSMDYIYRSFRGINFGILSSGRALAYDTTGRLLVHH
CEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCEEHHE
VVLPGDILTDISASYSNIIKKTSEDLLQKNKEISTVYYYDPKSNKKYVGISQKVLLNLSN
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCCCEEEEEECC
NKFILLMRTSEDDFYYMSRATTIILAISFVFTLLMLAIATLYLVKKLSSSLNKILEYSER
CEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LASGNFTADINFGKWDTVELYSLYEGLEQLRTNFSSVAKGVIENLDYLYENAIQIANASQ
HCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NLSSGAVEQASTLEQMTANIEQISQGVSENTENAATTEKIAVNTNERTKEGHKSVVKAIE
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH
AMTVITEKIGIIDEITRQTNLLALNASIEAARVGEKGKGFEVVAAEVRKLADQSKESARE
HHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IIDIANRSLTVASRAGENFEQIVPGMEQTARLVKNISNESYKQSVQIEQFKNAIEQVSQL
HHHHHCCCEEEHHHCCCCHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
VQTTASSSEELSAMSEKMLESVKDLKESVDYFKIEK
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]