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The map label for this gene is tcp [H]

Identifier: 15595025

GI number: 15595025

Start: 718827

End: 721088

Strand: Direct

Name: tcp [H]

Synonym: BB0680

Alternate gene names: 15595025

Gene position: 718827-721088 (Clockwise)

Preceding gene: 15595024

Following gene: 15595026

Centisome position: 78.93

GC content: 32.67

Gene sequence:

>2262_bases
ATGTTATTGAAGCTTAAATACAGGTTTGTTGGATTTTTATTATTGTTTTTAATTTTTATACTGCTACTTTTTTCCACGAT
TTTTAATTTTGTTTTATGCGGTTATTTAGAAGATTATTATAAGCAGCTTACAAGGGCGCAAGTAAGAAGAGCAGCTTTTT
CTTTGCAATCTTTTTTAGACACCCTGCATGTCATAATCAATGGTGCAGCTTCTAATTTGGCACTTGAAACCATATCAGAA
TTTGCAATGTCTGAGAATAGAGGAAAAGATTTCTCTGAGTCGGAATTGATAGATTTAAGAAAAAATCCAAAATTTGTTAT
TGACTCTGTAAAGGTGAGCAAAAAATATCGACAATACTTATACAATTTTATGGCCAATCTTAAAAATGATACCCTTTTTG
AAGAATTCGCTTTTTTTGATTTTGAAGGGAGAGTAATTGTTAGCACAAGACATGAGAATAATATGGATTTTGGTCATTCT
GAGGCTAATACCAATTATTTTAAAAAAGCTGTTGAGGATTATAGGCAAAACCAATTAAAATTTATAGGTTGGTATTCAAA
TCTTTCTGAAGGAATATCCGCAGAAGTTGCTATTAGGTCTAAACAAAGCGAAAAAAAGGCTTTTGCAATAATTGTACCTG
TATATTCCCCAGAAGATAAACTTGTTTGTGGGTATTTGGCCGGATATTTGCTTAATGATATTGTGGCAGATAGTTTTGAT
AGATTTAGATTCGGTTTTTATAAAAGAGGCAATTTTATTTATGTGGATCCCAACAATATAGCAGTTAATCCTTTTGAAGA
ATATAATGAAACCAGCAGGGTTAGTTCTAAATTTTTGAATGTTCTTAAAGATGTTTTCTCTAAGCCCCCTTTTCCATCAA
ACATTGCCAGTGAAGTGTCGGTTTACACTATTGATAGAATACTTTTGTCCGAAATGGGAGAAGATTGTTATTATGCAATG
TTGCCCATAAGTAGTAAATTGGGAGAAAAGAGTGGAGTACTTATTGCTAGGCTTCCTTATAAGGATATTTACGGAGTAAT
ATCTAGTCTAAGATTTCAGTATATTTTATATTCAGTCTTAGGCATTATAGCATTAAGTATTGTTCTTTCAATTAGAATAG
ACAGGATTATTAGTTTTCGTTTAAACGCAATTAGAGTTCTAGTTCAAGATATGGTTAAGGGCAATTTAGATAAAGATTAT
GCTCTTGATGATGATGAAAATACTCTTGATGAACTTGGCATGTTAAGTCTTCAGGTTGTTAAAATGAAAAAAGCTATTTC
TGTAGCAATTTCTAGTGTTTTGAGAAATATTAGCTATGTAAATAAGGCAAGTTTAGAAGTTGCCAGTTCAAGTCAAAATT
TAAGCTCTAGTGCATTGCAACAGGCATCTGCTCTTGAAGAAATGTCAGCTAATGTTGAGCAAATAGCCTCAGGTGTCAAC
ATGAGCGCCAATAATTCTTATGAAACAGAACAAATAGCTTTAAAGACGAATGAAAATTCTCAGATAGGTGGTAGGGCCGT
TGAAGAATCTGTTATTGCTATGCAAGACATTGTGGAGAAAGTTAGTGTTATTGAAGAGATAGCTAGAAAAACCAATTTAC
TTGCTTTGAATGCGGCTATTGAAGCTGCAAGAGCAGGAGATGAGGGAAAGGGATTTGCTGTTGTGGCCAGTGAGATTAGA
AAGTTGGCTGATTTGAGTAAAATTTCTGCTCTTGAGATTGGAGAGTTAGTTGAAGATAACTCTAAGGTAGCAACTGAAGC
GGGAGTGATCTTTAAAGAAATGCTACCCGAAATTGAAGAAACGGCTAATCTTGTTAAGAAGATTTCAGAAGGTAGCTCTA
AGCAAAGCGATCAGATTGCTCAATTTAAAATGGCTTTAGATCAGGTTGGAGAAGTTGTTCAATCTTCAGCTTCAAGCAGT
GAGCAGCTTTCTAGTATGTCCGATAAAATGTTAGAAAAGTCTAAGGAACTTAGAAAATCTGTATTATTTTTCAAAATTAA
AGATTCTAAAATTGAAAATCCAGAAAATGATGATTATGATTTCAGGTTAATAGATTGTCCTGAAAATTCTTTTAAAGATG
AAAATCAAAATTTGAAAAGCAATGGAATTTCTACTTCAAATGCCAGTGGGCATAATAATTATTCTTTAGATATTGAGAGC
GAATCTTCTGTAAGAACTATTAATAAGCGAGTTGATCCTAAAAAAGCTATCGATATTGCTGATAAGGATTTAAATTTTGA
TGATGATTTTTCAGAGTTTTAG

Upstream 100 bases:

>100_bases
TTTGAGAGTTTTTGATTTTTTGCTGTAAATTTTTTTTTGATACCCTTTGGTCTTGAGTTTATTTGATTAAATAAGTAGGT
GATTTGTGAGGTAGTTTATT

Downstream 100 bases:

>100_bases
AATTTATTTTTTGTAAAAGAGGTGGTTAGTATGAAGCTTAAAGCTAGGATGTTGCTACTTGTTCTTATTCTGATAGCATT
CTTTATATCAATTTTGTTTT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Citrate chemoreceptor protein [H]

Number of amino acids: Translated: 753; Mature: 753

Protein sequence:

>753_residues
MLLKLKYRFVGFLLLFLIFILLLFSTIFNFVLCGYLEDYYKQLTRAQVRRAAFSLQSFLDTLHVIINGAASNLALETISE
FAMSENRGKDFSESELIDLRKNPKFVIDSVKVSKKYRQYLYNFMANLKNDTLFEEFAFFDFEGRVIVSTRHENNMDFGHS
EANTNYFKKAVEDYRQNQLKFIGWYSNLSEGISAEVAIRSKQSEKKAFAIIVPVYSPEDKLVCGYLAGYLLNDIVADSFD
RFRFGFYKRGNFIYVDPNNIAVNPFEEYNETSRVSSKFLNVLKDVFSKPPFPSNIASEVSVYTIDRILLSEMGEDCYYAM
LPISSKLGEKSGVLIARLPYKDIYGVISSLRFQYILYSVLGIIALSIVLSIRIDRIISFRLNAIRVLVQDMVKGNLDKDY
ALDDDENTLDELGMLSLQVVKMKKAISVAISSVLRNISYVNKASLEVASSSQNLSSSALQQASALEEMSANVEQIASGVN
MSANNSYETEQIALKTNENSQIGGRAVEESVIAMQDIVEKVSVIEEIARKTNLLALNAAIEAARAGDEGKGFAVVASEIR
KLADLSKISALEIGELVEDNSKVATEAGVIFKEMLPEIEETANLVKKISEGSSKQSDQIAQFKMALDQVGEVVQSSASSS
EQLSSMSDKMLEKSKELRKSVLFFKIKDSKIENPENDDYDFRLIDCPENSFKDENQNLKSNGISTSNASGHNNYSLDIES
ESSVRTINKRVDPKKAIDIADKDLNFDDDFSEF

Sequences:

>Translated_753_residues
MLLKLKYRFVGFLLLFLIFILLLFSTIFNFVLCGYLEDYYKQLTRAQVRRAAFSLQSFLDTLHVIINGAASNLALETISE
FAMSENRGKDFSESELIDLRKNPKFVIDSVKVSKKYRQYLYNFMANLKNDTLFEEFAFFDFEGRVIVSTRHENNMDFGHS
EANTNYFKKAVEDYRQNQLKFIGWYSNLSEGISAEVAIRSKQSEKKAFAIIVPVYSPEDKLVCGYLAGYLLNDIVADSFD
RFRFGFYKRGNFIYVDPNNIAVNPFEEYNETSRVSSKFLNVLKDVFSKPPFPSNIASEVSVYTIDRILLSEMGEDCYYAM
LPISSKLGEKSGVLIARLPYKDIYGVISSLRFQYILYSVLGIIALSIVLSIRIDRIISFRLNAIRVLVQDMVKGNLDKDY
ALDDDENTLDELGMLSLQVVKMKKAISVAISSVLRNISYVNKASLEVASSSQNLSSSALQQASALEEMSANVEQIASGVN
MSANNSYETEQIALKTNENSQIGGRAVEESVIAMQDIVEKVSVIEEIARKTNLLALNAAIEAARAGDEGKGFAVVASEIR
KLADLSKISALEIGELVEDNSKVATEAGVIFKEMLPEIEETANLVKKISEGSSKQSDQIAQFKMALDQVGEVVQSSASSS
EQLSSMSDKMLEKSKELRKSVLFFKIKDSKIENPENDDYDFRLIDCPENSFKDENQNLKSNGISTSNASGHNNYSLDIES
ESSVRTINKRVDPKKAIDIADKDLNFDDDFSEF
>Mature_753_residues
MLLKLKYRFVGFLLLFLIFILLLFSTIFNFVLCGYLEDYYKQLTRAQVRRAAFSLQSFLDTLHVIINGAASNLALETISE
FAMSENRGKDFSESELIDLRKNPKFVIDSVKVSKKYRQYLYNFMANLKNDTLFEEFAFFDFEGRVIVSTRHENNMDFGHS
EANTNYFKKAVEDYRQNQLKFIGWYSNLSEGISAEVAIRSKQSEKKAFAIIVPVYSPEDKLVCGYLAGYLLNDIVADSFD
RFRFGFYKRGNFIYVDPNNIAVNPFEEYNETSRVSSKFLNVLKDVFSKPPFPSNIASEVSVYTIDRILLSEMGEDCYYAM
LPISSKLGEKSGVLIARLPYKDIYGVISSLRFQYILYSVLGIIALSIVLSIRIDRIISFRLNAIRVLVQDMVKGNLDKDY
ALDDDENTLDELGMLSLQVVKMKKAISVAISSVLRNISYVNKASLEVASSSQNLSSSALQQASALEEMSANVEQIASGVN
MSANNSYETEQIALKTNENSQIGGRAVEESVIAMQDIVEKVSVIEEIARKTNLLALNAAIEAARAGDEGKGFAVVASEIR
KLADLSKISALEIGELVEDNSKVATEAGVIFKEMLPEIEETANLVKKISEGSSKQSDQIAQFKMALDQVGEVVQSSASSS
EQLSSMSDKMLEKSKELRKSVLFFKIKDSKIENPENDDYDFRLIDCPENSFKDENQNLKSNGISTSNASGHNNYSLDIES
ESSVRTINKRVDPKKAIDIADKDLNFDDDFSEF

Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=315, Percent_Identity=32.0634920634921, Blast_Score=145, Evalue=1e-35,
Organism=Escherichia coli, GI2367378, Length=335, Percent_Identity=30.4477611940298, Blast_Score=139, Evalue=5e-34,
Organism=Escherichia coli, GI1787690, Length=288, Percent_Identity=30.2083333333333, Blast_Score=135, Evalue=1e-32,
Organism=Escherichia coli, GI1788194, Length=269, Percent_Identity=30.1115241635688, Blast_Score=124, Evalue=3e-29,
Organism=Escherichia coli, GI1789453, Length=272, Percent_Identity=27.5735294117647, Blast_Score=105, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 84580; Mature: 84580

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKLKYRFVGFLLLFLIFILLLFSTIFNFVLCGYLEDYYKQLTRAQVRRAAFSLQSFLD
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLHVIINGAASNLALETISEFAMSENRGKDFSESELIDLRKNPKFVIDSVKVSKKYRQYL
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHH
YNFMANLKNDTLFEEFAFFDFEGRVIVSTRHENNMDFGHSEANTNYFKKAVEDYRQNQLK
HHHHHHCCCCHHHHHHHEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCEE
FIGWYSNLSEGISAEVAIRSKQSEKKAFAIIVPVYSPEDKLVCGYLAGYLLNDIVADSFD
EEEEHHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCHH
RFRFGFYKRGNFIYVDPNNIAVNPFEEYNETSRVSSKFLNVLKDVFSKPPFPSNIASEVS
HHHHCEEECCCEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
VYTIDRILLSEMGEDCYYAMLPISSKLGEKSGVLIARLPYKDIYGVISSLRFQYILYSVL
HHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
GIIALSIVLSIRIDRIISFRLNAIRVLVQDMVKGNLDKDYALDDDENTLDELGMLSLQVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
KMKKAISVAISSVLRNISYVNKASLEVASSSQNLSSSALQQASALEEMSANVEQIASGVN
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCC
MSANNSYETEQIALKTNENSQIGGRAVEESVIAMQDIVEKVSVIEEIARKTNLLALNAAI
CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHH
EAARAGDEGKGFAVVASEIRKLADLSKISALEIGELVEDNSKVATEAGVIFKEMLPEIEE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
TANLVKKISEGSSKQSDQIAQFKMALDQVGEVVQSSASSSEQLSSMSDKMLEKSKELRKS
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VLFFKIKDSKIENPENDDYDFRLIDCPENSFKDENQNLKSNGISTSNASGHNNYSLDIES
HEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECC
ESSVRTINKRVDPKKAIDIADKDLNFDDDFSEF
CCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLLKLKYRFVGFLLLFLIFILLLFSTIFNFVLCGYLEDYYKQLTRAQVRRAAFSLQSFLD
CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLHVIINGAASNLALETISEFAMSENRGKDFSESELIDLRKNPKFVIDSVKVSKKYRQYL
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHH
YNFMANLKNDTLFEEFAFFDFEGRVIVSTRHENNMDFGHSEANTNYFKKAVEDYRQNQLK
HHHHHHCCCCHHHHHHHEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCEE
FIGWYSNLSEGISAEVAIRSKQSEKKAFAIIVPVYSPEDKLVCGYLAGYLLNDIVADSFD
EEEEHHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCHH
RFRFGFYKRGNFIYVDPNNIAVNPFEEYNETSRVSSKFLNVLKDVFSKPPFPSNIASEVS
HHHHCEEECCCEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
VYTIDRILLSEMGEDCYYAMLPISSKLGEKSGVLIARLPYKDIYGVISSLRFQYILYSVL
HHHHHHHHHHHCCCCCEEEEEECHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH
GIIALSIVLSIRIDRIISFRLNAIRVLVQDMVKGNLDKDYALDDDENTLDELGMLSLQVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
KMKKAISVAISSVLRNISYVNKASLEVASSSQNLSSSALQQASALEEMSANVEQIASGVN
HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCC
MSANNSYETEQIALKTNENSQIGGRAVEESVIAMQDIVEKVSVIEEIARKTNLLALNAAI
CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHH
EAARAGDEGKGFAVVASEIRKLADLSKISALEIGELVEDNSKVATEAGVIFKEMLPEIEE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
TANLVKKISEGSSKQSDQIAQFKMALDQVGEVVQSSASSSEQLSSMSDKMLEKSKELRKS
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VLFFKIKDSKIENPENDDYDFRLIDCPENSFKDENQNLKSNGISTSNASGHNNYSLDIES
HEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCEEEEECC
ESSVRTINKRVDPKKAIDIADKDLNFDDDFSEF
CCHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8419927; 11677609 [H]