Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
---|---|
Accession | NC_001318 |
Length | 910,724 |
Click here to switch to the map view.
The map label for this gene is leuS [H]
Identifier: 15594596
GI number: 15594596
Start: 256463
End: 258985
Strand: Direct
Name: leuS [H]
Synonym: BB0251
Alternate gene names: 15594596
Gene position: 256463-258985 (Clockwise)
Preceding gene: 15594595
Following gene: 15594597
Centisome position: 28.16
GC content: 31.83
Gene sequence:
>2523_bases ATGTCTAAATACGAATTCATAAAAATTGAAAAAAAATGGCAAGAATTTTGGGATAATAACAAAACATACAAAGTAGAAGA AGATCCAAGTATTCCCAAGGAAAAAAGATTGTATATACTTGACATGTTCCCCTATCCTTCTGCCAACGGGCTTCATGTTG GTCATCCAGAAGGATACACAGCAACAGACATATTTGGAAGATACAAGCTTTTGAATGGATTTCATGTACTTCACCCAATA GGATTTGATAGCTTTGGACTTCCTGCTGAAAATTACGCAATACAAACAGGAACTCACCCTCAAAAAAGTACAGAAGAAAA TATTAATAAGTTTAAAAAACAAATAAAAGCTTTGGGGTTTGCCTATGATTGGGATCGAGAAATTAGAACACATGAGGAGA ATTACTATAAATGGACACAGTGGATTTTCCTGCAATTATATAAAAAAGGGCTAGCTTATGTAAAAGAAATGCCTGTATGG TACTGCCCCGAGCTTGGAACGGTACTAGCAAATGAAGAGATTATTCAAACTTCAGATGGACCAAAATCTGAGAGAGGATC TTACAGCGTCGAAAAAAAATATTTAAGACAGTGGGTTTTAAAAATTACAAAGTATGCTGAAAGATTGCTAGACGACCTTG AAGAATTAGAATGGCCTGAATCTGTAAAAGAAATGCAGCGAAATTGGATTGGCAAATCAACAGGAGTTGAAATTGAATTT GAAATTGAAGGCCACAGCGATAAAATTAAAGTCTTTACAACAAGGCCAGACACAATCTTTGGCATCACATATTTAGTGAT CGCACCAGAAAATAAACTAATAGAAAAAATAACAAAGAACAACTTTAAACAAAATGTTTTAAAATATGTAAAGCACGAAG AACTCAAAAGCGATCTTAATAGGACTTCTCTTGAAAAAGATAAATCGGGAGTTTTCACAGGATCTTACGCATTTCATCCA ATAACAAATGAAAAAATTCCAATTTGGGTTGGAAGCTACGTACTAGGAACTTACGGAACCGGAGCTGTAATGGGTGTTCC AGCACATGATGAAAGAGACTTTCAATTTGCCAAAAAGTATCAATTAAAAATTTTACCCGTGATATCAAAATCGGGGAAAA ATGAAATATTAGAAAAAGCATTTGTTGATGATGGAATTTCAATAAATTCTCCCAATGAATTTAATAATCTTAAAAATTCT GAAGTAAAAGACAAAGTAATAAAATGGCTTACTAAAAACAAAAAAGGGAAAGAAAAAGTTGCCTACAAGCTTAGAGATTG GATTTTTTCAAGACAAAGATACTGGGGAGAGCCTATACCCATTTTGTTTGATAAACTTGGAAATGCAATACCTTTAGAGG AAAATGATCTTCCCTTAAAGCTTCCAGAAATTGCAAACTATAAACCTTCTGGAACAGGTGAATCTCCTTTGTCAAGAATT AAAGATTGGGTAAACGTAAAAGATATGGGCTTTACAAGAGAAACAAACACAATGCCTCAATGGGCAGGCTCTTGTTGGTA TTATTTAAGATACTTAGACCCCAAAAACTCAAAAGAGTTTGCAAACAAAAAAAAAATTGAATATTGGATGCCGGTTGATC TATACATAGGCGGAGCTGAACATACAGTATTACACCTGCTTTACTCAAGGTTTTGGCACAAGGTTCTTTATGATCTAGGA TACGTAAATACCAAAGAACCTTTTAAAAAGCTAATAAATCAAGGCATAATAACATCATTTTCTTATCAAAAAGAAAACGG GGTTTTAATACCCAATGACCAAGTTATAGAAAAAGACAATAAATTTTTTGATAAAAAAGATAACAAAGAAGTAACCCAAG TAATTGCCAAAATGTCAAAATCTTTAAAAAATGTAATAAACCCAGACGACATTATTAAGGAATTTGGAGCAGACTCAATG AGAATTTATGAAATGTTTATGGGGCCACTAACAGATTCTAAGCCTTGGAACACTAAAGGAATTATTGGTGTTTTTCGATT TTTAAACAAAATTTGGAACTTAAGAGAAAAAGAACTATCAAAAGAGAATCCCCCAAGGGAAATAATATCTGAACTACATA AAGTAATAAAAAAAGTCACAGAAGACACAGAAAAACTAAATTTTAACACAGCAATCTCCGCCATGATGATATTTATAAAT GAACTTCTAAAGTATGAAAAAAATTATTTAAACATATTTAAACCGTTTATCATTATTTTATCTCCCTATGCACCCCATTT AGCAGAAGAGTTGTGGGAATATATTGGAGAGCTTCCTAGTTTATTCAAAAATTCAAAATGGCCAAAATTCGATGAAAGCC TTATTATTAAAGGCAAAAAAGAAATTGTCTTGCAAATAAATGGAAAAATAAAAGACAAAATTTTACTAAACAAAGAGACA GGCGAAAAAGAACTAAAAGAAATAGCAATGGAAAATAGCAAAATAAAATCAAACTTATTAAATAAAAAAATAGTAAAAAT AATTGTAATTAAAAACAAGCTTGTCAACATAGTGATAAAGTAA
Upstream 100 bases:
>100_bases CATCAAAATTGTTAGCAAATTATTAAATAAAATTAACAAAAATGCAATCTAAAAGAATATTAGAGAATAAGTTGTTATGA GTTAATTTTCAAGAGGACAA
Downstream 100 bases:
>100_bases AAAAGAGGCGTTATATGGACTTTGAAGGTCTAAGCATTAGATATAAAGGAATTATATTCACAATATTTATCTTAATTACT ATTTTTTTAGGATTTTTTTT
Product: leucyl-tRNA synthetase
Products: NA
Alternate protein names: Leucine--tRNA ligase; LeuRS [H]
Number of amino acids: Translated: 840; Mature: 839
Protein sequence:
>840_residues MSKYEFIKIEKKWQEFWDNNKTYKVEEDPSIPKEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPI GFDSFGLPAENYAIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLAYVKEMPVW YCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDDLEELEWPESVKEMQRNWIGKSTGVEIEF EIEGHSDKIKVFTTRPDTIFGITYLVIAPENKLIEKITKNNFKQNVLKYVKHEELKSDLNRTSLEKDKSGVFTGSYAFHP ITNEKIPIWVGSYVLGTYGTGAVMGVPAHDERDFQFAKKYQLKILPVISKSGKNEILEKAFVDDGISINSPNEFNNLKNS EVKDKVIKWLTKNKKGKEKVAYKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEENDLPLKLPEIANYKPSGTGESPLSRI KDWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEHTVLHLLYSRFWHKVLYDLG YVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNKFFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSM RIYEMFMGPLTDSKPWNTKGIIGVFRFLNKIWNLREKELSKENPPREIISELHKVIKKVTEDTEKLNFNTAISAMMIFIN ELLKYEKNYLNIFKPFIIILSPYAPHLAEELWEYIGELPSLFKNSKWPKFDESLIIKGKKEIVLQINGKIKDKILLNKET GEKELKEIAMENSKIKSNLLNKKIVKIIVIKNKLVNIVIK
Sequences:
>Translated_840_residues MSKYEFIKIEKKWQEFWDNNKTYKVEEDPSIPKEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPI GFDSFGLPAENYAIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLAYVKEMPVW YCPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDDLEELEWPESVKEMQRNWIGKSTGVEIEF EIEGHSDKIKVFTTRPDTIFGITYLVIAPENKLIEKITKNNFKQNVLKYVKHEELKSDLNRTSLEKDKSGVFTGSYAFHP ITNEKIPIWVGSYVLGTYGTGAVMGVPAHDERDFQFAKKYQLKILPVISKSGKNEILEKAFVDDGISINSPNEFNNLKNS EVKDKVIKWLTKNKKGKEKVAYKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEENDLPLKLPEIANYKPSGTGESPLSRI KDWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEHTVLHLLYSRFWHKVLYDLG YVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNKFFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSM RIYEMFMGPLTDSKPWNTKGIIGVFRFLNKIWNLREKELSKENPPREIISELHKVIKKVTEDTEKLNFNTAISAMMIFIN ELLKYEKNYLNIFKPFIIILSPYAPHLAEELWEYIGELPSLFKNSKWPKFDESLIIKGKKEIVLQINGKIKDKILLNKET GEKELKEIAMENSKIKSNLLNKKIVKIIVIKNKLVNIVIK >Mature_839_residues SKYEFIKIEKKWQEFWDNNKTYKVEEDPSIPKEKRLYILDMFPYPSANGLHVGHPEGYTATDIFGRYKLLNGFHVLHPIG FDSFGLPAENYAIQTGTHPQKSTEENINKFKKQIKALGFAYDWDREIRTHEENYYKWTQWIFLQLYKKGLAYVKEMPVWY CPELGTVLANEEIIQTSDGPKSERGSYSVEKKYLRQWVLKITKYAERLLDDLEELEWPESVKEMQRNWIGKSTGVEIEFE IEGHSDKIKVFTTRPDTIFGITYLVIAPENKLIEKITKNNFKQNVLKYVKHEELKSDLNRTSLEKDKSGVFTGSYAFHPI TNEKIPIWVGSYVLGTYGTGAVMGVPAHDERDFQFAKKYQLKILPVISKSGKNEILEKAFVDDGISINSPNEFNNLKNSE VKDKVIKWLTKNKKGKEKVAYKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEENDLPLKLPEIANYKPSGTGESPLSRIK DWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAEHTVLHLLYSRFWHKVLYDLGY VNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDNKFFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMR IYEMFMGPLTDSKPWNTKGIIGVFRFLNKIWNLREKELSKENPPREIISELHKVIKKVTEDTEKLNFNTAISAMMIFINE LLKYEKNYLNIFKPFIIILSPYAPHLAEELWEYIGELPSLFKNSKWPKFDESLIIKGKKEIVLQINGKIKDKILLNKETG EKELKEIAMENSKIKSNLLNKKIVKIIVIKNKLVNIVIK
Specific function: Unknown
COG id: COG0495
COG function: function code J; Leucyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI7661872, Length=882, Percent_Identity=30.952380952381, Blast_Score=440, Evalue=1e-123, Organism=Escherichia coli, GI1786861, Length=872, Percent_Identity=38.5321100917431, Blast_Score=597, Evalue=1e-172, Organism=Caenorhabditis elegans, GI71997510, Length=778, Percent_Identity=29.9485861182519, Blast_Score=290, Evalue=3e-78, Organism=Caenorhabditis elegans, GI71997517, Length=778, Percent_Identity=29.9485861182519, Blast_Score=290, Evalue=3e-78, Organism=Caenorhabditis elegans, GI212645227, Length=315, Percent_Identity=31.4285714285714, Blast_Score=142, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6323414, Length=892, Percent_Identity=33.8565022421525, Blast_Score=443, Evalue=1e-125, Organism=Drosophila melanogaster, GI21355409, Length=841, Percent_Identity=30.7966706302021, Blast_Score=365, Evalue=1e-100,
Paralogues:
None
Copy number: 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR002300 - InterPro: IPR002302 - InterPro: IPR014729 - InterPro: IPR009080 - InterPro: IPR013155 - InterPro: IPR009008 [H]
Pfam domain/function: PF08264 Anticodon_1; PF00133 tRNA-synt_1 [H]
EC number: =6.1.1.4 [H]
Molecular weight: Translated: 98159; Mature: 98028
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKYEFIKIEKKWQEFWDNNKTYKVEEDPSIPKEKRLYILDMFPYPSANGLHVGHPEGYT CCCCEEEEHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCC ATDIFGRYKLLNGFHVLHPIGFDSFGLPAENYAIQTGTHPQKSTEENINKFKKQIKALGF HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCC AYDWDREIRTHEENYYKWTQWIFLQLYKKGLAYVKEMPVWYCPELGTVLANEEIIQTSDG CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHCCCCCEECCCC PKSERGSYSVEKKYLRQWVLKITKYAERLLDDLEELEWPESVKEMQRNWIGKSTGVEIEF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEE EIEGHSDKIKVFTTRPDTIFGITYLVIAPENKLIEKITKNNFKQNVLKYVKHEELKSDLN EECCCCCEEEEEEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTSLEKDKSGVFTGSYAFHPITNEKIPIWVGSYVLGTYGTGAVMGVPAHDERDFQFAKKY HHHHHHCCCCEEECCEEECCCCCCCCEEEECCCHHCCCCCCCEEECCCCCCCCHHHHHHC QLKILPVISKSGKNEILEKAFVDDGISINSPNEFNNLKNSEVKDKVIKWLTKNKKGKEKV CEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCHHHH AYKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEENDLPLKLPEIANYKPSGTGESPLSRI HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCEECCHHCCCCCCCCCCCHHHHH KDWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAE HHHCCHHHCCCCCCCCCCCHHHCCCEEEEEEECCCCCHHHHCCCCEEEEECEEEEECCCH HTVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDN HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECEECCCCEECCCCHHHCCCC KFFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMRIYEMFMGPLTDSKPWNTKG CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCH IIGVFRFLNKIWNLREKELSKENPPREIISELHKVIKKVTEDTEKLNFNTAISAMMIFIN HHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ELLKYEKNYLNIFKPFIIILSPYAPHLAEELWEYIGELPSLFKNSKWPKFDESLIIKGKK HHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCE EIVLQINGKIKDKILLNKETGEKELKEIAMENSKIKSNLLNKKIVKIIVIKNKLVNIVIK EEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEEEEC >Mature Secondary Structure SKYEFIKIEKKWQEFWDNNKTYKVEEDPSIPKEKRLYILDMFPYPSANGLHVGHPEGYT CCCEEEEHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCEECCCCCCCC ATDIFGRYKLLNGFHVLHPIGFDSFGLPAENYAIQTGTHPQKSTEENINKFKKQIKALGF HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCC AYDWDREIRTHEENYYKWTQWIFLQLYKKGLAYVKEMPVWYCPELGTVLANEEIIQTSDG CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHCCCCCEECCCC PKSERGSYSVEKKYLRQWVLKITKYAERLLDDLEELEWPESVKEMQRNWIGKSTGVEIEF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEE EIEGHSDKIKVFTTRPDTIFGITYLVIAPENKLIEKITKNNFKQNVLKYVKHEELKSDLN EECCCCCEEEEEEECCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTSLEKDKSGVFTGSYAFHPITNEKIPIWVGSYVLGTYGTGAVMGVPAHDERDFQFAKKY HHHHHHCCCCEEECCEEECCCCCCCCEEEECCCHHCCCCCCCEEECCCCCCCCHHHHHHC QLKILPVISKSGKNEILEKAFVDDGISINSPNEFNNLKNSEVKDKVIKWLTKNKKGKEKV CEEEEEEECCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCHHHH AYKLRDWIFSRQRYWGEPIPILFDKLGNAIPLEENDLPLKLPEIANYKPSGTGESPLSRI HHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCEECCHHCCCCCCCCCCCHHHHH KDWVNVKDMGFTRETNTMPQWAGSCWYYLRYLDPKNSKEFANKKKIEYWMPVDLYIGGAE HHHCCHHHCCCCCCCCCCCHHHCCCEEEEEEECCCCCHHHHCCCCEEEEECEEEEECCCH HTVLHLLYSRFWHKVLYDLGYVNTKEPFKKLINQGIITSFSYQKENGVLIPNDQVIEKDN HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEECEECCCCEECCCCHHHCCCC KFFDKKDNKEVTQVIAKMSKSLKNVINPDDIIKEFGADSMRIYEMFMGPLTDSKPWNTKG CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCH IIGVFRFLNKIWNLREKELSKENPPREIISELHKVIKKVTEDTEKLNFNTAISAMMIFIN HHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH ELLKYEKNYLNIFKPFIIILSPYAPHLAEELWEYIGELPSLFKNSKWPKFDESLIIKGKK HHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCE EIVLQINGKIKDKILLNKETGEKELKEIAMENSKIKSNLLNKKIVKIIVIKNKLVNIVIK EEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA