Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
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Accession | NC_001318 |
Length | 910,724 |
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The map label for this gene is dedA [C]
Identifier: 15594595
GI number: 15594595
Start: 255646
End: 256260
Strand: Direct
Name: dedA [C]
Synonym: BB0250
Alternate gene names: 15594595
Gene position: 255646-256260 (Clockwise)
Preceding gene: 15594594
Following gene: 15594596
Centisome position: 28.07
GC content: 25.04
Gene sequence:
>615_bases ATGACAAAAATGTATATAAACACAATAATAGAATATATTGATTCAAACATAGCTTATTCCCCAATAGTATTTTTTTCGTT ACTAATTTTAGCAGGACTTAATGTTCCTATTTCTGAGGATGCAATAGTACTAATGGGTGGAATTTTATCTAGTCGAAAAA ATGAATATACTATATTAATATTTTTAGGAATTTTTTGGGGAGCCTATCTTGGAGACATAATATCTTTTTACATTGGGAAA TTAATGGGAAATAAATTATTTAAAAACAAAAAAGACAATAACCTGCTTGACAAAATAAATTACTATTATGGTCAATATGG GGTATTAACTTTATTTATAGGAAGGTTTATACCCTTTGGAGTTAGAAACGCAATATTTATGTCAGCAGGAATGGGAAATA TGAAATCTAATCTATTTATTGTTTCTGACTTCTTTGCAACTTTGCTCTCAATAGTTGTTTATTTTACTCTAAGCTTCAAA CTAGGTCAATCATTTGAAATAATATTTTCAAAAATAAAAATAATTATATTTGCAATATTTATCGCTGTAATAGCAACAAC AATAATAATCTACGTAATTAAAAAAAATAAAAAAGTTGACAAAAATTTAAAATAA
Upstream 100 bases:
>100_bases TGTCCACAACAGCGTTAAAAATGGCAAAAACGGTTCTTATCCTTTACTTTGCATATTTAACTTTAGCAAGCATATATTTA ACTTATAAAACAAGAAATAG
Downstream 100 bases:
>100_bases AAAATATAATGGTTAATAGTGCTGTGGTGGTGGAAGTGGTAGACACGCTAGCTTGAGGGGCTAGTGGGCGCAAGCCCGTG CTGGTTCAAGTCCAGTTCAC
Product: DedA protein
Products: NA
Alternate protein names: Alkaline Phosphatase Like Protein; DedA Family Protein
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MTKMYINTIIEYIDSNIAYSPIVFFSLLILAGLNVPISEDAIVLMGGILSSRKNEYTILIFLGIFWGAYLGDIISFYIGK LMGNKLFKNKKDNNLLDKINYYYGQYGVLTLFIGRFIPFGVRNAIFMSAGMGNMKSNLFIVSDFFATLLSIVVYFTLSFK LGQSFEIIFSKIKIIIFAIFIAVIATTIIIYVIKKNKKVDKNLK
Sequences:
>Translated_204_residues MTKMYINTIIEYIDSNIAYSPIVFFSLLILAGLNVPISEDAIVLMGGILSSRKNEYTILIFLGIFWGAYLGDIISFYIGK LMGNKLFKNKKDNNLLDKINYYYGQYGVLTLFIGRFIPFGVRNAIFMSAGMGNMKSNLFIVSDFFATLLSIVVYFTLSFK LGQSFEIIFSKIKIIIFAIFIAVIATTIIIYVIKKNKKVDKNLK >Mature_203_residues TKMYINTIIEYIDSNIAYSPIVFFSLLILAGLNVPISEDAIVLMGGILSSRKNEYTILIFLGIFWGAYLGDIISFYIGKL MGNKLFKNKKDNNLLDKINYYYGQYGVLTLFIGRFIPFGVRNAIFMSAGMGNMKSNLFIVSDFFATLLSIVVYFTLSFKL GQSFEIIFSKIKIIIFAIFIAVIATTIIIYVIKKNKKVDKNLK
Specific function: Unknown
COG id: COG0586
COG function: function code S; Uncharacterized membrane-associated protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23142; Mature: 23011
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKMYINTIIEYIDSNIAYSPIVFFSLLILAGLNVPISEDAIVLMGGILSSRKNEYTILI CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEH FLGIFWGAYLGDIISFYIGKLMGNKLFKNKKDNNLLDKINYYYGQYGVLTLFIGRFIPFG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCHH VRNAIFMSAGMGNMKSNLFIVSDFFATLLSIVVYFTLSFKLGQSFEIIFSKIKIIIFAIF HHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IAVIATTIIIYVIKKNKKVDKNLK HHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TKMYINTIIEYIDSNIAYSPIVFFSLLILAGLNVPISEDAIVLMGGILSSRKNEYTILI CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEEEEH FLGIFWGAYLGDIISFYIGKLMGNKLFKNKKDNNLLDKINYYYGQYGVLTLFIGRFIPFG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCHH VRNAIFMSAGMGNMKSNLFIVSDFFATLLSIVVYFTLSFKLGQSFEIIFSKIKIIIFAIF HHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IAVIATTIIIYVIKKNKKVDKNLK HHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA