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The map label for this gene is oxyR [H]

Identifier: 154248142

GI number: 154248142

Start: 4675867

End: 4676775

Strand: Direct

Name: oxyR [H]

Synonym: Xaut_4222

Alternate gene names: 154248142

Gene position: 4675867-4676775 (Clockwise)

Preceding gene: 154248141

Following gene: 154248144

Centisome position: 88.08

GC content: 69.31

Gene sequence:

>909_bases
GTGACCCTGCGCGAACTACAATATCTCGTCGCCCTGGCCGACCACCGGAATTTCCGGCGGGCGGCCGAGGCGTGCCTCGT
CAGCCAGCCCACCCTCTCCACCCAGCTGCGCAAGCTGGAGGAGGAACTGGGCGTGCCGCTGGTGGAGCGCGCCCCGCGCC
GGGTCATGCTCACCCCCGCCGGCCGTGAGGCGGTGGAGCGGGCGCGGCGCATCCTCGACGAGGTGGAGCAATTGAAGGAA
GGCGCCCGCCGCAGCTGCGCGGCGGAGGCCGGCGCCCTCAAGCTCGGCGTGTTCCCGACGCTGGGGCCTTACCTTCTGCC
CCATGTGGTGCCCCTCATCCGCGCCCGCTTCCCGGAGCTGGAGCTGCTGCTGTTCGAGGAGAAGAGCGCTGCCCTCATCT
CCCGGCTGAACTACGGCACGCTGGATGCCGCCTTCCTGGCGCTGCCGGTGCACGACAGCCATTTCCATGCCGAGTTCCTG
TTCGAGGAGCCGTTCCTCCTCGCCGTTCCCGGCACCCATGCGCTGGCCAGCCGCGACAACCTCTCCATCACCGAGCTGTC
TCGCTACAATCTGATGCTGCTGGAGGATGGCCACTGCCTGCGCGACCAGGCGCTGGACGTGTGCCAGATGGCCGGGGCGC
GGGAGAAGTCCGAATTCCGCGCCACCAGTCTGGAGACCCTGCGCCAGATGGTGGCGGCGGGGGTGGGCATGACGCTGCTG
CCCATGCTGGCGACCCGCACCCCATCCCAGCCGGCCGAGAACATCCACCTCCTGGAATTCAGCGATTCCAAGCCCAGCCG
GCAGATCGCCATGCTCTGGCGCAAGACCTCCGCCATGGGCCGGCTTCTGGCCGATGTGGCGCAGGTGTGCCGCACCCTGC
CGCAGGAGCTGCTGGCGCCTCGGCATTGA

Upstream 100 bases:

>100_bases
CGCTCCAGCGCGCCGAAGGAAGAGGCGGTGAAGGCCGCGTGACCGGCCGGGCACGCCACTTCCTCTTTCTCCGGGCGACC
TCCCATGGGGGCCGCCCGCG

Downstream 100 bases:

>100_bases
AGAGGTTGCAGCCGTCATGGCCGGGCGACACACGGCCATCCACGCGGTGCGGCTGGGAACAGCCTTGAGGGGATCATGCC
GTCGGATTGACGTGGGTGGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MTLRELQYLVALADHRNFRRAAEACLVSQPTLSTQLRKLEEELGVPLVERAPRRVMLTPAGREAVERARRILDEVEQLKE
GARRSCAAEAGALKLGVFPTLGPYLLPHVVPLIRARFPELELLLFEEKSAALISRLNYGTLDAAFLALPVHDSHFHAEFL
FEEPFLLAVPGTHALASRDNLSITELSRYNLMLLEDGHCLRDQALDVCQMAGAREKSEFRATSLETLRQMVAAGVGMTLL
PMLATRTPSQPAENIHLLEFSDSKPSRQIAMLWRKTSAMGRLLADVAQVCRTLPQELLAPRH

Sequences:

>Translated_302_residues
MTLRELQYLVALADHRNFRRAAEACLVSQPTLSTQLRKLEEELGVPLVERAPRRVMLTPAGREAVERARRILDEVEQLKE
GARRSCAAEAGALKLGVFPTLGPYLLPHVVPLIRARFPELELLLFEEKSAALISRLNYGTLDAAFLALPVHDSHFHAEFL
FEEPFLLAVPGTHALASRDNLSITELSRYNLMLLEDGHCLRDQALDVCQMAGAREKSEFRATSLETLRQMVAAGVGMTLL
PMLATRTPSQPAENIHLLEFSDSKPSRQIAMLWRKTSAMGRLLADVAQVCRTLPQELLAPRH
>Mature_301_residues
TLRELQYLVALADHRNFRRAAEACLVSQPTLSTQLRKLEEELGVPLVERAPRRVMLTPAGREAVERARRILDEVEQLKEG
ARRSCAAEAGALKLGVFPTLGPYLLPHVVPLIRARFPELELLLFEEKSAALISRLNYGTLDAAFLALPVHDSHFHAEFLF
EEPFLLAVPGTHALASRDNLSITELSRYNLMLLEDGHCLRDQALDVCQMAGAREKSEFRATSLETLRQMVAAGVGMTLLP
MLATRTPSQPAENIHLLEFSDSKPSRQIAMLWRKTSAMGRLLADVAQVCRTLPQELLAPRH

Specific function: Required for the induction of a regulon of hydrogen peroxide inducible genes such as catalase and glutathione- reductase [H]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790399, Length=291, Percent_Identity=47.4226804123711, Blast_Score=258, Evalue=2e-70,
Organism=Escherichia coli, GI1788887, Length=279, Percent_Identity=30.4659498207885, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI157672245, Length=241, Percent_Identity=32.7800829875519, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1787879, Length=248, Percent_Identity=31.8548387096774, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787530, Length=262, Percent_Identity=26.7175572519084, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI145693105, Length=279, Percent_Identity=25.8064516129032, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI2367136, Length=243, Percent_Identity=29.6296296296296, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1788297, Length=251, Percent_Identity=29.0836653386454, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1788748, Length=247, Percent_Identity=26.7206477732794, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787601, Length=197, Percent_Identity=27.4111675126904, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1790208, Length=278, Percent_Identity=27.3381294964029, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787806, Length=243, Percent_Identity=24.2798353909465, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081904, Length=214, Percent_Identity=25.7009345794392, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788296, Length=226, Percent_Identity=25.6637168141593, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788481, Length=202, Percent_Identity=25.2475247524752, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87082132, Length=264, Percent_Identity=23.1060606060606, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33729; Mature: 33598

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRELQYLVALADHRNFRRAAEACLVSQPTLSTQLRKLEEELGVPLVERAPRRVMLTPA
CCHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHCCCCEEEECCC
GREAVERARRILDEVEQLKEGARRSCAAEAGALKLGVFPTLGPYLLPHVVPLIRARFPEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCE
ELLLFEEKSAALISRLNYGTLDAAFLALPVHDSHFHAEFLFEEPFLLAVPGTHALASRDN
EEEEECCHHHHHHHHCCCCCHHHHHEEEECCCCCCHHHEEECCCEEEEECCCHHHCCCCC
LSITELSRYNLMLLEDGHCLRDQALDVCQMAGAREKSEFRATSLETLRQMVAAGVGMTLL
CCCEEHHHCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
PMLATRTPSQPAENIHLLEFSDSKPSRQIAMLWRKTSAMGRLLADVAQVCRTLPQELLAP
HHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RH
CC
>Mature Secondary Structure 
TLRELQYLVALADHRNFRRAAEACLVSQPTLSTQLRKLEEELGVPLVERAPRRVMLTPA
CHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHCCCCEEEECCC
GREAVERARRILDEVEQLKEGARRSCAAEAGALKLGVFPTLGPYLLPHVVPLIRARFPEL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCCE
ELLLFEEKSAALISRLNYGTLDAAFLALPVHDSHFHAEFLFEEPFLLAVPGTHALASRDN
EEEEECCHHHHHHHHCCCCCHHHHHEEEECCCCCCHHHEEECCCEEEEECCCHHHCCCCC
LSITELSRYNLMLLEDGHCLRDQALDVCQMAGAREKSEFRATSLETLRQMVAAGVGMTLL
CCCEEHHHCEEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
PMLATRTPSQPAENIHLLEFSDSKPSRQIAMLWRKTSAMGRLLADVAQVCRTLPQELLAP
HHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RH
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA