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The map label for this gene is ytfM [H]

Identifier: 154248144

GI number: 154248144

Start: 4679057

End: 4681018

Strand: Direct

Name: ytfM [H]

Synonym: Xaut_4224

Alternate gene names: 154248144

Gene position: 4679057-4681018 (Clockwise)

Preceding gene: 154248142

Following gene: 154248145

Centisome position: 88.14

GC content: 67.89

Gene sequence:

>1962_bases
GTGGCGATATCAGGGCGACATTACTGGAACCGGCTGCGTCCGTTACTGCTTGCAGCCGTGGCTGTAACGCTTTCGGCTGT
GCCGTCGCATGCCCAGGATGATGATTTCTTCGGCTCCATCGCCGCGTTGTTCAACCCGAATCCGACGTCGCGCCAGACAC
CGGTCATCGATGCCACGCCCTATACTTTGAACATTGAGGTCCAGGGCGGCGACAGCAGCCTCAAGAACGCCGTCACCCAG
GCCTCCAACCTCGAAAGCCTGAAGGATCGGCCGCCCTCCGGCGCCGCCGGTCTGGTGCGCCGCGCGCTCTCCGATTTCGA
GCGGATCACCGCCGCGCTCTACGGGGAAGGCCGCTATGGCGCCACCATCCACATCACCGTTGCCGGCATTGCGCCCAACG
CCCCCAACATCTTCGACGTGGTGGAGCGGGCCCGCAAGGCCGGCCCGGTTCCGGTGCAGGTGGTTGTCGATCCCGGCCCT
CCCTTCGTCTTCGGCGACATCCGCATCCTCGACGCGGCCACCCGCCGCCCGCTCGCGGAGGGCCCGAGCCTGCGCGCCCT
TGGCCTCGAGCCGGGCGAATCCGCACGCGCCGATCGCGTGGTGCGTGCCGAGGCGGTGGTGGTGGATTTCTGGCGCGAGC
GCGGGCACCCCTTCGCCCGCCTCACCGGCAAGGACGTGGTGGCCGACCACGCCACCCACCGGCTCAACGTCACGCTTCTG
GTCGAGACCGGGCCGGTGGCCACCTTTGGCACCTTCACCGTCTCGGGCGCCGACTTCCTGCCGCCCAACTTCATCGAGGA
ACGGGTCGAGATCCCGCCCGGCACGCCCTATTCGCCGGACCGGCTGACGCGACTGCGCAAGCGCCTGTTGACCATCCAGG
CCATCGCCAGCGTGCGCATCCGCGAGGGCGAGCGGCTGGACGCCCAGGGCCGGCTGCCCATCTATATCGAGGTACGCCCG
CGCGATCCGCGCTACGTGGGTTTCTCGGCCAAGTATTCGAGCACGGATGGCTCGTCCATCAACGGCTTCTGGGGCCACCG
CAACCTGTTCGGCGGCGGCGAGACCTTGCGGCTCGACGCCTCGGTGTCGTGGTTCGGTGGGGTGCCGGAGGCGGTGCCCA
ATGCGGACCCGTTCGGCTACAAGCTCGCCGCCAGCTTCGTGAAGCCGGGCATATGGACCCCTCAGGACGACCTGATCCTC
AACGCCGCCATCCTGCGCGAGGTGACCAACGCCTATGTCCGCGAGGGCGTCGTTGCGCTCCTCGCCGTGCGCCACCGCTT
CGACGACCAGCTCTCCATGCAGGTGGGCGTCGACTTCGAGGACGGACAGGTGGAGGACACCACCGGCATCTACAATGCGC
TGGTCACCGGCATCCCGGTGGACCTCTTCTACGACACCACCGACAACGCCCTCGATCCGTCCCGCGGCATCCGGCTGAAC
GCCACGGTGGAGCCCTTCGCCTATCTCGGCGACAGCGGCGCCGGCCCGGTGATGCTGAAGGCCGCGCTTTCCGCCTATCA
CGCCTTCGACGACGACCGGCGCATCATCATCGCCGGCCGGGTGGCGGCAGGCAGCTTGGTGGGTGTGGGCGATCTCTACG
ACGTGCCGCCGCAGCGGCGCTTCTATGTGGGCGGCGGCGGCTCGGTGCGCGGCTATGATTACCAGTCGGCGAGCCCGCGC
AACGCCTTCGGCCAGATCGTGGGTGGCCTGTCCTTCTTCGAGGCGTCGGCGGAACTGCGCGTGCGCATCACCGACACCAT
CGGCATCGTGCCCTTCTTCGACATGGGCTCGGCCTTCGCCACCGAATATCCCGACTTCAGCGGCCTGAAATATTCGGCCG
GCATCGGCCTGCGCTATTACACGCCCATCGGGCCGCTGCGGGTCGATTTCGCCGTGCCGCTCAATCCCGGCCCCGATGAC
GGGTCCTTTGGCGTCTATGTCAGCCTGGGGCAGGCCTTCTGA

Upstream 100 bases:

>100_bases
GGTGGCGTTAGGAGAGCCCATCGTGTAGGCTGATTTGTGACATAAAGATCACATCTTTGCCGTAACACTGGCTGAAATGG
AAGGCATCGGGCGGGGTTTG

Downstream 100 bases:

>100_bases
TGGGAAAAGTGCGCACCCTCGCCAAATGGACCGGCCTTGCGCTTGCGGGCCTGACGCTGCTGCTCGCCCTGGCGTTCGGC
GCCATCCAGACACCGCCGGG

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 653; Mature: 652

Protein sequence:

>653_residues
MAISGRHYWNRLRPLLLAAVAVTLSAVPSHAQDDDFFGSIAALFNPNPTSRQTPVIDATPYTLNIEVQGGDSSLKNAVTQ
ASNLESLKDRPPSGAAGLVRRALSDFERITAALYGEGRYGATIHITVAGIAPNAPNIFDVVERARKAGPVPVQVVVDPGP
PFVFGDIRILDAATRRPLAEGPSLRALGLEPGESARADRVVRAEAVVVDFWRERGHPFARLTGKDVVADHATHRLNVTLL
VETGPVATFGTFTVSGADFLPPNFIEERVEIPPGTPYSPDRLTRLRKRLLTIQAIASVRIREGERLDAQGRLPIYIEVRP
RDPRYVGFSAKYSSTDGSSINGFWGHRNLFGGGETLRLDASVSWFGGVPEAVPNADPFGYKLAASFVKPGIWTPQDDLIL
NAAILREVTNAYVREGVVALLAVRHRFDDQLSMQVGVDFEDGQVEDTTGIYNALVTGIPVDLFYDTTDNALDPSRGIRLN
ATVEPFAYLGDSGAGPVMLKAALSAYHAFDDDRRIIIAGRVAAGSLVGVGDLYDVPPQRRFYVGGGGSVRGYDYQSASPR
NAFGQIVGGLSFFEASAELRVRITDTIGIVPFFDMGSAFATEYPDFSGLKYSAGIGLRYYTPIGPLRVDFAVPLNPGPDD
GSFGVYVSLGQAF

Sequences:

>Translated_653_residues
MAISGRHYWNRLRPLLLAAVAVTLSAVPSHAQDDDFFGSIAALFNPNPTSRQTPVIDATPYTLNIEVQGGDSSLKNAVTQ
ASNLESLKDRPPSGAAGLVRRALSDFERITAALYGEGRYGATIHITVAGIAPNAPNIFDVVERARKAGPVPVQVVVDPGP
PFVFGDIRILDAATRRPLAEGPSLRALGLEPGESARADRVVRAEAVVVDFWRERGHPFARLTGKDVVADHATHRLNVTLL
VETGPVATFGTFTVSGADFLPPNFIEERVEIPPGTPYSPDRLTRLRKRLLTIQAIASVRIREGERLDAQGRLPIYIEVRP
RDPRYVGFSAKYSSTDGSSINGFWGHRNLFGGGETLRLDASVSWFGGVPEAVPNADPFGYKLAASFVKPGIWTPQDDLIL
NAAILREVTNAYVREGVVALLAVRHRFDDQLSMQVGVDFEDGQVEDTTGIYNALVTGIPVDLFYDTTDNALDPSRGIRLN
ATVEPFAYLGDSGAGPVMLKAALSAYHAFDDDRRIIIAGRVAAGSLVGVGDLYDVPPQRRFYVGGGGSVRGYDYQSASPR
NAFGQIVGGLSFFEASAELRVRITDTIGIVPFFDMGSAFATEYPDFSGLKYSAGIGLRYYTPIGPLRVDFAVPLNPGPDD
GSFGVYVSLGQAF
>Mature_652_residues
AISGRHYWNRLRPLLLAAVAVTLSAVPSHAQDDDFFGSIAALFNPNPTSRQTPVIDATPYTLNIEVQGGDSSLKNAVTQA
SNLESLKDRPPSGAAGLVRRALSDFERITAALYGEGRYGATIHITVAGIAPNAPNIFDVVERARKAGPVPVQVVVDPGPP
FVFGDIRILDAATRRPLAEGPSLRALGLEPGESARADRVVRAEAVVVDFWRERGHPFARLTGKDVVADHATHRLNVTLLV
ETGPVATFGTFTVSGADFLPPNFIEERVEIPPGTPYSPDRLTRLRKRLLTIQAIASVRIREGERLDAQGRLPIYIEVRPR
DPRYVGFSAKYSSTDGSSINGFWGHRNLFGGGETLRLDASVSWFGGVPEAVPNADPFGYKLAASFVKPGIWTPQDDLILN
AAILREVTNAYVREGVVALLAVRHRFDDQLSMQVGVDFEDGQVEDTTGIYNALVTGIPVDLFYDTTDNALDPSRGIRLNA
TVEPFAYLGDSGAGPVMLKAALSAYHAFDDDRRIIIAGRVAAGSLVGVGDLYDVPPQRRFYVGGGGSVRGYDYQSASPRN
AFGQIVGGLSFFEASAELRVRITDTIGIVPFFDMGSAFATEYPDFSGLKYSAGIGLRYYTPIGPLRVDFAVPLNPGPDDG
SFGVYVSLGQAF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=426, Percent_Identity=22.7699530516432, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 70412; Mature: 70281

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISGRHYWNRLRPLLLAAVAVTLSAVPSHAQDDDFFGSIAALFNPNPTSRQTPVIDATP
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEHEEECCCCCCCCCCEEECCC
YTLNIEVQGGDSSLKNAVTQASNLESLKDRPPSGAAGLVRRALSDFERITAALYGEGRYG
EEEEEEEECCCHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
ATIHITVAGIAPNAPNIFDVVERARKAGPVPVQVVVDPGPPFVFGDIRILDAATRRPLAE
CEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEECEEEEEHHHCCCCCC
GPSLRALGLEPGESARADRVVRAEAVVVDFWRERGHPFARLTGKDVVADHATHRLNVTLL
CCCEEEECCCCCCCCCCCCEEHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCEEEEEEEE
VETGPVATFGTFTVSGADFLPPNFIEERVEIPPGTPYSPDRLTRLRKRLLTIQAIASVRI
EECCCCEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEE
REGERLDAQGRLPIYIEVRPRDPRYVGFSAKYSSTDGSSINGFWGHRNLFGGGETLRLDA
CCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEC
SVSWFGGVPEAVPNADPFGYKLAASFVKPGIWTPQDDLILNAAILREVTNAYVREGVVAL
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAVRHRFDDQLSMQVGVDFEDGQVEDTTGIYNALVTGIPVDLFYDTTDNALDPSRGIRLN
HHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEE
ATVEPFAYLGDSGAGPVMLKAALSAYHAFDDDRRIIIAGRVAAGSLVGVGDLYDVPPQRR
EECCCHHEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEECCCCCCCCCCCE
FYVGGGGSVRGYDYQSASPRNAFGQIVGGLSFFEASAELRVRITDTIGIVPFFDMGSAFA
EEECCCCCCCCCCCCCCCCCHHHHHHHCCHHHEECCCEEEEEEEEEECCEEEECCCCHHH
TEYPDFSGLKYSAGIGLRYYTPIGPLRVDFAVPLNPGPDDGSFGVYVSLGQAF
HCCCCCCCEEEECCCCEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure 
AISGRHYWNRLRPLLLAAVAVTLSAVPSHAQDDDFFGSIAALFNPNPTSRQTPVIDATP
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEHEEECCCCCCCCCCEEECCC
YTLNIEVQGGDSSLKNAVTQASNLESLKDRPPSGAAGLVRRALSDFERITAALYGEGRYG
EEEEEEEECCCHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
ATIHITVAGIAPNAPNIFDVVERARKAGPVPVQVVVDPGPPFVFGDIRILDAATRRPLAE
CEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEECEEEEEHHHCCCCCC
GPSLRALGLEPGESARADRVVRAEAVVVDFWRERGHPFARLTGKDVVADHATHRLNVTLL
CCCEEEECCCCCCCCCCCCEEHHHHHHHHHHHHCCCCEEEECCCHHHHCCCCEEEEEEEE
VETGPVATFGTFTVSGADFLPPNFIEERVEIPPGTPYSPDRLTRLRKRLLTIQAIASVRI
EECCCCEEEEEEEECCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEE
REGERLDAQGRLPIYIEVRPRDPRYVGFSAKYSSTDGSSINGFWGHRNLFGGGETLRLDA
CCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEC
SVSWFGGVPEAVPNADPFGYKLAASFVKPGIWTPQDDLILNAAILREVTNAYVREGVVAL
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LAVRHRFDDQLSMQVGVDFEDGQVEDTTGIYNALVTGIPVDLFYDTTDNALDPSRGIRLN
HHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEE
ATVEPFAYLGDSGAGPVMLKAALSAYHAFDDDRRIIIAGRVAAGSLVGVGDLYDVPPQRR
EECCCHHEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEECCCCCCCCCCCE
FYVGGGGSVRGYDYQSASPRNAFGQIVGGLSFFEASAELRVRITDTIGIVPFFDMGSAFA
EEECCCCCCCCCCCCCCCCCHHHHHHHCCHHHEECCCEEEEEEEEEECCEEEECCCCHHH
TEYPDFSGLKYSAGIGLRYYTPIGPLRVDFAVPLNPGPDDGSFGVYVSLGQAF
HCCCCCCCEEEECCCCEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]