Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is braD [H]
Identifier: 154248136
GI number: 154248136
Start: 4669006
End: 4670898
Strand: Direct
Name: braD [H]
Synonym: Xaut_4216
Alternate gene names: 154248136
Gene position: 4669006-4670898 (Clockwise)
Preceding gene: 154248135
Following gene: 154248137
Centisome position: 87.95
GC content: 69.04
Gene sequence:
>1893_bases GTGGAATTCCTGTTGGTCCAGGCCCTGAGCGGGCTCGCCAGCGCCGCGTCGCTGTTTCTGGTGGCGTCGGGCCTGTCGAT CATCTTCGGCGTGACGCGCATTGTGAATTTCGCGCACGGCGCCTTCTACATGCTGGGCGCCTACGTGGCCTATGTGCTCA CCACGCGCTTTGCCGGCCCCATCGGCTTCTGGGGCGCGATCCTCGCTGCCTCGGTCATCGTCGCGGCGCTGGGCGCGCTG ATGGAAATGGTGCTGCTGCGCCGCATCTACCACGCTCCCGAACTGTTCCAGCTCCTCGCCACCTTCGGCGTGACGCTCAT GGTGCAGGACCTGGTGGTGGTGATCTGGGGTCCCGAGGACCTGCTCGGCCCGCGCGCCCCCGGCCTTGCCGGCGCGGTCA GCCTGTTCGGCCGCATGGTGCCCACCTACGATCTGTTCCTGATGGTGCTTGGCCCGGTGGTGCTCGGCGCGCTGTGGTTG TTGTTCCACCAGACCCGCTGGGGCGTTCTGGTGCGCGCAGCGACGCAGGACCGCGAGATGGTGGCGGCCCTCGGCGTGAA CCAGAAATGGCTCTTCACCGGTGTGTTCGCCCTCGGCGTCTTCCTCGCCGCGCTGGGCGGCGCCCTGCAGATCCCGCGCA CCACGGTGACCCACACCATGGACCTCTCCGTCATCGTCGAGGTGTTCGTGGTGGTGGTCATCGGCGGGCTCGGCTCGGTG CTGGGGGCGTTCGTCGCCGCCATCATCGTGGCGGAGCTGAACGCCTTCGGCATTCTCATCCTGCCGCAGATCTCGCTCAT CATGGTGTTCCTGGTGATGGCGGTGGTGCTGGTGGTGCGGCCCTGGGGCCTGTTCGGCAAGGCCGAGAGCGCGCCGCGCC CCGCCGCCGGCCTCACCATCCGGCCGTGGCGGCCGTTCTCCACCGCCGAGCGGGTGGCGGTGGCCGTGGCGGTGGCGGCC GTGGCGACGCTGCCCTTCTTCCTCGGCAACTACGCCCTCACCGTCGGCGCGGAAATCCTCATCTTCGTGCTGTTCGCCGC CAGCCTGCATTTCATCATGACCGTGGGCGGCCTCGCCTCCTTCGGCCATGCCGCCTATTTCGGCCTCGGCGCGTATGGCG CGGCCTTCATGGTGAAGTTCCTCGGCGCGCCCATGGAGGCGGCCCTCATCGTCGGCCCGGCCCTTGGGCTGGTGGGGGCG GTGCTGTTCGGCTGGTTCTGCGTGCGGCTCTCGGGCGTCTATTTCGCCATGCTGACGCTGGCCTTCGCGCAGATCGCCTG GTCCGTGGCCTTCCAGTGGGTGGACGTGACCGGCGGCGATAACGGCCTGCTGGGCATCTGGCCCTCGGCGTGGGCGGCCA AGCCCCAGGGCTTCTTTTGGCTGGCGCTGGCGGTGGCGGTGATCGGCGTCGGCCTGTTGCGGATGCTGGTGTTCTCGCCC TTCGGCTACGGCCTGCGGGCGGTGCGCGACAGCACCCTGCGCGCAGAGGCCATCGGGCTGGATCGGGCGCGGCTACAGTG GGCCGCCTTCGTGGTCGCCGGCACCTTCGCCGGCATCGCCGGTGCGCTGTTTGCCTTCCTGAAGGGCTCGGTGTTCCCGG ACTTCATGGGCATCCCGACCTCGGTGGACGGCCTTGTGATGGTGTTGCTCGGCGGCATCGAGACGGTGTCCGGCGCGGTG GTGGGGGCGGTGCTCTACAAGGCGCTCGCCATCTGGCTCATGAGCCAGACCGATCTCTCCAAGCTGGTGCTGGGGGCGGT GATCGTGGTGGTGGTGCTGGCCTTCCCGAAGGGGGTGGTGGGCTTCATCGAGGACATGCGCCACCGCTGGTTCGCTCCAA AGAAACCCACGGCCGAGGCGGCGGCCCTCGCCAAGGTGGAGGCCGCGCGATGA
Upstream 100 bases:
>100_bases AGCCAGGGCGCCCGCGCCCCGGCGCAAGACCCACCTCCCTCGACGGCGGCGGGTCCAAGACCAAAATCCTTTCCAGGCCG GTGAACGAGAGGCGAGACAA
Downstream 100 bases:
>100_bases GCTTGCTGCTTCAGGTCGAGAACCTCGAAAAATCCTATGGCGGCGTCCATGCGGTGCGCGGCGTCACCTTCAGCCTGGAG GCCGGCACGCTTTTGGCCCT
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 630; Mature: 630
Protein sequence:
>630_residues MEFLLVQALSGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYVAYVLTTRFAGPIGFWGAILAASVIVAALGAL MEMVLLRRIYHAPELFQLLATFGVTLMVQDLVVVIWGPEDLLGPRAPGLAGAVSLFGRMVPTYDLFLMVLGPVVLGALWL LFHQTRWGVLVRAATQDREMVAALGVNQKWLFTGVFALGVFLAALGGALQIPRTTVTHTMDLSVIVEVFVVVVIGGLGSV LGAFVAAIIVAELNAFGILILPQISLIMVFLVMAVVLVVRPWGLFGKAESAPRPAAGLTIRPWRPFSTAERVAVAVAVAA VATLPFFLGNYALTVGAEILIFVLFAASLHFIMTVGGLASFGHAAYFGLGAYGAAFMVKFLGAPMEAALIVGPALGLVGA VLFGWFCVRLSGVYFAMLTLAFAQIAWSVAFQWVDVTGGDNGLLGIWPSAWAAKPQGFFWLALAVAVIGVGLLRMLVFSP FGYGLRAVRDSTLRAEAIGLDRARLQWAAFVVAGTFAGIAGALFAFLKGSVFPDFMGIPTSVDGLVMVLLGGIETVSGAV VGAVLYKALAIWLMSQTDLSKLVLGAVIVVVVLAFPKGVVGFIEDMRHRWFAPKKPTAEAAALAKVEAAR
Sequences:
>Translated_630_residues MEFLLVQALSGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYVAYVLTTRFAGPIGFWGAILAASVIVAALGAL MEMVLLRRIYHAPELFQLLATFGVTLMVQDLVVVIWGPEDLLGPRAPGLAGAVSLFGRMVPTYDLFLMVLGPVVLGALWL LFHQTRWGVLVRAATQDREMVAALGVNQKWLFTGVFALGVFLAALGGALQIPRTTVTHTMDLSVIVEVFVVVVIGGLGSV LGAFVAAIIVAELNAFGILILPQISLIMVFLVMAVVLVVRPWGLFGKAESAPRPAAGLTIRPWRPFSTAERVAVAVAVAA VATLPFFLGNYALTVGAEILIFVLFAASLHFIMTVGGLASFGHAAYFGLGAYGAAFMVKFLGAPMEAALIVGPALGLVGA VLFGWFCVRLSGVYFAMLTLAFAQIAWSVAFQWVDVTGGDNGLLGIWPSAWAAKPQGFFWLALAVAVIGVGLLRMLVFSP FGYGLRAVRDSTLRAEAIGLDRARLQWAAFVVAGTFAGIAGALFAFLKGSVFPDFMGIPTSVDGLVMVLLGGIETVSGAV VGAVLYKALAIWLMSQTDLSKLVLGAVIVVVVLAFPKGVVGFIEDMRHRWFAPKKPTAEAAALAKVEAAR >Mature_630_residues MEFLLVQALSGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYVAYVLTTRFAGPIGFWGAILAASVIVAALGAL MEMVLLRRIYHAPELFQLLATFGVTLMVQDLVVVIWGPEDLLGPRAPGLAGAVSLFGRMVPTYDLFLMVLGPVVLGALWL LFHQTRWGVLVRAATQDREMVAALGVNQKWLFTGVFALGVFLAALGGALQIPRTTVTHTMDLSVIVEVFVVVVIGGLGSV LGAFVAAIIVAELNAFGILILPQISLIMVFLVMAVVLVVRPWGLFGKAESAPRPAAGLTIRPWRPFSTAERVAVAVAVAA VATLPFFLGNYALTVGAEILIFVLFAASLHFIMTVGGLASFGHAAYFGLGAYGAAFMVKFLGAPMEAALIVGPALGLVGA VLFGWFCVRLSGVYFAMLTLAFAQIAWSVAFQWVDVTGGDNGLLGIWPSAWAAKPQGFFWLALAVAVIGVGLLRMLVFSP FGYGLRAVRDSTLRAEAIGLDRARLQWAAFVVAGTFAGIAGALFAFLKGSVFPDFMGIPTSVDGLVMVLLGGIETVSGAV VGAVLYKALAIWLMSQTDLSKLVLGAVIVVVVLAFPKGVVGFIEDMRHRWFAPKKPTAEAAALAKVEAAR
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=303, Percent_Identity=24.0924092409241, Blast_Score=83, Evalue=6e-17, Organism=Escherichia coli, GI1789866, Length=302, Percent_Identity=25.8278145695364, Blast_Score=80, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 66456; Mature: 66456
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFLLVQALSGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYVAYVLTTRFAGP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IGFWGAILAASVIVAALGALMEMVLLRRIYHAPELFQLLATFGVTLMVQDLVVVIWGPED HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEECCHH LLGPRAPGLAGAVSLFGRMVPTYDLFLMVLGPVVLGALWLLFHQTRWGVLVRAATQDREM HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCHHH VAALGVNQKWLFTGVFALGVFLAALGGALQIPRTTVTHTMDLSVIVEVFVVVVIGGLGSV HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAFVAAIIVAELNAFGILILPQISLIMVFLVMAVVLVVRPWGLFGKAESAPRPAAGLTI HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE RPWRPFSTAERVAVAVAVAAVATLPFFLGNYALTVGAEILIFVLFAASLHFIMTVGGLAS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGHAAYFGLGAYGAAFMVKFLGAPMEAALIVGPALGLVGAVLFGWFCVRLSGVYFAMLTL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFAQIAWSVAFQWVDVTGGDNGLLGIWPSAWAAKPQGFFWLALAVAVIGVGLLRMLVFSP HHHHHHHHHHHHEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC FGYGLRAVRDSTLRAEAIGLDRARLQWAAFVVAGTFAGIAGALFAFLKGSVFPDFMGIPT CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SVDGLVMVLLGGIETVSGAVVGAVLYKALAIWLMSQTDLSKLVLGAVIVVVVLAFPKGVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHH GFIEDMRHRWFAPKKPTAEAAALAKVEAAR HHHHHHHHHCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MEFLLVQALSGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYVAYVLTTRFAGP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC IGFWGAILAASVIVAALGALMEMVLLRRIYHAPELFQLLATFGVTLMVQDLVVVIWGPED HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEECCHH LLGPRAPGLAGAVSLFGRMVPTYDLFLMVLGPVVLGALWLLFHQTRWGVLVRAATQDREM HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCHHH VAALGVNQKWLFTGVFALGVFLAALGGALQIPRTTVTHTMDLSVIVEVFVVVVIGGLGSV HHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGAFVAAIIVAELNAFGILILPQISLIMVFLVMAVVLVVRPWGLFGKAESAPRPAAGLTI HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEE RPWRPFSTAERVAVAVAVAAVATLPFFLGNYALTVGAEILIFVLFAASLHFIMTVGGLAS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGHAAYFGLGAYGAAFMVKFLGAPMEAALIVGPALGLVGAVLFGWFCVRLSGVYFAMLTL HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFAQIAWSVAFQWVDVTGGDNGLLGIWPSAWAAKPQGFFWLALAVAVIGVGLLRMLVFSP HHHHHHHHHHHHEEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC FGYGLRAVRDSTLRAEAIGLDRARLQWAAFVVAGTFAGIAGALFAFLKGSVFPDFMGIPT CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC SVDGLVMVLLGGIETVSGAVVGAVLYKALAIWLMSQTDLSKLVLGAVIVVVVLAFPKGVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHH GFIEDMRHRWFAPKKPTAEAAALAKVEAAR HHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043; 2509433 [H]