Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is livK [C]
Identifier: 154248135
GI number: 154248135
Start: 4667471
End: 4668679
Strand: Direct
Name: livK [C]
Synonym: Xaut_4215
Alternate gene names: 154248135
Gene position: 4667471-4668679 (Clockwise)
Preceding gene: 154248134
Following gene: 154248136
Centisome position: 87.92
GC content: 65.26
Gene sequence:
>1209_bases ATGAAGAAACTCATCGGCGCAACTTTCGGGGCGACCTTCGCCGCCCTGCTGCTCGCCTCCGGTGCCGCGAAGGCGCTCGA AGGCGAGATCAAGGTGGGCGAGATCAATTCCTATTCGGCGCTGCCCGCCTTCACCGAGCCCTATCGCAAGGGCATGGAAC TGGCGCTGAAGGAGATCAACGACGCCGGCGGCATCAAGGGCAAGAAGCTGGTCATCATCTCCAAGGATGACGGCGGCAAG CCCGCCGACGCCCTCACCGCCGCCAACGAGCTGGTCTCGCGCGACGGCGTGGTGATGATCTCCGGCGGCTTCCTTTCCAA CGTGGGCCTCGCGCTGGCGGACTTCGCCAAGCAGAAGCAGGTGGTCTACATCGCCGCCGAGCCGCTCACCGACGCCATCG TCTGGTCGAAGGGCAACGACTACACCTTCCGCCTGCGCACCTCCAACTACATGCAGGCCGCCATGCTGGCGGAAGAGGCG GCCAAGCTCCCCGCCAAGAAGTGGGCCACCATCGCCCCCAATTATGAATTCGGCCAGTCGTTCGTGGCCGTGTTCAAGGA GCTGCTGAAGAAGAAGCGCCCGGACGTGGAGTTCGTGGCCGAGCAGTGGCCGCCGCTCAACAAGATCGACGCCGGCCCGG TGCTGCAGGCCATCGACGCCGCCAAGCCCGACGCCATCCTCAACGCCACCTTCGCCGGCGACCTGGTTAAGCTGGTGCGC GAGGGCAATACCCGCGGCATCTTCAAGGACCGCGCGGTGGTGAGCTATCTCACCGGCGAGCCGGAATATCTCGACCCGCT GAAGACCGAGACGCCGGAAGGCTGGATCGTCACCGGCTATCCCTGGTACGGCATCAAGACCGCCGAGCACCAGGCGTTCC TCGACGCCTACCAGCAGCTCCACAAGGACTATCCGCGCCTCGGCTCCATCGTCGGCTACTCGACGGTGAAGTCCATCGCG GCGGTGCTGAAGGCCACCGACGACCACACCACCGACGGCATCGTCAAGGCCATGAAGAACCTGAAGGTTTCCACCCCCTT CGGCGACATCGTCTATCGCGCCGCCGACCACCAGTCGACGCTGGGCGCCTATATCGGCACCACCGCGCAGCAGGACGGCA AGGGCGTGATGGTGAACTTCACCTTCAAGCCCGGCGCCGACTACCTGCCGCCGGAAGCCGAAGCCGCCAAGCTGCGCCCG GCGAACTGA
Upstream 100 bases:
>100_bases GCGGGCTGAAGGCGGACGAGATCAAGGGTGAGGACGGCTTGCGCTGAACCGGACGGCGCAGCCTGTAGTGCAGGACTTCG GATCAAGAGGGGAACAGCAC
Downstream 100 bases:
>100_bases AGTTGTCTCCCTCCCCCGCACGCGGGAGAGGGGGCAGGGCAGGACCATTCAAGCCGTCATGGCCGGGCTTGACCCGGCCA TCCACGGGGACGGGCCGGGA
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MKKLIGATFGATFAALLLASGAAKALEGEIKVGEINSYSALPAFTEPYRKGMELALKEINDAGGIKGKKLVIISKDDGGK PADALTAANELVSRDGVVMISGGFLSNVGLALADFAKQKQVVYIAAEPLTDAIVWSKGNDYTFRLRTSNYMQAAMLAEEA AKLPAKKWATIAPNYEFGQSFVAVFKELLKKKRPDVEFVAEQWPPLNKIDAGPVLQAIDAAKPDAILNATFAGDLVKLVR EGNTRGIFKDRAVVSYLTGEPEYLDPLKTETPEGWIVTGYPWYGIKTAEHQAFLDAYQQLHKDYPRLGSIVGYSTVKSIA AVLKATDDHTTDGIVKAMKNLKVSTPFGDIVYRAADHQSTLGAYIGTTAQQDGKGVMVNFTFKPGADYLPPEAEAAKLRP AN
Sequences:
>Translated_402_residues MKKLIGATFGATFAALLLASGAAKALEGEIKVGEINSYSALPAFTEPYRKGMELALKEINDAGGIKGKKLVIISKDDGGK PADALTAANELVSRDGVVMISGGFLSNVGLALADFAKQKQVVYIAAEPLTDAIVWSKGNDYTFRLRTSNYMQAAMLAEEA AKLPAKKWATIAPNYEFGQSFVAVFKELLKKKRPDVEFVAEQWPPLNKIDAGPVLQAIDAAKPDAILNATFAGDLVKLVR EGNTRGIFKDRAVVSYLTGEPEYLDPLKTETPEGWIVTGYPWYGIKTAEHQAFLDAYQQLHKDYPRLGSIVGYSTVKSIA AVLKATDDHTTDGIVKAMKNLKVSTPFGDIVYRAADHQSTLGAYIGTTAQQDGKGVMVNFTFKPGADYLPPEAEAAKLRP AN >Mature_402_residues MKKLIGATFGATFAALLLASGAAKALEGEIKVGEINSYSALPAFTEPYRKGMELALKEINDAGGIKGKKLVIISKDDGGK PADALTAANELVSRDGVVMISGGFLSNVGLALADFAKQKQVVYIAAEPLTDAIVWSKGNDYTFRLRTSNYMQAAMLAEEA AKLPAKKWATIAPNYEFGQSFVAVFKELLKKKRPDVEFVAEQWPPLNKIDAGPVLQAIDAAKPDAILNATFAGDLVKLVR EGNTRGIFKDRAVVSYLTGEPEYLDPLKTETPEGWIVTGYPWYGIKTAEHQAFLDAYQQLHKDYPRLGSIVGYSTVKSIA AVLKATDDHTTDGIVKAMKNLKVSTPFGDIVYRAADHQSTLGAYIGTTAQQDGKGVMVNFTFKPGADYLPPEAEAAKLRP AN
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 43357; Mature: 43357
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIGATFGATFAALLLASGAAKALEGEIKVGEINSYSALPAFTEPYRKGMELALKEIN CCCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH DAGGIKGKKLVIISKDDGGKPADALTAANELVSRDGVVMISGGFLSNVGLALADFAKQKQ HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCE VVYIAAEPLTDAIVWSKGNDYTFRLRTSNYMQAAMLAEEAAKLPAKKWATIAPNYEFGQS EEEEEECCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCHHHCEEECCCHHHHHH FVAVFKELLKKKRPDVEFVAEQWPPLNKIDAGPVLQAIDAAKPDAILNATFAGDLVKLVR HHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHH EGNTRGIFKDRAVVSYLTGEPEYLDPLKTETPEGWIVTGYPWYGIKTAEHQAFLDAYQQL CCCCCCEECCCHHEEEECCCCHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH HKDYPRLGSIVGYSTVKSIAAVLKATDDHTTDGIVKAMKNLKVSTPFGDIVYRAADHQST HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHEECCCCCHH LGAYIGTTAQQDGKGVMVNFTFKPGADYLPPEAEAAKLRPAN HHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKLIGATFGATFAALLLASGAAKALEGEIKVGEINSYSALPAFTEPYRKGMELALKEIN CCCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH DAGGIKGKKLVIISKDDGGKPADALTAANELVSRDGVVMISGGFLSNVGLALADFAKQKQ HCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCE VVYIAAEPLTDAIVWSKGNDYTFRLRTSNYMQAAMLAEEAAKLPAKKWATIAPNYEFGQS EEEEEECCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCHHHCEEECCCHHHHHH FVAVFKELLKKKRPDVEFVAEQWPPLNKIDAGPVLQAIDAAKPDAILNATFAGDLVKLVR HHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCEEEHHHHHHHHHHHH EGNTRGIFKDRAVVSYLTGEPEYLDPLKTETPEGWIVTGYPWYGIKTAEHQAFLDAYQQL CCCCCCEECCCHHEEEECCCCHHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH HKDYPRLGSIVGYSTVKSIAAVLKATDDHTTDGIVKAMKNLKVSTPFGDIVYRAADHQST HHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHEECCCCCHH LGAYIGTTAQQDGKGVMVNFTFKPGADYLPPEAEAAKLRPAN HHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA