Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is braC [H]
Identifier: 154247974
GI number: 154247974
Start: 4484531
End: 4485751
Strand: Direct
Name: braC [H]
Synonym: Xaut_4053
Alternate gene names: 154247974
Gene position: 4484531-4485751 (Clockwise)
Preceding gene: 154247967
Following gene: 154247975
Centisome position: 84.47
GC content: 65.52
Gene sequence:
>1221_bases ATGCGAGTGAGCGGAATGATTGCGGCTGTCGCCGCAAGCATCGCTATGGCTGGCGTCTCCATCGCAGGCGTCGCCGTGGC CGCGGAACCCATCAAGATTGGCCTCAGCGGCCCCTTCACCGGCGGTTCGTCCTCCATGGGCGTGAGCATGCGCGACGGCG TGAAGCTCGCGGTGACGGAAATCAACAAGAACGGCGGCGTGCTCGGCCGCCAGCTGGTGCTGGTCGAGCGTGACGACGAG GCCAAGAACGAGGTGGGCGTGCAGATCGCCCAGGAGCTCATCAACAAGGAAGGGGTGGTCGCCACCCTCGGCTATATCAA TACCGGCGTGGCCCTCGCCTCGCAGCGCTTCTACCAGGAAGCGGAAATCCCGGTGATCAACAACGTGGCCACCGGCACGC TGATTTCCAAGCAGTTCCTGCCGCCGGACAACAAGTCCAACTACATCTTCCGCACCTCCGCCAACGACGCGATCCAGAGC GTCATGATCGCGGATGAGGCGGTGAAGCGGCAGGGCTTCAAGAAGCCGGCCATCCTCGCCGACTCGACCAATTACGGCCA GCTCGGCCGCGCCGACCTCGAGAAGGCGCTGGCGGTCCTGAACGTGAAGCCGGTGGTGACCGAGAAGTTCAACATCGGCG ACACCGACATGACCGCGCAGCTGCTGCGCGCCAAGGAAGCCGGCGCCGATGTGATCCTCACCTACGCCATCGGCCCCGAG CTGGCGCAGATCGCCAACGGCATGGCCAAGCTGGGCTGGAAGGTGCCCATGATCGGCTCCTGGACCCTGTCCATGGCCAG CTTCATCGACACCGCCGGCCCCAACGGCGATGGCGCGCTGATGCCCCAGACCTTCATCCAGCTGCCCGATACCCCCAAGC GCAAGGCCTTCATCGAGGCCTATCAGGCGGCCTACAAGATCGACCGCATGCCGTCCCCGGTGTCGGCCGCCCAGGGCTAT GACTCGGTGTTCCTGCTCGCCGCAGCCATCACCCAGGCCGGCTCCACCGACGGCCGCAAGATCCGCGAAGCGCTGGAAAA CCTGAACACCAAGGTGGAAGGCGTGGTCACCGTCTACGACCGCCCCTTCAGCGCCACTGACCATGAGGCCATCACCGGCA ACATCCCGGTGTTCGGCCTGGTGAAGGGCGGCCGCGTGGTCGCCGCCCATCCCGAGGACATCGCCGGCGACAAGGCGGTC CGGGTGAAGCCCAAGAACTGA
Upstream 100 bases:
>100_bases GTCTATCGTCGCCAATTGGCTTAAACGATTCAGGCCTAACCGGCGAAGAAGCCGGATCGAACCAATAAAGCCTCAGAATC GGGCAACCAGGGAGTGAATC
Downstream 100 bases:
>100_bases GCGCGATCGGTCGCAACTGATCGGCCGGCAGCCTTTTCGCCGGCCGGCGACGAGAAGCCCGCCCGGTGGGCTTGCGCGTG CCGGGTGGCGGCCTTTCCCG
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MRVSGMIAAVAASIAMAGVSIAGVAVAAEPIKIGLSGPFTGGSSSMGVSMRDGVKLAVTEINKNGGVLGRQLVLVERDDE AKNEVGVQIAQELINKEGVVATLGYINTGVALASQRFYQEAEIPVINNVATGTLISKQFLPPDNKSNYIFRTSANDAIQS VMIADEAVKRQGFKKPAILADSTNYGQLGRADLEKALAVLNVKPVVTEKFNIGDTDMTAQLLRAKEAGADVILTYAIGPE LAQIANGMAKLGWKVPMIGSWTLSMASFIDTAGPNGDGALMPQTFIQLPDTPKRKAFIEAYQAAYKIDRMPSPVSAAQGY DSVFLLAAAITQAGSTDGRKIREALENLNTKVEGVVTVYDRPFSATDHEAITGNIPVFGLVKGGRVVAAHPEDIAGDKAV RVKPKN
Sequences:
>Translated_406_residues MRVSGMIAAVAASIAMAGVSIAGVAVAAEPIKIGLSGPFTGGSSSMGVSMRDGVKLAVTEINKNGGVLGRQLVLVERDDE AKNEVGVQIAQELINKEGVVATLGYINTGVALASQRFYQEAEIPVINNVATGTLISKQFLPPDNKSNYIFRTSANDAIQS VMIADEAVKRQGFKKPAILADSTNYGQLGRADLEKALAVLNVKPVVTEKFNIGDTDMTAQLLRAKEAGADVILTYAIGPE LAQIANGMAKLGWKVPMIGSWTLSMASFIDTAGPNGDGALMPQTFIQLPDTPKRKAFIEAYQAAYKIDRMPSPVSAAQGY DSVFLLAAAITQAGSTDGRKIREALENLNTKVEGVVTVYDRPFSATDHEAITGNIPVFGLVKGGRVVAAHPEDIAGDKAV RVKPKN >Mature_406_residues MRVSGMIAAVAASIAMAGVSIAGVAVAAEPIKIGLSGPFTGGSSSMGVSMRDGVKLAVTEINKNGGVLGRQLVLVERDDE AKNEVGVQIAQELINKEGVVATLGYINTGVALASQRFYQEAEIPVINNVATGTLISKQFLPPDNKSNYIFRTSANDAIQS VMIADEAVKRQGFKKPAILADSTNYGQLGRADLEKALAVLNVKPVVTEKFNIGDTDMTAQLLRAKEAGADVILTYAIGPE LAQIANGMAKLGWKVPMIGSWTLSMASFIDTAGPNGDGALMPQTFIQLPDTPKRKAFIEAYQAAYKIDRMPSPVSAAQGY DSVFLLAAAITQAGSTDGRKIREALENLNTKVEGVVTVYDRPFSATDHEAITGNIPVFGLVKGGRVVAAHPEDIAGDKAV RVKPKN
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=337, Percent_Identity=24.6290801186944, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI48994941, Length=292, Percent_Identity=25.3424657534247, Blast_Score=80, Evalue=3e-16,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42788; Mature: 42788
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVSGMIAAVAASIAMAGVSIAGVAVAAEPIKIGLSGPFTGGSSSMGVSMRDGVKLAVTE CCCCHHHHHHHHHHHHHCHHHHEEEEEECCEEEECCCCCCCCCCCCCEECCCCEEEEEEE INKNGGVLGRQLVLVERDDEAKNEVGVQIAQELINKEGVVATLGYINTGVALASQRFYQE ECCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHH AEIPVINNVATGTLISKQFLPPDNKSNYIFRTSANDAIQSVMIADEAVKRQGFKKPAILA CCCCEECCCCCCCCHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEE DSTNYGQLGRADLEKALAVLNVKPVVTEKFNIGDTDMTAQLLRAKEAGADVILTYAIGPE CCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCH LAQIANGMAKLGWKVPMIGSWTLSMASFIDTAGPNGDGALMPQTFIQLPDTPKRKAFIEA HHHHHHHHHHCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCHHHHHHHH YQAAYKIDRMPSPVSAAQGYDSVFLLAAAITQAGSTDGRKIREALENLNTKVEGVVTVYD HHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEC RPFSATDHEAITGNIPVFGLVKGGRVVAAHPEDIAGDKAVRVKPKN CCCCCCCCCEEECCCCEEEEEECCEEEEECCCCCCCCCEEEEECCC >Mature Secondary Structure MRVSGMIAAVAASIAMAGVSIAGVAVAAEPIKIGLSGPFTGGSSSMGVSMRDGVKLAVTE CCCCHHHHHHHHHHHHHCHHHHEEEEEECCEEEECCCCCCCCCCCCCEECCCCEEEEEEE INKNGGVLGRQLVLVERDDEAKNEVGVQIAQELINKEGVVATLGYINTGVALASQRFYQE ECCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHH AEIPVINNVATGTLISKQFLPPDNKSNYIFRTSANDAIQSVMIADEAVKRQGFKKPAILA CCCCEECCCCCCCCHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEE DSTNYGQLGRADLEKALAVLNVKPVVTEKFNIGDTDMTAQLLRAKEAGADVILTYAIGPE CCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCH LAQIANGMAKLGWKVPMIGSWTLSMASFIDTAGPNGDGALMPQTFIQLPDTPKRKAFIEA HHHHHHHHHHCCCCCCEECCHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCHHHHHHHH YQAAYKIDRMPSPVSAAQGYDSVFLLAAAITQAGSTDGRKIREALENLNTKVEGVVTVYD HHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEEEC RPFSATDHEAITGNIPVFGLVKGGRVVAAHPEDIAGDKAVRVKPKN CCCCCCCCCEEECCCCEEEEEECCEEEEECCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]