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The map label for this gene is ybjL [C]

Identifier: 154247861

GI number: 154247861

Start: 4360773

End: 4362452

Strand: Direct

Name: ybjL [C]

Synonym: Xaut_3938

Alternate gene names: 154247861

Gene position: 4360773-4362452 (Clockwise)

Preceding gene: 154247860

Following gene: 154247862

Centisome position: 82.14

GC content: 64.76

Gene sequence:

>1680_bases
ATGAACTACTTCGTCGGAACGCTCCAAAAGTATCCGGAGATTGCGCTTTTCCTGACCATCGGCATCGGATTCTGGATCGG
GAATCTGAAGCTTGGAAAATTCAATCTCGGCGTCGTCACCAGCACCTTGCTGGCCGGTCTTCTCGTCGGGCAGATCGGCA
TCAAGCTGCCCGCCGTCATGCAGTCCACCTTCTTCGCCATGTTCCTGTTCTCGGTGGGCTATGCGGTGGGCCCGCAGTTC
ATCCGCGCGCTGAAGAGCGATGGCCTGCCCCAGGTGGTGTTCGCCATCCTGATCTGCCTTGCCGGCACGGTGACGGCGAT
CGTCCTTGGCAAGCTGCTCGGCTACAACGCCGCGCTCACCGCCGGCCTGCTGTCGGGCGGCTACACCAACTCGACGGTGC
TCGGTGTGGCGGCCGACCTCATGAACCAGTCCGGCCTTCAGCCGGACGAGCTGAAGGCGGCGCTGGCGCTGCTGCCGGTG
GCCTATGCGGTGACCTATCCGTTCGGCACCATCGGCTCGGCCTTCATGCTCGCCAACATTGCGCCCAAGGTGCTCGGCTT
CGACCTCGTGAAGGTGTGCCAGGACTATGAGCGCGAGCACGGCGGCAACAAGATCGGCACCACGGCCTATCGCGAATTCT
CGGCCCGCGCCGTCAAGCTCGCAAACACCGGCCTGGTGGGCAAGACGGTCGAGGACGTGGAGAAGATGTTCCACAACGAG
ATCTTCATCCGCCGCATGCGCACCTCTGCCGAGGGCCCGATCGTCGACTGCAAGCGCGATACGGTGCTGACGGAAGGAGC
GATCCTCGCCGTCTCCGGCGGCCTGTCGGCCCTTCTCGCCTATGCCGATGAGTTCGGCCCCGAGCTGAAGGACGTGCCGC
TGCTCGACTTCTCGACCGAGTTGCTCGACCTCGTGGTCACCAACAAGGCCTATGCCGGCAAGACCCTGGGCGAATTGATC
CACACCCTGTTCGGCGAGCCCGGCCGAGGCGTGTTCCTCACCAAGTTCACCCGCTCGGATGTGGCCATGGCCATGGGCGA
GCAGGTGAAGGTGCAGCGGGGCGACGTGCTCACCATCCTTGGCGCCAAGGCGGACGTGGCCAAGATCGCCAAGGTGCTGG
GCTATGCCGACCGTCCCGTGGAAGGCTCGGACATGGCGTTCATGGCCTTCGGCATCGTGTTCGGCAGCCTCATCGGGGCC
TTCACGATCCGCATCGGCGGCATCCCGCTGTCGCTGGGCACCGCCGTGGGCGCCATCGTGGCCGGCATCATTTGCGGCTA
CCTGCGCTCCACCATGCGCACCTTCGGCCACATCCCCGGGCCGGCCATCTGGGTGTTCAACAATGTGGGCCTCAACGGCT
TCATCGCCTGCATCGGCCTCAACGCGGCGCTCGGCTTCGTGGGTGGTATCCAGAACTACGGCCTCACCCTGTTCCTGGCC
GGCACCCTTGTGACCCTAGTTCCGATCATCGTCGGCCTGCTGCTCGGACACTTCGTGTTCAAGTTCCACCCCGGCATCAT
GCTCGGCGCCGTGGCCGGTGCCCGCTCCACCACGGCGGCCCTCGGCGCGCTGCAGGAAGCCTCCAAGAGCAACGTCCCGG
TGGTGGGCTATGCCACCGGCTACGCGGTCTCCCGCCTGGTGATGGCGCTTTTGACCATCGTGGTGGTCAACGCCTTCTGA

Upstream 100 bases:

>100_bases
CCTTCGGTCGAGACGGGACGAAAGCTACCCCGCTCAGGGTGTTGAAGCCTGAGCGGGGCGGGCGCTGGGCTGTCTTGGCC
GGAACATCGGACATGCCATC

Downstream 100 bases:

>100_bases
ACGTCGCCCACCGACCAATCCTTGATGCCGCCGTCCCTCGGGGAGGGCGGCATCCGGGCCGTCAGGGACTGCTCCCTTCT
CCAATACGATACGGGTCTCG

Product: YidE/YbjL protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MNYFVGTLQKYPEIALFLTIGIGFWIGNLKLGKFNLGVVTSTLLAGLLVGQIGIKLPAVMQSTFFAMFLFSVGYAVGPQF
IRALKSDGLPQVVFAILICLAGTVTAIVLGKLLGYNAALTAGLLSGGYTNSTVLGVAADLMNQSGLQPDELKAALALLPV
AYAVTYPFGTIGSAFMLANIAPKVLGFDLVKVCQDYEREHGGNKIGTTAYREFSARAVKLANTGLVGKTVEDVEKMFHNE
IFIRRMRTSAEGPIVDCKRDTVLTEGAILAVSGGLSALLAYADEFGPELKDVPLLDFSTELLDLVVTNKAYAGKTLGELI
HTLFGEPGRGVFLTKFTRSDVAMAMGEQVKVQRGDVLTILGAKADVAKIAKVLGYADRPVEGSDMAFMAFGIVFGSLIGA
FTIRIGGIPLSLGTAVGAIVAGIICGYLRSTMRTFGHIPGPAIWVFNNVGLNGFIACIGLNAALGFVGGIQNYGLTLFLA
GTLVTLVPIIVGLLLGHFVFKFHPGIMLGAVAGARSTTAALGALQEASKSNVPVVGYATGYAVSRLVMALLTIVVVNAF

Sequences:

>Translated_559_residues
MNYFVGTLQKYPEIALFLTIGIGFWIGNLKLGKFNLGVVTSTLLAGLLVGQIGIKLPAVMQSTFFAMFLFSVGYAVGPQF
IRALKSDGLPQVVFAILICLAGTVTAIVLGKLLGYNAALTAGLLSGGYTNSTVLGVAADLMNQSGLQPDELKAALALLPV
AYAVTYPFGTIGSAFMLANIAPKVLGFDLVKVCQDYEREHGGNKIGTTAYREFSARAVKLANTGLVGKTVEDVEKMFHNE
IFIRRMRTSAEGPIVDCKRDTVLTEGAILAVSGGLSALLAYADEFGPELKDVPLLDFSTELLDLVVTNKAYAGKTLGELI
HTLFGEPGRGVFLTKFTRSDVAMAMGEQVKVQRGDVLTILGAKADVAKIAKVLGYADRPVEGSDMAFMAFGIVFGSLIGA
FTIRIGGIPLSLGTAVGAIVAGIICGYLRSTMRTFGHIPGPAIWVFNNVGLNGFIACIGLNAALGFVGGIQNYGLTLFLA
GTLVTLVPIIVGLLLGHFVFKFHPGIMLGAVAGARSTTAALGALQEASKSNVPVVGYATGYAVSRLVMALLTIVVVNAF
>Mature_559_residues
MNYFVGTLQKYPEIALFLTIGIGFWIGNLKLGKFNLGVVTSTLLAGLLVGQIGIKLPAVMQSTFFAMFLFSVGYAVGPQF
IRALKSDGLPQVVFAILICLAGTVTAIVLGKLLGYNAALTAGLLSGGYTNSTVLGVAADLMNQSGLQPDELKAALALLPV
AYAVTYPFGTIGSAFMLANIAPKVLGFDLVKVCQDYEREHGGNKIGTTAYREFSARAVKLANTGLVGKTVEDVEKMFHNE
IFIRRMRTSAEGPIVDCKRDTVLTEGAILAVSGGLSALLAYADEFGPELKDVPLLDFSTELLDLVVTNKAYAGKTLGELI
HTLFGEPGRGVFLTKFTRSDVAMAMGEQVKVQRGDVLTILGAKADVAKIAKVLGYADRPVEGSDMAFMAFGIVFGSLIGA
FTIRIGGIPLSLGTAVGAIVAGIICGYLRSTMRTFGHIPGPAIWVFNNVGLNGFIACIGLNAALGFVGGIQNYGLTLFLA
GTLVTLVPIIVGLLLGHFVFKFHPGIMLGAVAGARSTTAALGALQEASKSNVPVVGYATGYAVSRLVMALLTIVVVNAF

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1787071, Length=550, Percent_Identity=31.4545454545455, Blast_Score=237, Evalue=1e-63,
Organism=Escherichia coli, GI87082315, Length=535, Percent_Identity=26.9158878504673, Blast_Score=137, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022457
- InterPro:   IPR006037
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 58658; Mature: 58658

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYFVGTLQKYPEIALFLTIGIGFWIGNLKLGKFNLGVVTSTLLAGLLVGQIGIKLPAVM
CCCCHHHHHHCCCCEEHHHHHHHHHCCCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHH
QSTFFAMFLFSVGYAVGPQFIRALKSDGLPQVVFAILICLAGTVTAIVLGKLLGYNAALT
HHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AGLLSGGYTNSTVLGVAADLMNQSGLQPDELKAALALLPVAYAVTYPFGTIGSAFMLANI
HHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
APKVLGFDLVKVCQDYEREHGGNKIGTTAYREFSARAVKLANTGLVGKTVEDVEKMFHNE
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHH
IFIRRMRTSAEGPIVDCKRDTVLTEGAILAVSGGLSALLAYADEFGPELKDVPLLDFSTE
HHHHHHHCCCCCCEEECCCCCEEECCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHH
LLDLVVTNKAYAGKTLGELIHTLFGEPGRGVFLTKFTRSDVAMAMGEQVKVQRGDVLTIL
HHHHHHCCCHHCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCCEEEECCCEEEEE
GAKADVAKIAKVLGYADRPVEGSDMAFMAFGIVFGSLIGAFTIRIGGIPLSLGTAVGAIV
CCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCEEHHHHHHHHHHH
AGIICGYLRSTMRTFGHIPGPAIWVFNNVGLNGFIACIGLNAALGFVGGIQNYGLTLFLA
HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHH
GTLVTLVPIIVGLLLGHFVFKFHPGIMLGAVAGARSTTAALGALQEASKSNVPVVGYATG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEHHH
YAVSRLVMALLTIVVVNAF
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNYFVGTLQKYPEIALFLTIGIGFWIGNLKLGKFNLGVVTSTLLAGLLVGQIGIKLPAVM
CCCCHHHHHHCCCCEEHHHHHHHHHCCCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHH
QSTFFAMFLFSVGYAVGPQFIRALKSDGLPQVVFAILICLAGTVTAIVLGKLLGYNAALT
HHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AGLLSGGYTNSTVLGVAADLMNQSGLQPDELKAALALLPVAYAVTYPFGTIGSAFMLANI
HHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
APKVLGFDLVKVCQDYEREHGGNKIGTTAYREFSARAVKLANTGLVGKTVEDVEKMFHNE
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHH
IFIRRMRTSAEGPIVDCKRDTVLTEGAILAVSGGLSALLAYADEFGPELKDVPLLDFSTE
HHHHHHHCCCCCCEEECCCCCEEECCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHH
LLDLVVTNKAYAGKTLGELIHTLFGEPGRGVFLTKFTRSDVAMAMGEQVKVQRGDVLTIL
HHHHHHCCCHHCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCCCEEEECCCEEEEE
GAKADVAKIAKVLGYADRPVEGSDMAFMAFGIVFGSLIGAFTIRIGGIPLSLGTAVGAIV
CCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCEEHHHHHHHHHHH
AGIICGYLRSTMRTFGHIPGPAIWVFNNVGLNGFIACIGLNAALGFVGGIQNYGLTLFLA
HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCHHHCCCHHHHH
GTLVTLVPIIVGLLLGHFVFKFHPGIMLGAVAGARSTTAALGALQEASKSNVPVVGYATG
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEHHH
YAVSRLVMALLTIVVVNAF
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]