Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is maeA1 [H]
Identifier: 154247860
GI number: 154247860
Start: 4359008
End: 4360660
Strand: Direct
Name: maeA1 [H]
Synonym: Xaut_3937
Alternate gene names: 154247860
Gene position: 4359008-4360660 (Clockwise)
Preceding gene: 154247859
Following gene: 154247861
Centisome position: 82.11
GC content: 64.19
Gene sequence:
>1653_bases ATGGCCACCAATAACCTCGCGAAGATCGAGAAGGCTCCAAAGAGCAACCTGTCCGGACTGAACCTGTTGCATGATCCGGT CCGCAACAAGGGCACGGCCTACACACGCGACGATCGCCGCCAGCTTGGCCTCGAGGGCCTGCTGCCCCACGCCGTCGAGA CCCTCGACCGCCAGGTGGAGCGCGTGCTCGACCATCTCGACCATGTGAAGGACGAACTCGACCAGTACAGTTACCTGATG GACCTGGAGGCCCGCAACGAGACGGTCTTCTACAAGGCCGTCATGTCTGACCCCAAGCGTTTCATCCCGATCCTCTACGA TCCCACCGTGGCGGATGCCTGCGAAGCCTTCGGAAACCTGTATCGTCGCCCCCGCGGCATGTATATCACCCGACACATGA AGGGGCGCATGGCCGAAGTGCTGCGCAACTGGCCCCAGAAGGACATCCGCTTCGTGTGCGTCTCCACCGGCGGCCGCATC CTCGGCCTCGGCGACATCGGCGCCAACGGCATGGGCATCCCGATCGGCAAGCTGCAGCTCTACACCGCCTGCGCCGCCGT GCCTCCCGACGTGCTGCTGCCGGTCCTGTTCGACATCGGGACCTCCAACGAGCACCTGCGCGCCGACCCCTTCTATCTCG GCACCCGCGAGGCGCCGGTGTCGGAAGCAGAACTCGACGAGCTGACTGAAGAATTCGTGCAGGCCGTTAACGAAGTCTTC CCCGGCTGCTGCGTGCACTTCGAGGACTGGAAGGGCACCGACGCCATCCGTATGCTTGATCGCTACAAGGACAAGATCCT CTGCTACAACGACGACATTCAGGGCACCGCCTCGGTGGCGCTCGCCGGCATTGCGGCGGCCATGAAGCAGACGGGCGGCA AGCTCAAGGACCAGCGCATCCTGTTCCTGGGTGCCGGTTCCGCAGGTCTCGGCATTTCCAAGCTGATCGCCGCCGAGCTG CAGACGCTGGGCCTCTCGGCTGAGGAAGCCCGCAAGCGCGTCCGCCTGTTCGACGTGAACGGCCTCATCGAATCCTCGCG CACGGACCTGACCGAAACCCAGAAGCTGTGGGCGCAGAACGAGAAGCCCACCAACAATTTCCTGGAGGTGATCGAGAGCT TCAAGCCCACTGTCCTGATCGGCGTCTCCACCAAGCCGCGCGCCTTCACCAAAGAGGTGATCGAGGCCATGAGCCGCCTC AACGACCGTCCGGTGATCTTCGCCCTGTCCAACCCGACCCACAAGGCCGAGTGCACCGCCGAGCAGGCCTATACCTGGTC GAAGGGGAAGGCGCTGTTCGCCGCCGGCGTCCAGTTCGATGAAGTGGCTTACGACGGCAAGACCTATCGGCCCGGCCAGG CCAACAACTTCTACATCTACCCGGCCATCGGCCTTGCCACCTACGCTGCCCGCCCCAAGCTGCTGAACGACGAATGCTTC ATCGTCGCCGCTCACGCCACGGCGGACCAGGTGGGTCCCTCGCTCCAGGCCAAGGGCATGCTGTTCCCGAGCCAGGAGCA CATCCTGGAAACCGAGGTCACCACCGCGACCCGCATCGTCGAATACATGTTCGATGCCGGCCTCGCGACCGTCGAGCGCC CGCGCGAGATCCGCTCCTGGGTCGAGAGCCTGCTCTACGCCCCGGCCTACTGA
Upstream 100 bases:
>100_bases TATGACTATCCGTCCCTGGCACGGCGCTTGCGAAGTTCTTTGCGTAGGCCAGATGGCGTTTTGCCTTCCGGCTCGACATT GCAAGCAAGGACAATCTAAA
Downstream 100 bases:
>100_bases GCCGCGCCCTCTCCTTCGGTCGAGACGGGACGAAAGCTACCCCGCTCAGGGTGTTGAAGCCTGAGCGGGGCGGGCGCTGG GCTGTCTTGGCCGGAACATC
Product: malate dehydrogenase
Products: NA
Alternate protein names: NAD-ME 1 [H]
Number of amino acids: Translated: 550; Mature: 549
Protein sequence:
>550_residues MATNNLAKIEKAPKSNLSGLNLLHDPVRNKGTAYTRDDRRQLGLEGLLPHAVETLDRQVERVLDHLDHVKDELDQYSYLM DLEARNETVFYKAVMSDPKRFIPILYDPTVADACEAFGNLYRRPRGMYITRHMKGRMAEVLRNWPQKDIRFVCVSTGGRI LGLGDIGANGMGIPIGKLQLYTACAAVPPDVLLPVLFDIGTSNEHLRADPFYLGTREAPVSEAELDELTEEFVQAVNEVF PGCCVHFEDWKGTDAIRMLDRYKDKILCYNDDIQGTASVALAGIAAAMKQTGGKLKDQRILFLGAGSAGLGISKLIAAEL QTLGLSAEEARKRVRLFDVNGLIESSRTDLTETQKLWAQNEKPTNNFLEVIESFKPTVLIGVSTKPRAFTKEVIEAMSRL NDRPVIFALSNPTHKAECTAEQAYTWSKGKALFAAGVQFDEVAYDGKTYRPGQANNFYIYPAIGLATYAARPKLLNDECF IVAAHATADQVGPSLQAKGMLFPSQEHILETEVTTATRIVEYMFDAGLATVERPREIRSWVESLLYAPAY
Sequences:
>Translated_550_residues MATNNLAKIEKAPKSNLSGLNLLHDPVRNKGTAYTRDDRRQLGLEGLLPHAVETLDRQVERVLDHLDHVKDELDQYSYLM DLEARNETVFYKAVMSDPKRFIPILYDPTVADACEAFGNLYRRPRGMYITRHMKGRMAEVLRNWPQKDIRFVCVSTGGRI LGLGDIGANGMGIPIGKLQLYTACAAVPPDVLLPVLFDIGTSNEHLRADPFYLGTREAPVSEAELDELTEEFVQAVNEVF PGCCVHFEDWKGTDAIRMLDRYKDKILCYNDDIQGTASVALAGIAAAMKQTGGKLKDQRILFLGAGSAGLGISKLIAAEL QTLGLSAEEARKRVRLFDVNGLIESSRTDLTETQKLWAQNEKPTNNFLEVIESFKPTVLIGVSTKPRAFTKEVIEAMSRL NDRPVIFALSNPTHKAECTAEQAYTWSKGKALFAAGVQFDEVAYDGKTYRPGQANNFYIYPAIGLATYAARPKLLNDECF IVAAHATADQVGPSLQAKGMLFPSQEHILETEVTTATRIVEYMFDAGLATVERPREIRSWVESLLYAPAY >Mature_549_residues ATNNLAKIEKAPKSNLSGLNLLHDPVRNKGTAYTRDDRRQLGLEGLLPHAVETLDRQVERVLDHLDHVKDELDQYSYLMD LEARNETVFYKAVMSDPKRFIPILYDPTVADACEAFGNLYRRPRGMYITRHMKGRMAEVLRNWPQKDIRFVCVSTGGRIL GLGDIGANGMGIPIGKLQLYTACAAVPPDVLLPVLFDIGTSNEHLRADPFYLGTREAPVSEAELDELTEEFVQAVNEVFP GCCVHFEDWKGTDAIRMLDRYKDKILCYNDDIQGTASVALAGIAAAMKQTGGKLKDQRILFLGAGSAGLGISKLIAAELQ TLGLSAEEARKRVRLFDVNGLIESSRTDLTETQKLWAQNEKPTNNFLEVIESFKPTVLIGVSTKPRAFTKEVIEAMSRLN DRPVIFALSNPTHKAECTAEQAYTWSKGKALFAAGVQFDEVAYDGKTYRPGQANNFYIYPAIGLATYAARPKLLNDECFI VAAHATADQVGPSLQAKGMLFPSQEHILETEVTTATRIVEYMFDAGLATVERPREIRSWVESLLYAPAY
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malic enzymes family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=535, Percent_Identity=42.4299065420561, Blast_Score=462, Evalue=1e-130, Organism=Homo sapiens, GI62420882, Length=535, Percent_Identity=41.6822429906542, Blast_Score=460, Evalue=1e-129, Organism=Homo sapiens, GI62420880, Length=535, Percent_Identity=41.6822429906542, Blast_Score=460, Evalue=1e-129, Organism=Homo sapiens, GI239049447, Length=535, Percent_Identity=41.6822429906542, Blast_Score=460, Evalue=1e-129, Organism=Homo sapiens, GI4505145, Length=516, Percent_Identity=41.2790697674419, Blast_Score=410, Evalue=1e-114, Organism=Homo sapiens, GI270265879, Length=449, Percent_Identity=43.4298440979955, Blast_Score=378, Evalue=1e-105, Organism=Escherichia coli, GI87081919, Length=500, Percent_Identity=39.4, Blast_Score=375, Evalue=1e-105, Organism=Escherichia coli, GI1788806, Length=342, Percent_Identity=25.7309941520468, Blast_Score=76, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17537199, Length=538, Percent_Identity=42.0074349442379, Blast_Score=422, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6322823, Length=568, Percent_Identity=34.8591549295775, Blast_Score=343, Evalue=5e-95, Organism=Drosophila melanogaster, GI24646386, Length=536, Percent_Identity=42.3507462686567, Blast_Score=452, Evalue=1e-127, Organism=Drosophila melanogaster, GI24646388, Length=536, Percent_Identity=42.3507462686567, Blast_Score=452, Evalue=1e-127, Organism=Drosophila melanogaster, GI21356279, Length=540, Percent_Identity=40.3703703703704, Blast_Score=433, Evalue=1e-121, Organism=Drosophila melanogaster, GI281362672, Length=540, Percent_Identity=40.3703703703704, Blast_Score=433, Evalue=1e-121, Organism=Drosophila melanogaster, GI281362674, Length=540, Percent_Identity=40.3703703703704, Blast_Score=433, Evalue=1e-121, Organism=Drosophila melanogaster, GI281363505, Length=520, Percent_Identity=37.3076923076923, Blast_Score=403, Evalue=1e-112, Organism=Drosophila melanogaster, GI78707236, Length=520, Percent_Identity=37.3076923076923, Blast_Score=403, Evalue=1e-112, Organism=Drosophila melanogaster, GI281363503, Length=518, Percent_Identity=37.0656370656371, Blast_Score=399, Evalue=1e-111, Organism=Drosophila melanogaster, GI78707232, Length=500, Percent_Identity=37.6, Blast_Score=398, Evalue=1e-111, Organism=Drosophila melanogaster, GI78707242, Length=525, Percent_Identity=37.3333333333333, Blast_Score=397, Evalue=1e-110, Organism=Drosophila melanogaster, GI78707238, Length=525, Percent_Identity=37.3333333333333, Blast_Score=397, Evalue=1e-110, Organism=Drosophila melanogaster, GI78707240, Length=517, Percent_Identity=37.5241779497099, Blast_Score=392, Evalue=1e-109, Organism=Drosophila melanogaster, GI19922384, Length=538, Percent_Identity=32.8996282527881, Blast_Score=313, Evalue=1e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR001891 - InterPro: IPR016040 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M [H]
EC number: =1.1.1.38 [H]
Molecular weight: Translated: 61106; Mature: 60974
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATNNLAKIEKAPKSNLSGLNLLHDPVRNKGTAYTRDDRRQLGLEGLLPHAVETLDRQVE CCCCCHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCCHHCCCHHHHHHHHHHHH RVLDHLDHVKDELDQYSYLMDLEARNETVFYKAVMSDPKRFIPILYDPTVADACEAFGNL HHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEHHCCCCCEEEEEECCCHHHHHHHHHHH YRRPRGMYITRHMKGRMAEVLRNWPQKDIRFVCVSTGGRILGLGDIGANGMGIPIGKLQL HHCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCHHHHH YTACAAVPPDVLLPVLFDIGTSNEHLRADPFYLGTREAPVSEAELDELTEEFVQAVNEVF HHHHHCCCHHHHHHHHHHCCCCCCCEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHC PGCCVHFEDWKGTDAIRMLDRYKDKILCYNDDIQGTASVALAGIAAAMKQTGGKLKDQRI CCEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE LFLGAGSAGLGISKLIAAELQTLGLSAEEARKRVRLFDVNGLIESSRTDLTETQKLWAQN EEEECCCCCCCHHHHHHHHHHHHCCCHHHHHCCEEEEECCCHHHCCCCCHHHHHHHHHCC EKPTNNFLEVIESFKPTVLIGVSTKPRAFTKEVIEAMSRLNDRPVIFALSNPTHKAECTA CCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCH EQAYTWSKGKALFAAGVQFDEVAYDGKTYRPGQANNFYIYPAIGLATYAARPKLLNDECF HHCEEECCCCEEEEECCCHHHEECCCCCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCEE IVAAHATADQVGPSLQAKGMLFPSQEHILETEVTTATRIVEYMFDAGLATVERPREIRSW EEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHH VESLLYAPAY HHHHHCCCCC >Mature Secondary Structure ATNNLAKIEKAPKSNLSGLNLLHDPVRNKGTAYTRDDRRQLGLEGLLPHAVETLDRQVE CCCCHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHCCHHCCCHHHHHHHHHHHH RVLDHLDHVKDELDQYSYLMDLEARNETVFYKAVMSDPKRFIPILYDPTVADACEAFGNL HHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEHHCCCCCEEEEEECCCHHHHHHHHHHH YRRPRGMYITRHMKGRMAEVLRNWPQKDIRFVCVSTGGRILGLGDIGANGMGIPIGKLQL HHCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCHHHHH YTACAAVPPDVLLPVLFDIGTSNEHLRADPFYLGTREAPVSEAELDELTEEFVQAVNEVF HHHHHCCCHHHHHHHHHHCCCCCCCEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHC PGCCVHFEDWKGTDAIRMLDRYKDKILCYNDDIQGTASVALAGIAAAMKQTGGKLKDQRI CCEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEE LFLGAGSAGLGISKLIAAELQTLGLSAEEARKRVRLFDVNGLIESSRTDLTETQKLWAQN EEEECCCCCCCHHHHHHHHHHHHCCCHHHHHCCEEEEECCCHHHCCCCCHHHHHHHHHCC EKPTNNFLEVIESFKPTVLIGVSTKPRAFTKEVIEAMSRLNDRPVIFALSNPTHKAECTA CCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCH EQAYTWSKGKALFAAGVQFDEVAYDGKTYRPGQANNFYIYPAIGLATYAARPKLLNDECF HHCEEECCCCEEEEECCCHHHEECCCCCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCEE IVAAHATADQVGPSLQAKGMLFPSQEHILETEVTTATRIVEYMFDAGLATVERPREIRSW EEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHH VESLLYAPAY HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA