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The map label for this gene is ypfH [C]

Identifier: 154247765

GI number: 154247765

Start: 4259135

End: 4259845

Strand: Direct

Name: ypfH [C]

Synonym: Xaut_3842

Alternate gene names: 154247765

Gene position: 4259135-4259845 (Clockwise)

Preceding gene: 154247764

Following gene: 154247766

Centisome position: 80.23

GC content: 71.31

Gene sequence:

>711_bases
ATGACTTTTCCCAGCGGCTCCTTTCCCCTTGATGGCGTGTCCCTCGACGAGCCGGTGCTCGATGGCCCGCGCCTGCGCCC
CCGCAACGGCGGCGCGCCGGATTGCCTCGTGGTGCTGCTGCACGGCTATGGTGCGGACGGCCGTGACCTCATCGACATCG
GCAATGCCTGGGCGGACCTTCTGCCCGGCGCCATGTTCGTCTCGCCGCACGCGCCCGATCCCTGCGCGGGGGCGCCGGTG
GGCCGCCAGTGGTTTCCGCTCACCTTCCGCGATCCCCATGAACTGACCCTCGGCGCCGAAGGCGCCGCGCCCCTGCTGCG
GGACTTCCTCGCCGAGGAACTGGCCAAATACGATCTGCCGCCCTCACGCCTCGCTCTGGTGGGCTTCAGCCAGGGGGCGA
TGATGGCGCTGAAGCTCGGCACCACGGCGCAGGAGGCCCCTGCGGCGGTGGTGGCCTATTCCGGCATGTGGGTGGATGCC
GGGCGCGGGGATATCCAGCTGTCGGCACGTCCCCCGGTCCTGCTGGTGCACGGCAGCGAGGACGAGGTGATTCCCGCCCA
GGCCCTGTTCGCCTCGGCGCAGGGGCTGTCGGCGGCCGGCGTGCCGGTGGAATGGCATCTGAGCCAGGGCCTCGGCCACG
GCATCGACGACGAGGGGCTGTTCCACGGCGGGCGGTTCCTCGCCGAGTTCCTGGGCAAGGCGCGCCGCTGA

Upstream 100 bases:

>100_bases
TCTGCTGTGGGCGTATTATGGTGCGCGGCGCACCCGTCAGGGCGCGCCGGCCTGAGCGTTTCGAAGCCCACTCATTTGAA
GCCCACCCATTGGTAATGCC

Downstream 100 bases:

>100_bases
GCATCAGCCCGCGCGCCATTTGAGCGTAACCCGCTTGGAATCAGCCCGCGCGGCATTTGAGCGTAACCCGCTTGGAATCG
GTCGAAGACCGAGGCTGACG

Product: phospholipase/carboxylesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTFPSGSFPLDGVSLDEPVLDGPRLRPRNGGAPDCLVVLLHGYGADGRDLIDIGNAWADLLPGAMFVSPHAPDPCAGAPV
GRQWFPLTFRDPHELTLGAEGAAPLLRDFLAEELAKYDLPPSRLALVGFSQGAMMALKLGTTAQEAPAAVVAYSGMWVDA
GRGDIQLSARPPVLLVHGSEDEVIPAQALFASAQGLSAAGVPVEWHLSQGLGHGIDDEGLFHGGRFLAEFLGKARR

Sequences:

>Translated_236_residues
MTFPSGSFPLDGVSLDEPVLDGPRLRPRNGGAPDCLVVLLHGYGADGRDLIDIGNAWADLLPGAMFVSPHAPDPCAGAPV
GRQWFPLTFRDPHELTLGAEGAAPLLRDFLAEELAKYDLPPSRLALVGFSQGAMMALKLGTTAQEAPAAVVAYSGMWVDA
GRGDIQLSARPPVLLVHGSEDEVIPAQALFASAQGLSAAGVPVEWHLSQGLGHGIDDEGLFHGGRFLAEFLGKARR
>Mature_235_residues
TFPSGSFPLDGVSLDEPVLDGPRLRPRNGGAPDCLVVLLHGYGADGRDLIDIGNAWADLLPGAMFVSPHAPDPCAGAPVG
RQWFPLTFRDPHELTLGAEGAAPLLRDFLAEELAKYDLPPSRLALVGFSQGAMMALKLGTTAQEAPAAVVAYSGMWVDAG
RGDIQLSARPPVLLVHGSEDEVIPAQALFASAQGLSAAGVPVEWHLSQGLGHGIDDEGLFHGGRFLAEFLGKARR

Specific function: Unknown

COG id: COG0400

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase 2 family [H]

Homologues:

Organism=Escherichia coli, GI87082111, Length=185, Percent_Identity=29.1891891891892, Blast_Score=73, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17508057, Length=217, Percent_Identity=26.2672811059908, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003140 [H]

Pfam domain/function: PF02230 Abhydrolase_2 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 24789; Mature: 24658

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFPSGSFPLDGVSLDEPVLDGPRLRPRNGGAPDCLVVLLHGYGADGRDLIDIGNAWADL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEHHHHHHHH
LPGAMFVSPHAPDPCAGAPVGRQWFPLTFRDPHELTLGAEGAAPLLRDFLAEELAKYDLP
CCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCC
PSRLALVGFSQGAMMALKLGTTAQEAPAAVVAYSGMWVDAGRGDIQLSARPPVLLVHGSE
HHHEEEEEECCCCEEEEEECCCCCCCCEEEEEECCEEEECCCCEEEECCCCCEEEEECCC
DEVIPAQALFASAQGLSAAGVPVEWHLSQGLGHGIDDEGLFHGGRFLAEFLGKARR
CCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TFPSGSFPLDGVSLDEPVLDGPRLRPRNGGAPDCLVVLLHGYGADGRDLIDIGNAWADL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEHHHHHHHH
LPGAMFVSPHAPDPCAGAPVGRQWFPLTFRDPHELTLGAEGAAPLLRDFLAEELAKYDLP
CCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCC
PSRLALVGFSQGAMMALKLGTTAQEAPAAVVAYSGMWVDAGRGDIQLSARPPVLLVHGSE
HHHEEEEEECCCCEEEEEECCCCCCCCEEEEEECCEEEECCCCEEEECCCCCEEEEECCC
DEVIPAQALFASAQGLSAAGVPVEWHLSQGLGHGIDDEGLFHGGRFLAEFLGKARR
CCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA