Click here to switch to the map view.

The map label for this gene is 154247766

Identifier: 154247766

GI number: 154247766

Start: 4260056

End: 4260646

Strand: Direct

Name: 154247766

Synonym: Xaut_3843

Alternate gene names: NA

Gene position: 4260056-4260646 (Clockwise)

Preceding gene: 154247765

Following gene: 154247768

Centisome position: 80.24

GC content: 62.94

Gene sequence:

>591_bases
ATGATTCGGCTGCGCAGACGAGGAGTTCGGTCCTTGACCACTGCTTTGTCACCAGGTGCCTGGCCAGCGCTCGTGCTCAA
CGCGGACTATCGCCCGTTGAGCTACTACCCGCTGTCGGTCTGGAGCTGGCAGGACGCCATCAAGGCGGTGTTCCTCGATC
GCGTGAATATCGTCGAATATTACGACAAGGCGGTGCGAAGTCCGGGCTTCGAGATCCGCCTGCCCAGCGTGGTCTCGCTC
CGTACTTTCGTGAAGCCCACGCGGCAACCGGCCTTCACCCGCTTCAACGTCTTCCTGCGCGATCGCTTCTCCTGCCAATA
TTGCGGCTCGCGCGAGGACCTGACATTCGATCACCTGATCCCGCGCTCCCGGGGCGGGCAGACCACCTGGGAAAACGTCG
TCGCCGCCTGCTCCCCCTGCAACCTGCGCAAGGGCAGCCATATGCCGGGCGACCTGGGAATGTGGCCGGCGCAGATGCCC
TACCAGCCGTCCGTGCACGACCTGCACCAGAACGGCCGCCACTTCCCGCCCAACTACCTGCATGAAAGCTGGATGGACTA
TCTGTACTGGGATACCGAGCTGGATCCCTGA

Upstream 100 bases:

>100_bases
TCAGGCTCTATCCAACAGCATCCGGGCGTGGTTTGGCCGCGGCTTCACAAGGATGACACGGAGCATATAGAGTATCGCCC
GCGCATCAGGATCGTCAGCG

Downstream 100 bases:

>100_bases
GAGCGGCGTGACATCCTTACGTCAGGCTTTGCGACGGGTTGTCGCGCCGCCAAAGGCCACCACGGCCAGTCCAGCCGCGA
TCAACGCATTCCATCCCGCC

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain Protein; Restriction Endonuclease; HNH Endonuclease Domain-Containing Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MIRLRRRGVRSLTTALSPGAWPALVLNADYRPLSYYPLSVWSWQDAIKAVFLDRVNIVEYYDKAVRSPGFEIRLPSVVSL
RTFVKPTRQPAFTRFNVFLRDRFSCQYCGSREDLTFDHLIPRSRGGQTTWENVVAACSPCNLRKGSHMPGDLGMWPAQMP
YQPSVHDLHQNGRHFPPNYLHESWMDYLYWDTELDP

Sequences:

>Translated_196_residues
MIRLRRRGVRSLTTALSPGAWPALVLNADYRPLSYYPLSVWSWQDAIKAVFLDRVNIVEYYDKAVRSPGFEIRLPSVVSL
RTFVKPTRQPAFTRFNVFLRDRFSCQYCGSREDLTFDHLIPRSRGGQTTWENVVAACSPCNLRKGSHMPGDLGMWPAQMP
YQPSVHDLHQNGRHFPPNYLHESWMDYLYWDTELDP
>Mature_196_residues
MIRLRRRGVRSLTTALSPGAWPALVLNADYRPLSYYPLSVWSWQDAIKAVFLDRVNIVEYYDKAVRSPGFEIRLPSVVSL
RTFVKPTRQPAFTRFNVFLRDRFSCQYCGSREDLTFDHLIPRSRGGQTTWENVVAACSPCNLRKGSHMPGDLGMWPAQMP
YQPSVHDLHQNGRHFPPNYLHESWMDYLYWDTELDP

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22824; Mature: 22824

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLRRRGVRSLTTALSPGAWPALVLNADYRPLSYYPLSVWSWQDAIKAVFLDRVNIVEY
CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHH
YDKAVRSPGFEIRLPSVVSLRTFVKPTRQPAFTRFNVFLRDRFSCQYCGSREDLTFDHLI
HHHHHCCCCCEEECCHHHHHHHHHCCCCCCCHHHEEEEECCCCCEEECCCCCCCCHHHHC
PRSRGGQTTWENVVAACSPCNLRKGSHMPGDLGMWPAQMPYQPSVHDLHQNGRHFPPNYL
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHH
HESWMDYLYWDTELDP
HHHHHHHEECCCCCCC
>Mature Secondary Structure
MIRLRRRGVRSLTTALSPGAWPALVLNADYRPLSYYPLSVWSWQDAIKAVFLDRVNIVEY
CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHH
YDKAVRSPGFEIRLPSVVSLRTFVKPTRQPAFTRFNVFLRDRFSCQYCGSREDLTFDHLI
HHHHHCCCCCEEECCHHHHHHHHHCCCCCCCHHHEEEEECCCCCEEECCCCCCCCHHHHC
PRSRGGQTTWENVVAACSPCNLRKGSHMPGDLGMWPAQMPYQPSVHDLHQNGRHFPPNYL
CCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHH
HESWMDYLYWDTELDP
HHHHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA