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The map label for this gene is bexD [H]

Identifier: 154247705

GI number: 154247705

Start: 4188417

End: 4189607

Strand: Direct

Name: bexD [H]

Synonym: Xaut_3781

Alternate gene names: 154247705

Gene position: 4188417-4189607 (Clockwise)

Preceding gene: 154247704

Following gene: 154247706

Centisome position: 78.89

GC content: 64.9

Gene sequence:

>1191_bases
GTGTTGCTCGTCCGAAAGAGTTGGTTCGACCGCCTACGTTTCGCAGGCTGCGTCGCCATCGCTGCAGTCCTGGGCGGCTG
CAATTTTCTTCCGGCTTCCGGCCCCTACAGCACAGAAGTGCGCAACCCGCAGTCTCAGGACACGGACGGCGTCGGCTACA
AGCTGGTGCCCATGACGATTGACGTGGTGCGGGTGCTGGCCACCACTGACAGCGAGGGGCTGATCGGCACCTTCCGCAAC
GACCGCAGGCCCATCCCCAACGTCAAGATCGGCGTGGGCGACGTGGTGGGCGTGTCCATCTTCGAGGCGTCCTCGGGCGG
CCTGTTCATTCCGGCGGAAGCGGCTTCGCGCGCCGGCAACTTCGTCGACATCCCCGACCAGTCGGTCGATCCCAACGGCT
TCATCTCGGTGCCCTATGCCGGCCAGATCAAGGCCGCGGGCTTTTCGCCGTCGCAGGTGGAGAAGGAAATCGTCGATCGC
CTGCGCAACCGGGCCATCGAGCCCCAGGCCGTGGTGACGGTGAAGACCCAGCGGTCGAACGCCGTGACCGTGATCGGCGA
GGTGGAAACACCGCTGCGCTTCCCGCTGACCTCCGCCGGCGAGCGCATTCTCGACGCCGTCAGCCGCGGTGGCCTGGCCC
AGGCCAAGGGCTATGATCTGCTGGTGACCCTGCAGCGTGGCAATCGCGAGGCGACCATCAGCTTCAACCGCCTGGTCCGC
GAGCCCGCCAACAACATCTATCTGCAGCCCGATGACACCATCTACGTGTTCAGCCGTCCCCGCACCTTCCTGGCGTTCGG
CGCCACCGGAAAGCAGGGCCAGTTCAACTTCGGCAACGACTCCATCAGCCTGAGCGAGGCTGCCGCCAAGGCCGAGGGCC
TGCTCGATCAGCAGGCGGACCCGCAGTCGGTGTTCCTGTTCCGCATCGAGAACCGCACCACGCTGGAGCGCATGGGCGTG
GACGTGTCCAACATTCCGGACAAGCGGATCCCCACCATCTACACGGTCAATTTCCGCGAGCCCACCGGCTATCTGATGTC
CACCAAGGTCCCCATGCGCGACAAGGACATCATCTACATCGGCAATGCCGGATCGGTGGAGCTGACGAAGTTCCTCAACC
TGGTGCTGCTGGGGGCGACCACCGCCCGCGAGATCGCGGACGCCAACAACCTGGTCTCCACCGCAAACTGA

Upstream 100 bases:

>100_bases
AAACGCGCCGGCCCGCAGTCGATTCAGGCCGACAGAGATAGGCCGTTCCCGGCCCATCATGGTAGGGATCACACGCGACG
TTGTAAGGGGGTATTGGCCA

Downstream 100 bases:

>100_bases
GCCTGACCCCAAACGGGGGCACTCCGCTCCACGCCAAGGCCGCGCCCCCCGGGACGCGGCCTTTGTCGTTGTGAAGATGC
CGCGTGGAGGGGCGTCGGCT

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MLLVRKSWFDRLRFAGCVAIAAVLGGCNFLPASGPYSTEVRNPQSQDTDGVGYKLVPMTIDVVRVLATTDSEGLIGTFRN
DRRPIPNVKIGVGDVVGVSIFEASSGGLFIPAEAASRAGNFVDIPDQSVDPNGFISVPYAGQIKAAGFSPSQVEKEIVDR
LRNRAIEPQAVVTVKTQRSNAVTVIGEVETPLRFPLTSAGERILDAVSRGGLAQAKGYDLLVTLQRGNREATISFNRLVR
EPANNIYLQPDDTIYVFSRPRTFLAFGATGKQGQFNFGNDSISLSEAAAKAEGLLDQQADPQSVFLFRIENRTTLERMGV
DVSNIPDKRIPTIYTVNFREPTGYLMSTKVPMRDKDIIYIGNAGSVELTKFLNLVLLGATTAREIADANNLVSTAN

Sequences:

>Translated_396_residues
MLLVRKSWFDRLRFAGCVAIAAVLGGCNFLPASGPYSTEVRNPQSQDTDGVGYKLVPMTIDVVRVLATTDSEGLIGTFRN
DRRPIPNVKIGVGDVVGVSIFEASSGGLFIPAEAASRAGNFVDIPDQSVDPNGFISVPYAGQIKAAGFSPSQVEKEIVDR
LRNRAIEPQAVVTVKTQRSNAVTVIGEVETPLRFPLTSAGERILDAVSRGGLAQAKGYDLLVTLQRGNREATISFNRLVR
EPANNIYLQPDDTIYVFSRPRTFLAFGATGKQGQFNFGNDSISLSEAAAKAEGLLDQQADPQSVFLFRIENRTTLERMGV
DVSNIPDKRIPTIYTVNFREPTGYLMSTKVPMRDKDIIYIGNAGSVELTKFLNLVLLGATTAREIADANNLVSTAN
>Mature_396_residues
MLLVRKSWFDRLRFAGCVAIAAVLGGCNFLPASGPYSTEVRNPQSQDTDGVGYKLVPMTIDVVRVLATTDSEGLIGTFRN
DRRPIPNVKIGVGDVVGVSIFEASSGGLFIPAEAASRAGNFVDIPDQSVDPNGFISVPYAGQIKAAGFSPSQVEKEIVDR
LRNRAIEPQAVVTVKTQRSNAVTVIGEVETPLRFPLTSAGERILDAVSRGGLAQAKGYDLLVTLQRGNREATISFNRLVR
EPANNIYLQPDDTIYVFSRPRTFLAFGATGKQGQFNFGNDSISLSEAAAKAEGLLDQQADPQSVFLFRIENRTTLERMGV
DVSNIPDKRIPTIYTVNFREPTGYLMSTKVPMRDKDIIYIGNAGSVELTKFLNLVLLGATTAREIADANNLVSTAN

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the BexA, BexB and BexC proteins. May function as a membrane anchor for capsular polysaccharides. Possible porin properties [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=315, Percent_Identity=26.031746031746, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1788376, Length=401, Percent_Identity=24.1895261845387, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715 [H]

Pfam domain/function: PF02563 Poly_export [H]

EC number: NA

Molecular weight: Translated: 42909; Mature: 42909

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLVRKSWFDRLRFAGCVAIAAVLGGCNFLPASGPYSTEVRNPQSQDTDGVGYKLVPMTI
CEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHE
DVVRVLATTDSEGLIGTFRNDRRPIPNVKIGVGDVVGVSIFEASSGGLFIPAEAASRAGN
EEEEEEEECCCCCCEEECCCCCCCCCCEEECCCCEEEEEEEEECCCCEEEECHHHHHCCC
FVDIPDQSVDPNGFISVPYAGQIKAAGFSPSQVEKEIVDRLRNRAIEPQAVVTVKTQRSN
EEECCCCCCCCCCEEECCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
AVTVIGEVETPLRFPLTSAGERILDAVSRGGLAQAKGYDLLVTLQRGNREATISFNRLVR
EEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEHHHHHH
EPANNIYLQPDDTIYVFSRPRTFLAFGATGKQGQFNFGNDSISLSEAAAKAEGLLDQQAD
CCCCCEEECCCCEEEEEECCCEEEEECCCCCCCCEECCCCCEEHHHHHHHHHHHHCCCCC
PQSVFLFRIENRTTLERMGVDVSNIPDKRIPTIYTVNFREPTGYLMSTKVPMRDKDIIYI
CCEEEEEEECCCCCHHHHCCCHHCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCEEEE
GNAGSVELTKFLNLVLLGATTAREIADANNLVSTAN
CCCCCEEHHHHHHEEEECCCHHHHHHCCCCEEECCC
>Mature Secondary Structure
MLLVRKSWFDRLRFAGCVAIAAVLGGCNFLPASGPYSTEVRNPQSQDTDGVGYKLVPMTI
CEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHE
DVVRVLATTDSEGLIGTFRNDRRPIPNVKIGVGDVVGVSIFEASSGGLFIPAEAASRAGN
EEEEEEEECCCCCCEEECCCCCCCCCCEEECCCCEEEEEEEEECCCCEEEECHHHHHCCC
FVDIPDQSVDPNGFISVPYAGQIKAAGFSPSQVEKEIVDRLRNRAIEPQAVVTVKTQRSN
EEECCCCCCCCCCEEECCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
AVTVIGEVETPLRFPLTSAGERILDAVSRGGLAQAKGYDLLVTLQRGNREATISFNRLVR
EEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEHHHHHH
EPANNIYLQPDDTIYVFSRPRTFLAFGATGKQGQFNFGNDSISLSEAAAKAEGLLDQQAD
CCCCCEEECCCCEEEEEECCCEEEEECCCCCCCCEECCCCCEEHHHHHHHHHHHHCCCCC
PQSVFLFRIENRTTLERMGVDVSNIPDKRIPTIYTVNFREPTGYLMSTKVPMRDKDIIYI
CCEEEEEEECCCCCHHHHCCCHHCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCCEEEE
GNAGSVELTKFLNLVLLGATTAREIADANNLVSTAN
CCCCCEEHHHHHHEEEECCCHHHHHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2082145 [H]