Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154247706
Identifier: 154247706
GI number: 154247706
Start: 4189807
End: 4190979
Strand: Direct
Name: 154247706
Synonym: Xaut_3782
Alternate gene names: NA
Gene position: 4189807-4190979 (Clockwise)
Preceding gene: 154247705
Following gene: 154247707
Centisome position: 78.92
GC content: 65.13
Gene sequence:
>1173_bases ATGTTCATCGCCTTCTTCGAGGCGCTCAAGGCTGGCGGCGTGCCGGTCTCCGTGCGTGAATATCTCACGCTGATGGAGGC CATGGACCGCGACGTGGCCGGCCGGCAGGTGGATGCCTTCTACTATCTCGCCCGCGCCAGCCTGGTGAAGGACGAGCGCC ACCTCGACCGCTTCGACCAGGTCTTCGGCCGCTGCTTCAAGGGTCTCGAAGGGGCGCTCGGCGAAGAGGGCCACTCCATC CCCGAGGATTGGCTGAGGAAGCTGACCGAGAAGCACCTCACCGAGGAGGAGAAGGCCCAGATCGAGGCCCTGGGCGGCCT CGACAAGCTGCTGGAGACGTTGAAGAAGCGGCTGGAGGAGCAAAAGGGGCGCCACCAGGGCGGCTCGAAATGGATCGGCA CCGGCGGCACGTCACCCTTCGGCGCCTATGGCTACAATCCCGAAGGCGTGCGCATCGGCCAGGACGGCAACCGCAACTTC CGCGCCGTGAAGGTCTGGGACAAGCGCGAGTTCAAGGACCTCGACGATACGGTTGAGCTGGGCACCCGCAACATCAAGGT GGCGCTGCGCCGGCTGCGCAAGTTCGCCCGCATCGGCGCGGCGGAGGAACTGGACCTCGACGGCACCATCCGCGAGACCG CCCGCCAGGGCTGGCTCGATGTGCGGCTGCGGCCGGAGCGGCGCAATGCGGTGAAGGTGCTGCTGTTCCTCGACGTGGGC GGCTCCATGGACTGGCACGTGGCCCAGGTGGAGGAACTGTTTTCCGCCGCCCGCGCCGAGTTCAAGCACCTCGAGCACTT CTACTTTCACAACTGCGTCTATGAGGGCGTGTGGAAATCCAACGCCCGGCGCGCCACCGAGCGCATCCCCCTGTTCGACG TGCTGCACACCTACCCGCACGACTACAAGCTGATCTTCGTGGGCGATGCGTCCATGAGTCCGTATGAAATTACCTATGCC AATGGCTCGGTGGAGCACAACAATGCCGAGCCGGGCAAGGTCTGGCTGGAGCGCCTCACCACCACCTATCCCAAGGCGGC TTGGCTCAATCCGGTGCCCGAGCCCCATTGGGGCTATACGGAATCCATCCGTCTCATGCGCCACCTCATGGAGGGGCGGA TGTTCCCGCTCACCGTCGAGGGCATCGATGCGGCCATGCGGGAGCTGACGTGA
Upstream 100 bases:
>100_bases TTTGCGCGGGGCTGGCGCTCTCCGCTATGCTGGTGGACATCGCACGCGGCTAACCTGGCCGGCGGGCCGGTGCATGGCAC GGAGCGGGGAGAGAGCCTGG
Downstream 100 bases:
>100_bases GCGCGGATGCAGGAGGCGCCGCCTATGCCTGCTTTCCCCGCCTCGGCGGCGCCGGCGTGCGGCTCCAGCTCACGCCTCCG GTGCTGGAGTTCACAGTGGG
Product: VWA containing CoxE family protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Von Willebrand Factor Type A(VWA) Domain Protein; VWA Containing CoxE-Like Family Protein
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MFIAFFEALKAGGVPVSVREYLTLMEAMDRDVAGRQVDAFYYLARASLVKDERHLDRFDQVFGRCFKGLEGALGEEGHSI PEDWLRKLTEKHLTEEEKAQIEALGGLDKLLETLKKRLEEQKGRHQGGSKWIGTGGTSPFGAYGYNPEGVRIGQDGNRNF RAVKVWDKREFKDLDDTVELGTRNIKVALRRLRKFARIGAAEELDLDGTIRETARQGWLDVRLRPERRNAVKVLLFLDVG GSMDWHVAQVEELFSAARAEFKHLEHFYFHNCVYEGVWKSNARRATERIPLFDVLHTYPHDYKLIFVGDASMSPYEITYA NGSVEHNNAEPGKVWLERLTTTYPKAAWLNPVPEPHWGYTESIRLMRHLMEGRMFPLTVEGIDAAMRELT
Sequences:
>Translated_390_residues MFIAFFEALKAGGVPVSVREYLTLMEAMDRDVAGRQVDAFYYLARASLVKDERHLDRFDQVFGRCFKGLEGALGEEGHSI PEDWLRKLTEKHLTEEEKAQIEALGGLDKLLETLKKRLEEQKGRHQGGSKWIGTGGTSPFGAYGYNPEGVRIGQDGNRNF RAVKVWDKREFKDLDDTVELGTRNIKVALRRLRKFARIGAAEELDLDGTIRETARQGWLDVRLRPERRNAVKVLLFLDVG GSMDWHVAQVEELFSAARAEFKHLEHFYFHNCVYEGVWKSNARRATERIPLFDVLHTYPHDYKLIFVGDASMSPYEITYA NGSVEHNNAEPGKVWLERLTTTYPKAAWLNPVPEPHWGYTESIRLMRHLMEGRMFPLTVEGIDAAMRELT >Mature_390_residues MFIAFFEALKAGGVPVSVREYLTLMEAMDRDVAGRQVDAFYYLARASLVKDERHLDRFDQVFGRCFKGLEGALGEEGHSI PEDWLRKLTEKHLTEEEKAQIEALGGLDKLLETLKKRLEEQKGRHQGGSKWIGTGGTSPFGAYGYNPEGVRIGQDGNRNF RAVKVWDKREFKDLDDTVELGTRNIKVALRRLRKFARIGAAEELDLDGTIRETARQGWLDVRLRPERRNAVKVLLFLDVG GSMDWHVAQVEELFSAARAEFKHLEHFYFHNCVYEGVWKSNARRATERIPLFDVLHTYPHDYKLIFVGDASMSPYEITYA NGSVEHNNAEPGKVWLERLTTTYPKAAWLNPVPEPHWGYTESIRLMRHLMEGRMFPLTVEGIDAAMRELT
Specific function: Unknown
COG id: COG3825
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44745; Mature: 44745
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIAFFEALKAGGVPVSVREYLTLMEAMDRDVAGRQVDAFYYLARASLVKDERHLDRFDQ CCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VFGRCFKGLEGALGEEGHSIPEDWLRKLTEKHLTEEEKAQIEALGGLDKLLETLKKRLEE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHH QKGRHQGGSKWIGTGGTSPFGAYGYNPEGVRIGQDGNRNFRAVKVWDKREFKDLDDTVEL HHCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCHHHHCCHHHHHH GTRNIKVALRRLRKFARIGAAEELDLDGTIRETARQGWLDVRLRPERRNAVKVLLFLDVG CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCEEEEEEEEECC GSMDWHVAQVEELFSAARAEFKHLEHFYFHNCVYEGVWKSNARRATERIPLFDVLHTYPH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCC DYKLIFVGDASMSPYEITYANGSVEHNNAEPGKVWLERLTTTYPKAAWLNPVPEPHWGYT CEEEEEEECCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCHH ESIRLMRHLMEGRMFPLTVEGIDAAMRELT HHHHHHHHHHCCCCCEEEHHHHHHHHHHCC >Mature Secondary Structure MFIAFFEALKAGGVPVSVREYLTLMEAMDRDVAGRQVDAFYYLARASLVKDERHLDRFDQ CCHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH VFGRCFKGLEGALGEEGHSIPEDWLRKLTEKHLTEEEKAQIEALGGLDKLLETLKKRLEE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHH QKGRHQGGSKWIGTGGTSPFGAYGYNPEGVRIGQDGNRNFRAVKVWDKREFKDLDDTVEL HHCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCHHHHCCHHHHHH GTRNIKVALRRLRKFARIGAAEELDLDGTIRETARQGWLDVRLRPERRNAVKVLLFLDVG CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCEEEEEEEEECC GSMDWHVAQVEELFSAARAEFKHLEHFYFHNCVYEGVWKSNARRATERIPLFDVLHTYPH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCC DYKLIFVGDASMSPYEITYANGSVEHNNAEPGKVWLERLTTTYPKAAWLNPVPEPHWGYT CEEEEEEECCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCCCHH ESIRLMRHLMEGRMFPLTVEGIDAAMRELT HHHHHHHHHHCCCCCEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA