Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is prpE [H]
Identifier: 154247704
GI number: 154247704
Start: 4187431
End: 4188186
Strand: Direct
Name: prpE [H]
Synonym: Xaut_3780
Alternate gene names: 154247704
Gene position: 4187431-4188186 (Clockwise)
Preceding gene: 154247702
Following gene: 154247705
Centisome position: 78.88
GC content: 63.62
Gene sequence:
>756_bases ATGGCAATGCTGAAGCTCCGCCCCAATCCTTTGGCTGAAGCCGCGTTCGCCCCGCCGGTGCCGCGCCTTCCGCCGAACAA GCGGGTCTATGCCGTCGGGGACATCCACGGTCACCTCGATCTGCTCAAGCGGCTGCAGGCGGCGATCGACGAGGACATGC TCGTGCATCCGGGCGTCGATTGCATCGAGGTCTATCTCGGCGACTATGTGGACCGCGGCCCGCAGTCGGCGGCGGTCATA GATGCGTTGATCGAACGTCAGGCCAGCCGCAAGGCGGTGTGCATCAGCGGCAACCACGAGGCGGTGATGATCGACGCCCT CCTGTCGCGGGAGACGTTTGCCCGCTGGCTGAAGATGGGCGGCCTGGAGACGGTCTTCTCTTATGTGGGTCACCGGCGCA ACCTGGACGAGAATACGCTCTGGAGCCTGTGGCGCGCAGCCGTGTCATCGGCGCATCTGGCGTTTCTGAAGCGACTGTCC AGCCATTTCGTCTGCGGCGACTATCTGTTCGTCCACGCGGGATTGCGCCCCGGCATCCCGCTGGAGGAGCAGAGCCGCGA GGACATGATGTGGATCCGGCGCGAATTCCTCGATTGTCCCGACTGGCTGGGCCATTGCGTCGTGCACGGCCACACTCCGA CCAAGGTGCCGGAGGTATTGCCCAACCGAATTAACATCGATACCGGGGCCTATGCCTCAGGGCATCTGACCTGTCTGGTG CTCGAAGGCGCCGACTGCTTCCATATCACGACCTGA
Upstream 100 bases:
>100_bases TGCAACAAAGGCTCTTCGCAGTGCGGGCGGGCGTGTGATAGACTTTTAGCCTGATCGTGCCCCACGGGGGTGCCGCAGTG GCAAAGGTCAAGCCCCGACC
Downstream 100 bases:
>100_bases TTCCCTGACTGTCTCCAGCGGCGCTGTGCGGAGCGATAGCCAGATACCTCAATTTTGGAGGTATTATTTTAACTTTTTCG CATGGAACCCCGCATCGGCA
Product: metallophosphoesterase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate asymmetrical hydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MAMLKLRPNPLAEAAFAPPVPRLPPNKRVYAVGDIHGHLDLLKRLQAAIDEDMLVHPGVDCIEVYLGDYVDRGPQSAAVI DALIERQASRKAVCISGNHEAVMIDALLSRETFARWLKMGGLETVFSYVGHRRNLDENTLWSLWRAAVSSAHLAFLKRLS SHFVCGDYLFVHAGLRPGIPLEEQSREDMMWIRREFLDCPDWLGHCVVHGHTPTKVPEVLPNRINIDTGAYASGHLTCLV LEGADCFHITT
Sequences:
>Translated_251_residues MAMLKLRPNPLAEAAFAPPVPRLPPNKRVYAVGDIHGHLDLLKRLQAAIDEDMLVHPGVDCIEVYLGDYVDRGPQSAAVI DALIERQASRKAVCISGNHEAVMIDALLSRETFARWLKMGGLETVFSYVGHRRNLDENTLWSLWRAAVSSAHLAFLKRLS SHFVCGDYLFVHAGLRPGIPLEEQSREDMMWIRREFLDCPDWLGHCVVHGHTPTKVPEVLPNRINIDTGAYASGHLTCLV LEGADCFHITT >Mature_250_residues AMLKLRPNPLAEAAFAPPVPRLPPNKRVYAVGDIHGHLDLLKRLQAAIDEDMLVHPGVDCIEVYLGDYVDRGPQSAAVID ALIERQASRKAVCISGNHEAVMIDALLSRETFARWLKMGGLETVFSYVGHRRNLDENTLWSLWRAAVSSAHLAFLKRLSS HFVCGDYLFVHAGLRPGIPLEEQSREDMMWIRREFLDCPDWLGHCVVHGHTPTKVPEVLPNRINIDTGAYASGHLTCLVL EGADCFHITT
Specific function: Asymmetrically hydrolyzes Ap4p to yield AMP and ATP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prpE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR006186 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.17 [H]
Molecular weight: Translated: 28021; Mature: 27889
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMLKLRPNPLAEAAFAPPVPRLPPNKRVYAVGDIHGHLDLLKRLQAAIDEDMLVHPGVD CCEEEECCCCHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEECCCHH CIEVYLGDYVDRGPQSAAVIDALIERQASRKAVCISGNHEAVMIDALLSRETFARWLKMG HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHC GLETVFSYVGHRRNLDENTLWSLWRAAVSSAHLAFLKRLSSHFVCGDYLFVHAGLRPGIP CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHEEECCCCCCCC LEEQSREDMMWIRREFLDCPDWLGHCVVHGHTPTKVPEVLPNRINIDTGAYASGHLTCLV CCCCCHHHHHHHHHHHCCCHHHHHHEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEE LEGADCFHITT EECCCEEEECC >Mature Secondary Structure AMLKLRPNPLAEAAFAPPVPRLPPNKRVYAVGDIHGHLDLLKRLQAAIDEDMLVHPGVD CEEEECCCCHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEECCCHH CIEVYLGDYVDRGPQSAAVIDALIERQASRKAVCISGNHEAVMIDALLSRETFARWLKMG HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHC GLETVFSYVGHRRNLDENTLWSLWRAAVSSAHLAFLKRLSSHFVCGDYLFVHAGLRPGIP CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEHHHHEEECCCCCCCC LEEQSREDMMWIRREFLDCPDWLGHCVVHGHTPTKVPEVLPNRINIDTGAYASGHLTCLV CCCCCHHHHHHHHHHHCCCHHHHHHEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEE LEGADCFHITT EECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA