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The map label for this gene is ygaE [C]

Identifier: 154246454

GI number: 154246454

Start: 2807540

End: 2808346

Strand: Reverse

Name: ygaE [C]

Synonym: Xaut_2513

Alternate gene names: 154246454

Gene position: 2808346-2807540 (Counterclockwise)

Preceding gene: 154246460

Following gene: 154246453

Centisome position: 52.9

GC content: 69.76

Gene sequence:

>807_bases
ATGAATTCCGGCAGCCCGACCGCCGCCCAGAAGGGCCTCAAGCACCGCACGCTCTCGGCGGCGATCCTCGACCAGTTGCG
CCAGTCGATCCTCGACGGCACCCATCCCGCCGGCACCCAGCTGCGGCAGGATGCGCTGGCGGATGCCTATGGCGTCAGCC
GCATCCCGGTGCGCGAGGCGCTGTTCCAGCTGGAGGCCGAGGGGCTGGTGCGCATGGTGCCGCAGAAGGGCGCCATCGTC
TCAGAGCTGTCGGTGGAGGAGATCAACGACGTGTTCGAGCTGAGGCGGATCATGGAGCCGCGCCTGCTGGAACGCGCCAT
CCCGCTGTTCACCGACGCGGACTTCACCAGGCTCGACGCCATCCACGCCCGCTTCACCGCCGCCACCAAGGCCCACGATG
TGAGCCAGTGGGGCATTCTCAACGCCGACTTCCACATGGCGCTCTATGACCGCGCGGCCCTGCCCCGCACCCGCCAGATC
GTCGCCGCCTTGCTGCAGACCTCGGACCGCTACACCCGGCTCCAGCTCTCCACCACGGAAGCCATGGACCGGGCCAAGAG
CGAGCACGCCCAGCTCATCGCTTTGTGCCGGGCCGGCGCGGTGGCGGAGGCCACCTCCTTCCTCGACGGTCATATCGGCA
AGGTGCACGCCGACCTGCTGCGGGTGATCGAGCAGCGGGCGGCCCGCGCCAAGGCGGCAGATGGGCTACGGCAAGGCGCG
GGCGAGACGACGACGCAAGAGGCCGGCGCGGACACCCGGCGCGGGACACGGTCCAAGTCCTTGGCAAAGGGCGAGGACCT
GCGCTAG

Upstream 100 bases:

>100_bases
CCTTGTGGGCCTCGATTTGGTGCTTTCAATCTGAATGTAGATTTTATACAATCGACACGTCAATACCCCGCCAACGATTT
TTAATGTAGCTCTGAACCTC

Downstream 100 bases:

>100_bases
AGCACGCGCCGGTCAGCCTGCCTTGCCGGGCTGATCGCAGAACGCGTGCTCTTGTCCGATACTGAGAGCCGAGACCCGTC
CGTTCCGGAGACTTCATGGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; GntR-Family Transcriptional Regulator; Transcriptional Regulator GntR Family Protein; Transcriptional Regulator Gntr Family; GntR Family Regulatory Protein; GntR Domain-Containing Protein; Transcription Regulator; Regulatory Protein GntR HTH; Mn-Dependent Transcriptional Regulator; Transcriptional Regulator GntR; GntR Family Regulatory; Regulatory Protein GntR; Transcriptional Regulator Protein GntR Family; GntR Family Transcription Regulator; Transcription Regulator Protein; FCD Domain Protein; Transcriptional Regulator Protein; Regulator PutR For Proline Utilization GntR Family; Transcription Regulator AsnC; Glycosyltransferase

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MNSGSPTAAQKGLKHRTLSAAILDQLRQSILDGTHPAGTQLRQDALADAYGVSRIPVREALFQLEAEGLVRMVPQKGAIV
SELSVEEINDVFELRRIMEPRLLERAIPLFTDADFTRLDAIHARFTAATKAHDVSQWGILNADFHMALYDRAALPRTRQI
VAALLQTSDRYTRLQLSTTEAMDRAKSEHAQLIALCRAGAVAEATSFLDGHIGKVHADLLRVIEQRAARAKAADGLRQGA
GETTTQEAGADTRRGTRSKSLAKGEDLR

Sequences:

>Translated_268_residues
MNSGSPTAAQKGLKHRTLSAAILDQLRQSILDGTHPAGTQLRQDALADAYGVSRIPVREALFQLEAEGLVRMVPQKGAIV
SELSVEEINDVFELRRIMEPRLLERAIPLFTDADFTRLDAIHARFTAATKAHDVSQWGILNADFHMALYDRAALPRTRQI
VAALLQTSDRYTRLQLSTTEAMDRAKSEHAQLIALCRAGAVAEATSFLDGHIGKVHADLLRVIEQRAARAKAADGLRQGA
GETTTQEAGADTRRGTRSKSLAKGEDLR
>Mature_268_residues
MNSGSPTAAQKGLKHRTLSAAILDQLRQSILDGTHPAGTQLRQDALADAYGVSRIPVREALFQLEAEGLVRMVPQKGAIV
SELSVEEINDVFELRRIMEPRLLERAIPLFTDADFTRLDAIHARFTAATKAHDVSQWGILNADFHMALYDRAALPRTRQI
VAALLQTSDRYTRLQLSTTEAMDRAKSEHAQLIALCRAGAVAEATSFLDGHIGKVHADLLRVIEQRAARAKAADGLRQGA
GETTTQEAGADTRRGTRSKSLAKGEDLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29297; Mature: 29297

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSGSPTAAQKGLKHRTLSAAILDQLRQSILDGTHPAGTQLRQDALADAYGVSRIPVREA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHH
LFQLEAEGLVRMVPQKGAIVSELSVEEINDVFELRRIMEPRLLERAIPLFTDADFTRLDA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHH
IHARFTAATKAHDVSQWGILNADFHMALYDRAALPRTRQIVAALLQTSDRYTRLQLSTTE
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEHHHH
AMDRAKSEHAQLIALCRAGAVAEATSFLDGHIGKVHADLLRVIEQRAARAKAADGLRQGA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GETTTQEAGADTRRGTRSKSLAKGEDLR
CCCCHHHCCCCHHCCCCHHHCCCCCCCC
>Mature Secondary Structure
MNSGSPTAAQKGLKHRTLSAAILDQLRQSILDGTHPAGTQLRQDALADAYGVSRIPVREA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHH
LFQLEAEGLVRMVPQKGAIVSELSVEEINDVFELRRIMEPRLLERAIPLFTDADFTRLDA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHH
IHARFTAATKAHDVSQWGILNADFHMALYDRAALPRTRQIVAALLQTSDRYTRLQLSTTE
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEHHHH
AMDRAKSEHAQLIALCRAGAVAEATSFLDGHIGKVHADLLRVIEQRAARAKAADGLRQGA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GETTTQEAGADTRRGTRSKSLAKGEDLR
CCCCHHHCCCCHHCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA