Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is ordL [H]
Identifier: 154246353
GI number: 154246353
Start: 2693203
End: 2694498
Strand: Direct
Name: ordL [H]
Synonym: Xaut_2412
Alternate gene names: 154246353
Gene position: 2693203-2694498 (Clockwise)
Preceding gene: 154246350
Following gene: 154246354
Centisome position: 50.73
GC content: 73.92
Gene sequence:
>1296_bases ATGCCGATCGCTCCGCGTTCCCATGGCCTGTGGCAGGCCACGGCTCCGCCGGCGCCGGCGCTGGCGCCGCTCTCGGGTGC GCTTCGGGCCGACGTGGCCGTGGTGGGGGCGGGATATGCCGGCCTGTCGGCGGCGCTGCGCCTCGCCGAGGCGGGCGCGC GGGTGACCGTGCTGGAGGCGGCGGAGGTGGGCTTCGGCGGGGCCGGGCGCAATGTGGGCCTCGTCAATGCTGGCCTGTGG GTGATGCCGGATGTCATCCGCGCCGCCCTGGGTGAGGCGCGGGGCGAGGCGCTGATCGGCTTCCTCGGCGCAGCGCCGCA AGCAGTGTTCGACCTGGTGGCAAGGCATTCGATCCCCTGCGAGGTGGCGCCCGTGGGCACGTTGCATTGCGCAGTGGGCG CCGCCGGACGCGCCGAGATCGAGGCCCGCGCCGCGCAGTGGCAGGCCCGCGGCGCGCCGGTGCGGTTGCTGGAGGCTGGC GAGGCGCGCGACATGGTCGGCGGCGGCGACTTTACCGGCGCGCTGCTGGATCTGAGAGCCGGCACGATCCAGCCGCTGGC CTATGCACGGGGACTGGCGCGGGCAGCGCTTCAGGCCGGGGCGCAGATCTTCGTGTCGAGCCCGGTTGTCGGGGCCGAGG AGACCCCTGCCGGCTGGCGGCTGGCCACGCCGGGGGGAAGCCTTGAGGCCGACCATCTCATCGCCGCCACCGATGCCTAT GGCACCGGGCCGTTCGCCCCGCTGCGGCGCGAGCAGGTGCACCTGCCCTATTTCAATCTCGCGACCGCGCCGCTGCCGCC GGCGGTGCGGGCCACCATTCTCCCCGCCCGGCAGGGAGCATGGGACACCCGATCCATCCTCACCTCGTTCCGCATGGATG CGGCGGGGCGTCTGGTGTTCGGCAGTGTTGGCGCTCTCGACCGTGTCGGCGGCACCATCCACCGGGCCTATGCCCGCCGG GTTCTGGCGCGGCTTTATCCGCAGCTCGGCGGGATAGCCTCCGGGGTGGCCTTCGAGGCCGGCTGGCACGGCATGATCGG CATGACCGCCGACGCCCTGCCGCGTTTCCACCGGCTGGGGCGCTCCGGCGTCGCCGTGGCCGGCTACAACGGACGCGGCA TCGCGCCGGGAACAGTGTTCGGCGCCTTGCTGGCGGACCTCGTTCTCGGCCGGGTGCGGGAGGCGGATCTACCGCTGCCG CCAAGCGCGGTGGAGGCGGTCCGCTGGCGGACGGCACGGGAAGCCGTTTATGCCGCCGGCTCCGGTCTCGCCCACCTCGT CGCGGCGCGGCTCTAA
Upstream 100 bases:
>100_bases GCCATCGGATCGGCAAAGCCCGCTCTATCCTCCATTCTGAGAGGGAATCACCGGTCCGGGCCGATCGGGTCCGGCGCAGG CCCAGGGGAAAGGGTGCCCG
Downstream 100 bases:
>100_bases GACCCCGGCCGGGGGCGCCTTCGCCTTCACAACCGCGTTTTGCTGCCTTCCGCCAGGTCGGGAGGCGCTGGTGTTGCTCG ATCTTCTATTAATAACTCAG
Product: FAD dependent oxidoreductase
Products: glycine; formaldehyde; H2O2
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MPIAPRSHGLWQATAPPAPALAPLSGALRADVAVVGAGYAGLSAALRLAEAGARVTVLEAAEVGFGGAGRNVGLVNAGLW VMPDVIRAALGEARGEALIGFLGAAPQAVFDLVARHSIPCEVAPVGTLHCAVGAAGRAEIEARAAQWQARGAPVRLLEAG EARDMVGGGDFTGALLDLRAGTIQPLAYARGLARAALQAGAQIFVSSPVVGAEETPAGWRLATPGGSLEADHLIAATDAY GTGPFAPLRREQVHLPYFNLATAPLPPAVRATILPARQGAWDTRSILTSFRMDAAGRLVFGSVGALDRVGGTIHRAYARR VLARLYPQLGGIASGVAFEAGWHGMIGMTADALPRFHRLGRSGVAVAGYNGRGIAPGTVFGALLADLVLGRVREADLPLP PSAVEAVRWRTAREAVYAAGSGLAHLVAARL
Sequences:
>Translated_431_residues MPIAPRSHGLWQATAPPAPALAPLSGALRADVAVVGAGYAGLSAALRLAEAGARVTVLEAAEVGFGGAGRNVGLVNAGLW VMPDVIRAALGEARGEALIGFLGAAPQAVFDLVARHSIPCEVAPVGTLHCAVGAAGRAEIEARAAQWQARGAPVRLLEAG EARDMVGGGDFTGALLDLRAGTIQPLAYARGLARAALQAGAQIFVSSPVVGAEETPAGWRLATPGGSLEADHLIAATDAY GTGPFAPLRREQVHLPYFNLATAPLPPAVRATILPARQGAWDTRSILTSFRMDAAGRLVFGSVGALDRVGGTIHRAYARR VLARLYPQLGGIASGVAFEAGWHGMIGMTADALPRFHRLGRSGVAVAGYNGRGIAPGTVFGALLADLVLGRVREADLPLP PSAVEAVRWRTAREAVYAAGSGLAHLVAARL >Mature_430_residues PIAPRSHGLWQATAPPAPALAPLSGALRADVAVVGAGYAGLSAALRLAEAGARVTVLEAAEVGFGGAGRNVGLVNAGLWV MPDVIRAALGEARGEALIGFLGAAPQAVFDLVARHSIPCEVAPVGTLHCAVGAAGRAEIEARAAQWQARGAPVRLLEAGE ARDMVGGGDFTGALLDLRAGTIQPLAYARGLARAALQAGAQIFVSSPVVGAEETPAGWRLATPGGSLEADHLIAATDAYG TGPFAPLRREQVHLPYFNLATAPLPPAVRATILPARQGAWDTRSILTSFRMDAAGRLVFGSVGALDRVGGTIHRAYARRV LARLYPQLGGIASGVAFEAGWHGMIGMTADALPRFHRLGRSGVAVAGYNGRGIAPGTVFGALLADLVLGRVREADLPLPP SAVEAVRWRTAREAVYAAGSGLAHLVAARL
Specific function: Unknown
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=400, Percent_Identity=30, Blast_Score=149, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.5.3.1
Molecular weight: Translated: 44148; Mature: 44017
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIAPRSHGLWQATAPPAPALAPLSGALRADVAVVGAGYAGLSAALRLAEAGARVTVLEA CCCCCCCCCCEECCCCCCCCCCCCCHHHHHCEEEEECCHHHHHHHHHHHHCCCEEEEEEE AEVGFGGAGRNVGLVNAGLWVMPDVIRAALGEARGEALIGFLGAAPQAVFDLVARHSIPC HHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCC EVAPVGTLHCAVGAAGRAEIEARAAQWQARGAPVRLLEAGEARDMVGGGDFTGALLDLRA CCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCC GTIQPLAYARGLARAALQAGAQIFVSSPVVGAEETPAGWRLATPGGSLEADHLIAATDAY CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCC GTGPFAPLRREQVHLPYFNLATAPLPPAVRATILPARQGAWDTRSILTSFRMDAAGRLVF CCCCCCCCCCCEECCCEECCCCCCCCHHHHEEEECCCCCCCHHHHHHHHHHHCCCCEEEE GSVGALDRVGGTIHRAYARRVLARLYPQLGGIASGVAFEAGWHGMIGMTADALPRFHRLG ECCCCHHHHCHHHHHHHHHHHHHHHHHHHCCHHCCCEECCCCCCCCCCCHHHHHHHHHCC RSGVAVAGYNGRGIAPGTVFGALLADLVLGRVREADLPLPPSAVEAVRWRTAREAVYAAG CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC SGLAHLVAARL CCHHHHHHHCC >Mature Secondary Structure PIAPRSHGLWQATAPPAPALAPLSGALRADVAVVGAGYAGLSAALRLAEAGARVTVLEA CCCCCCCCCEECCCCCCCCCCCCCHHHHHCEEEEECCHHHHHHHHHHHHCCCEEEEEEE AEVGFGGAGRNVGLVNAGLWVMPDVIRAALGEARGEALIGFLGAAPQAVFDLVARHSIPC HHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCC EVAPVGTLHCAVGAAGRAEIEARAAQWQARGAPVRLLEAGEARDMVGGGDFTGALLDLRA CCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCC GTIQPLAYARGLARAALQAGAQIFVSSPVVGAEETPAGWRLATPGGSLEADHLIAATDAY CCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCC GTGPFAPLRREQVHLPYFNLATAPLPPAVRATILPARQGAWDTRSILTSFRMDAAGRLVF CCCCCCCCCCCEECCCEECCCCCCCCHHHHEEEECCCCCCCHHHHHHHHHHHCCCCEEEE GSVGALDRVGGTIHRAYARRVLARLYPQLGGIASGVAFEAGWHGMIGMTADALPRFHRLG ECCCCHHHHCHHHHHHHHHHHHHHHHHHHCCHHCCCEECCCCCCCCCCCHHHHHHHHHCC RSGVAVAGYNGRGIAPGTVFGALLADLVLGRVREADLPLPPSAVEAVRWRTAREAVYAAG CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC SGLAHLVAARL CCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: sarcosine; H2O; O2
Specific reaction: sarcosine + H2O + O2 = glycine + formaldehyde + H2O2
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]