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The map label for this gene is omp31 [H]

Identifier: 154246089

GI number: 154246089

Start: 2407847

End: 2408614

Strand: Direct

Name: omp31 [H]

Synonym: Xaut_2146

Alternate gene names: 154246089

Gene position: 2407847-2408614 (Clockwise)

Preceding gene: 154246088

Following gene: 154246098

Centisome position: 45.35

GC content: 64.06

Gene sequence:

>768_bases
ATGCGCAAGTCGCTGCTCGCTACCACCATTCTCGCGGCGATGGTCGCCGCCGGCGCCGCCCAGGCGGCGGACCTTGCCAC
CAAGATGCCAGTGAAGGCCGCGCCCGTCGCGCCCGCCTTCAGCTGGACCGGCTTCTACATCGGCGCGCAGGGCGGCTACG
CCTGGGCCGACAACAGCTTCAGCAACACCCACGACCTTTACAACACCTACGCGAACGACGCGAGCTACACGCTCGACGGC
GGCCTCGTCGGCGGCGTGATCGGCTATAACTACCAGATCAACAACATCGTGCTCGGCGTCGAGGCCGATGCCAACTGGGC
CGACATCTCCGGCTCGGGCTCCGTCCTGCGCGCCGGCGAGCTCGCCACGAACTGCATCGTGAGCAACAACCCCTGCTCGT
CCAAGATCGACGCGCTCGGCACCATCACCGCCCGCCTCGGCGTCGCCTTCGATCGTGTTCTGCTCTACGCCAAGGGCGGC
GCGGCTTGGGCCAACGTCAAGCACACCGCCGGTAGCACCGACTACGAATATCCGGAGTTCAGCTACAGCGCCTCCAACAG
CAACACCCGTTGGGGCTGGACCGTGGGCGCGGGCGTCGAATGGGCCTTCTTCAACAACTGGTCCGCGAAGGTCGAATACA
ATTACATCGACCTCGGCAGCAACGACGTGACCTTCAACTTCGTCCCCAATACCTATATGCCGGCTTATACCTCGACGGCC
GACACGACCGTCAATCTGGTGAAGGCCGGCATCAACTATCGCTTCTGA

Upstream 100 bases:

>100_bases
CAGTCCGGGCAGGGTCACCTGTTGCCGCTGGGAGACAGTCAGGGGGGCTGAACTGCGCTAAGACCCCCTCATCCTGTTTT
ATCCGGGCTCGGGGGATCAC

Downstream 100 bases:

>100_bases
TAACGACGACGGCACCCGCGGCGGCTTTGCGCGACACGCGCCGACCTGCCGCGGGTGTCGGCATGCCTCGACGGGTGGTG
TGACCGGGTCTCTTGAGGAG

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRKSLLATTILAAMVAAGAAQAADLATKMPVKAAPVAPAFSWTGFYIGAQGGYAWADNSFSNTHDLYNTYANDASYTLDG
GLVGGVIGYNYQINNIVLGVEADANWADISGSGSVLRAGELATNCIVSNNPCSSKIDALGTITARLGVAFDRVLLYAKGG
AAWANVKHTAGSTDYEYPEFSYSASNSNTRWGWTVGAGVEWAFFNNWSAKVEYNYIDLGSNDVTFNFVPNTYMPAYTSTA
DTTVNLVKAGINYRF

Sequences:

>Translated_255_residues
MRKSLLATTILAAMVAAGAAQAADLATKMPVKAAPVAPAFSWTGFYIGAQGGYAWADNSFSNTHDLYNTYANDASYTLDG
GLVGGVIGYNYQINNIVLGVEADANWADISGSGSVLRAGELATNCIVSNNPCSSKIDALGTITARLGVAFDRVLLYAKGG
AAWANVKHTAGSTDYEYPEFSYSASNSNTRWGWTVGAGVEWAFFNNWSAKVEYNYIDLGSNDVTFNFVPNTYMPAYTSTA
DTTVNLVKAGINYRF
>Mature_255_residues
MRKSLLATTILAAMVAAGAAQAADLATKMPVKAAPVAPAFSWTGFYIGAQGGYAWADNSFSNTHDLYNTYANDASYTLDG
GLVGGVIGYNYQINNIVLGVEADANWADISGSGSVLRAGELATNCIVSNNPCSSKIDALGTITARLGVAFDRVLLYAKGG
AAWANVKHTAGSTDYEYPEFSYSASNSNTRWGWTVGAGVEWAFFNNWSAKVEYNYIDLGSNDVTFNFVPNTYMPAYTSTA
DTTVNLVKAGINYRF

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 27160; Mature: 27160

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSLLATTILAAMVAAGAAQAADLATKMPVKAAPVAPAFSWTGFYIGAQGGYAWADNSF
CCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCC
SNTHDLYNTYANDASYTLDGGLVGGVIGYNYQINNIVLGVEADANWADISGSGSVLRAGE
CCCHHHHHHHCCCCCEEECCCEEEEEEECCEEECEEEEEEECCCCEEEECCCCCEEECCC
LATNCIVSNNPCSSKIDALGTITARLGVAFDRVLLYAKGGAAWANVKHTAGSTDYEYPEF
CEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEECCCCCCCCCCCE
SYSASNSNTRWGWTVGAGVEWAFFNNWSAKVEYNYIDLGSNDVTFNFVPNTYMPAYTSTA
EEECCCCCCEEEEEECCCEEEEEECCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCC
DTTVNLVKAGINYRF
CCEEEEEEECCCCCC
>Mature Secondary Structure
MRKSLLATTILAAMVAAGAAQAADLATKMPVKAAPVAPAFSWTGFYIGAQGGYAWADNSF
CCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCC
SNTHDLYNTYANDASYTLDGGLVGGVIGYNYQINNIVLGVEADANWADISGSGSVLRAGE
CCCHHHHHHHCCCCCEEECCCEEEEEEECCEEECEEEEEEECCCCEEEECCCCCEEECCC
LATNCIVSNNPCSSKIDALGTITARLGVAFDRVLLYAKGGAAWANVKHTAGSTDYEYPEF
CEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEECCCCCCCCCCCE
SYSASNSNTRWGWTVGAGVEWAFFNNWSAKVEYNYIDLGSNDVTFNFVPNTYMPAYTSTA
EEECCCCCCEEEEEECCCEEEEEECCCEEEEEEEEEEECCCCEEEEECCCCCCCCCCCCC
DTTVNLVKAGINYRF
CCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]