Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is paaK [H]
Identifier: 154245810
GI number: 154245810
Start: 2102193
End: 2103515
Strand: Direct
Name: paaK [H]
Synonym: Xaut_1866
Alternate gene names: 154245810
Gene position: 2102193-2103515 (Clockwise)
Preceding gene: 154245809
Following gene: 154245815
Centisome position: 39.6
GC content: 68.93
Gene sequence:
>1323_bases ATGGCCCCCTCTCCCGCTTGCAGGGGTGGGCTGGGGAGGGGGAAGGGGCGTCCGGATTCTGGCAATAGAGACTGTCACAT GACCGATCCGAACCGCCATTACGATGCGTGCGAGACCCGCGATCCCGAAGCCCGTGAACAGGCACTGATGGCGGCGCTTG CCGCCCAGGTCGCTCACGCCAAGGCGAAGGCGCCCTATTTCGCGCGCCTCTTCAAGGACGTGGACCCGCAGGCGGTGACC ACCCGCGCGGCGCTGGCGAAGCTCCCCGTCACCCGCAAGTCGGACCTTTTGGAGATCCAGCCGAAGAGCTATCCCTTCGG CGGCCTCAATGCGACGGCGCCGGGCAAGCTGGCGCGCATCTTCATGTCGCCGGGGCCGATCTATGATCCGGAAGGCCATG GCGCCGACTTCTGGCGCTTCGCCCGCGGCCTGTTCGCGGCCGGCTTCCGGGCCGGCGACATCGTCCACAACTGCTTTTCC TATCACCTCACCCCGGCCGGCTCGATGATCGAGAGCGGCGCCCATGCGCTCGGCTGCGCGGTGGTTCCGGCGGGGGTCGG CCAGACCGACCTGCAATTGCGCGCCATCGCCGACATCCGACCCCAGGGCTATGGCGGCACGCCGTCCTTCCTGAAGATCC TGGTGGACAAGGCGCGGGAGACCGGCACCGACATTTCCTCCCTCAAGAAGGCTCTGGTGACGGGGGAAGCCTTCCTGCCC GCCCATCGCGCCGAGCTGAAGGCCGCGGGCATTGCCGCCCGGCAGTGCTATGGCTCCGCCGACCTCGGCCTCGTCGCTTA CGAGAGCGAGGCGGAAGAGGGCATGATCGTGGACGAGGGCTGCCTCGTGGAAATCCTGCGCCCCGGCACCGGCGATCCGG TGGAAGCCGATGGTGAGGTCGGCGAGGTGGTCGTCACCCTGTTCGAGCCCGACTATCCCCTGGTGCGTTTCGCCACCGGC GATCTTTCGGCGGTGCTGCCGGGCTTCAGCCCCTGCGGGCGCACCAACGTCCGCCTCAAGGGCTGGATGGGCCGCGCCGA CCAGGTGACCAAGATCCGCGGCATGTTCGTGCACCCGGTGCAGGTGAGCGCGGCGGTGAAGAAGCATCCGGCGGTGGCGA AGGCCCGCCTCGTGGTGGATCGCATCGGCGATGCCGACGACATGCTGCTGGAGGTGGAAGTTCAGGACGCCGCAGCGCTG TCGCAGGAGGCGCTGCTGGACGACCTGCGCGCCACCACCAAGCTGCGCGGCCGCGTGGCCCTGCTGGTGCCGGGTACGCT GCCGGCTGACGCCAAGACCATCGAGGACCGCCGGCCGGTGTGA
Upstream 100 bases:
>100_bases CCGCAAACGGTGGTTGTGACGGCTTGAACATGGCTTTCGGCTCCGCCCCCTCCCAACCCTCGCCCGCGAGCGGGAGAGGG CTTTTCCCGCTCTCTCCGCC
Downstream 100 bases:
>100_bases GGCCGGTGCGGCGCCGGTAACGACTCAGCGTGGGTTTGAGAACTCTCCCGGTTGGACGCTGTCAGCTCTCACTGACGCTT AATTGCCTGCTTCAAGCGGT
Product: coenzyme F390 synthetase
Products: NA
Alternate protein names: Phenylacetyl-CoA ligase; PA-CoA ligase [H]
Number of amino acids: Translated: 440; Mature: 439
Protein sequence:
>440_residues MAPSPACRGGLGRGKGRPDSGNRDCHMTDPNRHYDACETRDPEAREQALMAALAAQVAHAKAKAPYFARLFKDVDPQAVT TRAALAKLPVTRKSDLLEIQPKSYPFGGLNATAPGKLARIFMSPGPIYDPEGHGADFWRFARGLFAAGFRAGDIVHNCFS YHLTPAGSMIESGAHALGCAVVPAGVGQTDLQLRAIADIRPQGYGGTPSFLKILVDKARETGTDISSLKKALVTGEAFLP AHRAELKAAGIAARQCYGSADLGLVAYESEAEEGMIVDEGCLVEILRPGTGDPVEADGEVGEVVVTLFEPDYPLVRFATG DLSAVLPGFSPCGRTNVRLKGWMGRADQVTKIRGMFVHPVQVSAAVKKHPAVAKARLVVDRIGDADDMLLEVEVQDAAAL SQEALLDDLRATTKLRGRVALLVPGTLPADAKTIEDRRPV
Sequences:
>Translated_440_residues MAPSPACRGGLGRGKGRPDSGNRDCHMTDPNRHYDACETRDPEAREQALMAALAAQVAHAKAKAPYFARLFKDVDPQAVT TRAALAKLPVTRKSDLLEIQPKSYPFGGLNATAPGKLARIFMSPGPIYDPEGHGADFWRFARGLFAAGFRAGDIVHNCFS YHLTPAGSMIESGAHALGCAVVPAGVGQTDLQLRAIADIRPQGYGGTPSFLKILVDKARETGTDISSLKKALVTGEAFLP AHRAELKAAGIAARQCYGSADLGLVAYESEAEEGMIVDEGCLVEILRPGTGDPVEADGEVGEVVVTLFEPDYPLVRFATG DLSAVLPGFSPCGRTNVRLKGWMGRADQVTKIRGMFVHPVQVSAAVKKHPAVAKARLVVDRIGDADDMLLEVEVQDAAAL SQEALLDDLRATTKLRGRVALLVPGTLPADAKTIEDRRPV >Mature_439_residues APSPACRGGLGRGKGRPDSGNRDCHMTDPNRHYDACETRDPEAREQALMAALAAQVAHAKAKAPYFARLFKDVDPQAVTT RAALAKLPVTRKSDLLEIQPKSYPFGGLNATAPGKLARIFMSPGPIYDPEGHGADFWRFARGLFAAGFRAGDIVHNCFSY HLTPAGSMIESGAHALGCAVVPAGVGQTDLQLRAIADIRPQGYGGTPSFLKILVDKARETGTDISSLKKALVTGEAFLPA HRAELKAAGIAARQCYGSADLGLVAYESEAEEGMIVDEGCLVEILRPGTGDPVEADGEVGEVVVTLFEPDYPLVRFATGD LSAVLPGFSPCGRTNVRLKGWMGRADQVTKIRGMFVHPVQVSAAVKKHPAVAKARLVVDRIGDADDMLLEVEVQDAAALS QEALLDDLRATTKLRGRVALLVPGTLPADAKTIEDRRPV
Specific function: Catalyzes the activation of phenylacetic acid to phenylacetyl-CoA [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787664, Length=413, Percent_Identity=30.2663438256659, Blast_Score=127, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000873 - InterPro: IPR011880 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.30 [H]
Molecular weight: Translated: 46807; Mature: 46676
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPSPACRGGLGRGKGRPDSGNRDCHMTDPNRHYDACETRDPEAREQALMAALAAQVAHA CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KAKAPYFARLFKDVDPQAVTTRAALAKLPVTRKSDLLEIQPKSYPFGGLNATAPGKLARI HHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEE FMSPGPIYDPEGHGADFWRFARGLFAAGFRAGDIVHNCFSYHLTPAGSMIESGAHALGCA EECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHCCCHHEEEE VVPAGVGQTDLQLRAIADIRPQGYGGTPSFLKILVDKARETGTDISSLKKALVTGEAFLP EECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHCC AHRAELKAAGIAARQCYGSADLGLVAYESEAEEGMIVDEGCLVEILRPGTGDPVEADGEV HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEECCCCEEEEECCCCCCCCCCCCCC GEVVVTLFEPDYPLVRFATGDLSAVLPGFSPCGRTNVRLKGWMGRADQVTKIRGMFVHPV CEEEEEEECCCCCEEEEECCCHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHCCEEECCC QVSAAVKKHPAVAKARLVVDRIGDADDMLLEVEVQDAAALSQEALLDDLRATTKLRGRVA HHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEE LLVPGTLPADAKTIEDRRPV EEECCCCCCCCHHCCCCCCC >Mature Secondary Structure APSPACRGGLGRGKGRPDSGNRDCHMTDPNRHYDACETRDPEAREQALMAALAAQVAHA CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KAKAPYFARLFKDVDPQAVTTRAALAKLPVTRKSDLLEIQPKSYPFGGLNATAPGKLARI HHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEE FMSPGPIYDPEGHGADFWRFARGLFAAGFRAGDIVHNCFSYHLTPAGSMIESGAHALGCA EECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHCCCHHEEEE VVPAGVGQTDLQLRAIADIRPQGYGGTPSFLKILVDKARETGTDISSLKKALVTGEAFLP EECCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHCC AHRAELKAAGIAARQCYGSADLGLVAYESEAEEGMIVDEGCLVEILRPGTGDPVEADGEV HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEECCCCEEEEECCCCCCCCCCCCCC GEVVVTLFEPDYPLVRFATGDLSAVLPGFSPCGRTNVRLKGWMGRADQVTKIRGMFVHPV CEEEEEEECCCCCEEEEECCCHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHCCEEECCC QVSAAVKKHPAVAKARLVVDRIGDADDMLLEVEVQDAAALSQEALLDDLRATTKLRGRVA HHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCEEE LLVPGTLPADAKTIEDRRPV EEECCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]