Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

Click here to switch to the map view.

The map label for this gene is 154244628

Identifier: 154244628

GI number: 154244628

Start: 762809

End: 764164

Strand: Reverse

Name: 154244628

Synonym: Xaut_0677

Alternate gene names: NA

Gene position: 764164-762809 (Counterclockwise)

Preceding gene: 154244634

Following gene: 154244627

Centisome position: 14.39

GC content: 63.57

Gene sequence:

>1356_bases
ATGGATCACCTGGAGGGTGCGGGCTTGGCGCGGGGAGATCGGGTTGATTTCGACCGCCGTGTGCGTCTGGAGTTCCGTGG
TGCGCAGATCAGTTCAGACGGTGGCCTGCTGGTGATGCGCGAGCTTGATGACGTGCTCGGCCTGTCCAATCTGGCGTCGG
AGGCGCTGCGAGACAGCCGCACCGGGAAGAACACGCTCCATCGGCTTGACGGATTGTTCCGGCAATCGGTGTTCGGACGA
CTGGCCGGATACGAGGATGTGAACGATGCCGACCGCTTGGCCCTCGATCCCGTGATGCGTCAGGTCGTTGGCGGCAGGGC
CGTCGAGGCGCAAGCTGCTTCGGCATCGCAGATGGGACGGTTCGAGACCGAGACGCTGGCTCTGGCCGCGAACCGGGCGG
CGCTGGCCGATCTGAACGGCCAATGGATCGACCGGTTTCATGACCGCAACGGGTTGAAATACATCGTGCTGGACATGGAC
AGCTCGGTCAGCCCCACCCACGGCGATCAGGAAGGTGCTGCCTGGAACGGGCATTTCGACTGCACCTGCTATCACCCCAT
CTTCTTGTTCAACCAGTTTGGCATGCTGGAGCGCTGCGCCCTGCGTAACGGCAATGTCCACAGCGCCGATGGCTGGCGGG
ATGTCCTTGATCCCGTCATTGCCCGATATGCTGGCCGCGACCTTGGTGGACGCTTCTTCCGGGCCGACGCTGCCTACGCG
ATCCCCGCGATCTATATGCGGCTGGAAGAAGCCAGGTTCTTCTACGCCATCCGTCTGCCCGCCAACGCCGTCTTGCGCGA
GAAGATCGCGCATCGGCTGACACGGCCCGTGGGACGGCCTTCGCTGACCAAGGTCAAACGGTTCTTCGAGGACTTCGAGT
ATCAGGCGGCGTCCTGGGACAAGCCGCGCCGCGTCATCGCCAAGATCGAATGGCATCCGGGCGAGCTGTTCCCCAAAGTC
GGCTTCATCGTCACCAACCTGCCGATGGAGCCAGACTGGGTGGTGAGGTTCTACAACCAGCGCGGCACCGCAGAGCAGCA
CATCAAGGAAGGCAAATATGCCTTTCGCTGGACGCGGCTGTCATGCCGGAAGTTCCGGCACAACGAGGTGCGGCTGCAAC
TGCACGCGCTGGCCTACAACCTGGCAACCTTCCTGCGCTGCATCGAACTGCCCGAGGCCATGGCGGACTGGTCGTTGACC
AGCCTGCAACTCAAGCTGATCAAGATCGGCGCCCGCGTCGTCCGCCACGCCCGCGCCATTACCTTCCAGTTGGCCGAGGT
CGCCGTCACCGGCCCGATGGTGCGGGCCGTCCTTGCCGCCATCCGCCGTCTTCGAACGCCTCCGTCATGCGCATGA

Upstream 100 bases:

>100_bases
TTTCAGCCCACATTCTCCAAGTAAGTCGCTGATTTCGCTGTCGTAATCGTGATATTTCGCATATAAATCATGGCGTTGAC
GGCTGCGAGGGGCGCGTTTC

Downstream 100 bases:

>100_bases
CCACGATCCATGCCCAAGCTGAACGAAAGCGGCAGGACAGGTCCGTCTGCCGCGCGGAAAAGCGGCTCTGCCGGGCCAGA
ATGCTGCGGGTTCGAGGCTT

Product: transposase IS4 family protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; ISSpo2 Transposase; IS4 Family Transposase; Transposase Family Protein; Transposase Is4 Family Protein; Transposase For Insertion Sequence NGRIS-20g; ISEcp1 Transposase; Transposase-Like Protein; Transposase Is4-Like Protein

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MDHLEGAGLARGDRVDFDRRVRLEFRGAQISSDGGLLVMRELDDVLGLSNLASEALRDSRTGKNTLHRLDGLFRQSVFGR
LAGYEDVNDADRLALDPVMRQVVGGRAVEAQAASASQMGRFETETLALAANRAALADLNGQWIDRFHDRNGLKYIVLDMD
SSVSPTHGDQEGAAWNGHFDCTCYHPIFLFNQFGMLERCALRNGNVHSADGWRDVLDPVIARYAGRDLGGRFFRADAAYA
IPAIYMRLEEARFFYAIRLPANAVLREKIAHRLTRPVGRPSLTKVKRFFEDFEYQAASWDKPRRVIAKIEWHPGELFPKV
GFIVTNLPMEPDWVVRFYNQRGTAEQHIKEGKYAFRWTRLSCRKFRHNEVRLQLHALAYNLATFLRCIELPEAMADWSLT
SLQLKLIKIGARVVRHARAITFQLAEVAVTGPMVRAVLAAIRRLRTPPSCA

Sequences:

>Translated_451_residues
MDHLEGAGLARGDRVDFDRRVRLEFRGAQISSDGGLLVMRELDDVLGLSNLASEALRDSRTGKNTLHRLDGLFRQSVFGR
LAGYEDVNDADRLALDPVMRQVVGGRAVEAQAASASQMGRFETETLALAANRAALADLNGQWIDRFHDRNGLKYIVLDMD
SSVSPTHGDQEGAAWNGHFDCTCYHPIFLFNQFGMLERCALRNGNVHSADGWRDVLDPVIARYAGRDLGGRFFRADAAYA
IPAIYMRLEEARFFYAIRLPANAVLREKIAHRLTRPVGRPSLTKVKRFFEDFEYQAASWDKPRRVIAKIEWHPGELFPKV
GFIVTNLPMEPDWVVRFYNQRGTAEQHIKEGKYAFRWTRLSCRKFRHNEVRLQLHALAYNLATFLRCIELPEAMADWSLT
SLQLKLIKIGARVVRHARAITFQLAEVAVTGPMVRAVLAAIRRLRTPPSCA
>Mature_451_residues
MDHLEGAGLARGDRVDFDRRVRLEFRGAQISSDGGLLVMRELDDVLGLSNLASEALRDSRTGKNTLHRLDGLFRQSVFGR
LAGYEDVNDADRLALDPVMRQVVGGRAVEAQAASASQMGRFETETLALAANRAALADLNGQWIDRFHDRNGLKYIVLDMD
SSVSPTHGDQEGAAWNGHFDCTCYHPIFLFNQFGMLERCALRNGNVHSADGWRDVLDPVIARYAGRDLGGRFFRADAAYA
IPAIYMRLEEARFFYAIRLPANAVLREKIAHRLTRPVGRPSLTKVKRFFEDFEYQAASWDKPRRVIAKIEWHPGELFPKV
GFIVTNLPMEPDWVVRFYNQRGTAEQHIKEGKYAFRWTRLSCRKFRHNEVRLQLHALAYNLATFLRCIELPEAMADWSLT
SLQLKLIKIGARVVRHARAITFQLAEVAVTGPMVRAVLAAIRRLRTPPSCA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51065; Mature: 51065

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHLEGAGLARGDRVDFDRRVRLEFRGAQISSDGGLLVMRELDDVLGLSNLASEALRDSR
CCCCCCCCCCCCCCCCCCCEEEEEEECCEECCCCCEEEEEHHHHHHHHHHHHHHHHHHCC
TGKNTLHRLDGLFRQSVFGRLAGYEDVNDADRLALDPVMRQVVGGRAVEAQAASASQMGR
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
FETETLALAANRAALADLNGQWIDRFHDRNGLKYIVLDMDSSVSPTHGDQEGAAWNGHFD
CCHHHHHHECCCHHHHCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEECCCEE
CTCYHPIFLFNQFGMLERCALRNGNVHSADGWRDVLDPVIARYAGRDLGGRFFRADAAYA
EEEECHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHH
IPAIYMRLEEARFFYAIRLPANAVLREKIAHRLTRPVGRPSLTKVKRFFEDFEYQAASWD
HHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC
KPRRVIAKIEWHPGELFPKVGFIVTNLPMEPDWVVRFYNQRGTAEQHIKEGKYAFRWTRL
CCCEEEEEEECCCCHHCCCCCEEEECCCCCCCHHEEEECCCCCHHHHHHCCCEEEEEEHH
SCRKFRHNEVRLQLHALAYNLATFLRCIELPEAMADWSLTSLQLKLIKIGARVVRHARAI
HHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
TFQLAEVAVTGPMVRAVLAAIRRLRTPPSCA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDHLEGAGLARGDRVDFDRRVRLEFRGAQISSDGGLLVMRELDDVLGLSNLASEALRDSR
CCCCCCCCCCCCCCCCCCCEEEEEEECCEECCCCCEEEEEHHHHHHHHHHHHHHHHHHCC
TGKNTLHRLDGLFRQSVFGRLAGYEDVNDADRLALDPVMRQVVGGRAVEAQAASASQMGR
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
FETETLALAANRAALADLNGQWIDRFHDRNGLKYIVLDMDSSVSPTHGDQEGAAWNGHFD
CCHHHHHHECCCHHHHCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEECCCEE
CTCYHPIFLFNQFGMLERCALRNGNVHSADGWRDVLDPVIARYAGRDLGGRFFRADAAYA
EEEECHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHH
IPAIYMRLEEARFFYAIRLPANAVLREKIAHRLTRPVGRPSLTKVKRFFEDFEYQAASWD
HHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC
KPRRVIAKIEWHPGELFPKVGFIVTNLPMEPDWVVRFYNQRGTAEQHIKEGKYAFRWTRL
CCCEEEEEEECCCCHHCCCCCEEEECCCCCCCHHEEEECCCCCHHHHHHCCCEEEEEEHH
SCRKFRHNEVRLQLHALAYNLATFLRCIELPEAMADWSLTSLQLKLIKIGARVVRHARAI
HHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
TFQLAEVAVTGPMVRAVLAAIRRLRTPPSCA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA