Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
---|---|
Accession | NC_009720 |
Length | 5,308,934 |
Click here to switch to the map view.
The map label for this gene is 154244627
Identifier: 154244627
GI number: 154244627
Start: 761408
End: 762511
Strand: Reverse
Name: 154244627
Synonym: Xaut_0676
Alternate gene names: NA
Gene position: 762511-761408 (Counterclockwise)
Preceding gene: 154244628
Following gene: 154244625
Centisome position: 14.36
GC content: 69.47
Gene sequence:
>1104_bases ATGAACCGCGACAGCCTGGAACTGAGATCGACCGTCACCGAAGACGGCACCCTGCGGCTGCATCTGGAGCCCGTGACCCT GCCCGAGCCCGGGCCGGGGCATCTTCTGGTGCGGATCGAGGCGGCGCCGATCAACCCCTCGGATCTGGGGCTGATGTTCG GGCCGGCCGACATGACCACGCTGGCGAAGGACGGCGCGGCGCTGACTGCGCGGATCCCGGGCCGCGCCATGCCGGCGCTG CGGGCCAGGATCGGTCAGTCGCTCCCCGCGGGCAATGAGGGTGCCGGGACGGTCATCGCGGCGGGGCCCGATCAGCAGCA CCTTGTCGGCAGCCGCGTCGCCATGCTCGGCGGCGCCATGTATGCCCGCCTGCGCCTGATCGCGGCCAAGGACTGCCTGC CCTTGCCCGACGGCACCTCGGCCGAGGCTGGCGCCGCGCTGTTCGTCAACCCGCTGACCGCGCTTGGTTTTGTGGAAACC ATGCGCGCCGAAGGACATACGGCCATCGTCCACGCCCCCGCCGCCTCCAACCTCGGGCAGATGCTGGTGCGTATCTGCAA GGCGGATGGCATCGGCCTTGTGAACATCGTCCGTAGCCCCGAGCAGGTCGCGCTGCTGCGCGGTCTGGGGGCAGAGCATG CCGTGGACAGCAGCGCCGAGACCTTCCGCGAGGACCTGACCGAGGCCATTGCCGCGACCGGCGCCACGCTGTCCTTCGAC GCCATCGGCGGCGGCGAGATGACCAGCACCATCCTCAACGCGATGGAGGCGGTCGCGGCGCGCAGCATGGCCAGCTATGA CCGCTACGGTTCGGCGGTGCTCAAGCAGGGCTATATCTACGGCGCGCTCGACACCGGCCCCACCACACTGCGCCGGGGCT TCGGCTTCAGCTGGAGCATCGGCGGCTGGCTGCTGTTCCATGCCCTGCAACGCCTCGCCCCCGCCACGGTGCAGGCGATG CGCCAGCGGGTGGTCGATGAAATGGGCACCACCTTCGCCAGTTCCTACACCGCCCGCATCACGCTGGAACAGGCGCTGGA GCCGGAAACGGTGGCCGCCTACATGCGCAAGTCGACGGGGGCGAAGTACCTGATCACGCCTTAA
Upstream 100 bases:
>100_bases GGCAGGCTACTTGGGGAATGTCGGGTCAGGCAGTTGACCGAGAACACGTTGGACCGCGACAAGTACCGAGGTTGAGGGTA GGATAGCATAGGAGGCGCCA
Downstream 100 bases:
>100_bases GGGCGCCCCCGCGCATCATCGACGCGCATCCCCACCTCTCGAATTGGTTCCTGGCTGCGTGATCGAACCCGACACCAACT AAACGGCTTCTTTCAGGAAT
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: Quinone Oxidoreductase; NADH Oxidoreductase; NADPHQuinone Reductase; Alcohol Dehydrogenase GroES Domain Protein; Alcohol Dehydrogenase GroES-Like Protein; Zinc-Containing Alcohol Dehydrogenase Superfamily Protein; NADPH2Quinone Reductase; Dehydrogenase/Oxidoreductase; Quinone Oxidoreductase NADPH-Dependent; Zn-Dependent Oxidoreductase; Alcohol Dehydrogenase GroES-Like Domain Family; Zn-Dependent; Oxidoreductase; Alcohol Dehydrogenase GroES Domain-Containing Protein; Dehydrogenase/Reductase; NADH Oxidoreductas; Zn-Dependent Alcohol Dehydrogenase; Trans-2-Enoyl-CoA Reductase; Alcohol Dehydrogenase-Like Protein; NADH Oxidoreductase-Like; NADPH Quinone Oxidoreductase
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MNRDSLELRSTVTEDGTLRLHLEPVTLPEPGPGHLLVRIEAAPINPSDLGLMFGPADMTTLAKDGAALTARIPGRAMPAL RARIGQSLPAGNEGAGTVIAAGPDQQHLVGSRVAMLGGAMYARLRLIAAKDCLPLPDGTSAEAGAALFVNPLTALGFVET MRAEGHTAIVHAPAASNLGQMLVRICKADGIGLVNIVRSPEQVALLRGLGAEHAVDSSAETFREDLTEAIAATGATLSFD AIGGGEMTSTILNAMEAVAARSMASYDRYGSAVLKQGYIYGALDTGPTTLRRGFGFSWSIGGWLLFHALQRLAPATVQAM RQRVVDEMGTTFASSYTARITLEQALEPETVAAYMRKSTGAKYLITP
Sequences:
>Translated_367_residues MNRDSLELRSTVTEDGTLRLHLEPVTLPEPGPGHLLVRIEAAPINPSDLGLMFGPADMTTLAKDGAALTARIPGRAMPAL RARIGQSLPAGNEGAGTVIAAGPDQQHLVGSRVAMLGGAMYARLRLIAAKDCLPLPDGTSAEAGAALFVNPLTALGFVET MRAEGHTAIVHAPAASNLGQMLVRICKADGIGLVNIVRSPEQVALLRGLGAEHAVDSSAETFREDLTEAIAATGATLSFD AIGGGEMTSTILNAMEAVAARSMASYDRYGSAVLKQGYIYGALDTGPTTLRRGFGFSWSIGGWLLFHALQRLAPATVQAM RQRVVDEMGTTFASSYTARITLEQALEPETVAAYMRKSTGAKYLITP >Mature_367_residues MNRDSLELRSTVTEDGTLRLHLEPVTLPEPGPGHLLVRIEAAPINPSDLGLMFGPADMTTLAKDGAALTARIPGRAMPAL RARIGQSLPAGNEGAGTVIAAGPDQQHLVGSRVAMLGGAMYARLRLIAAKDCLPLPDGTSAEAGAALFVNPLTALGFVET MRAEGHTAIVHAPAASNLGQMLVRICKADGIGLVNIVRSPEQVALLRGLGAEHAVDSSAETFREDLTEAIAATGATLSFD AIGGGEMTSTILNAMEAVAARSMASYDRYGSAVLKQGYIYGALDTGPTTLRRGFGFSWSIGGWLLFHALQRLAPATVQAM RQRVVDEMGTTFASSYTARITLEQALEPETVAAYMRKSTGAKYLITP
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38510; Mature: 38510
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRDSLELRSTVTEDGTLRLHLEPVTLPEPGPGHLLVRIEAAPINPSDLGLMFGPADMTT CCCCHHHHHHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEECCCCHHH LAKDGAALTARIPGRAMPALRARIGQSLPAGNEGAGTVIAAGPDQQHLVGSRVAMLGGAM HHCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH YARLRLIAAKDCLPLPDGTSAEAGAALFVNPLTALGFVETMRAEGHTAIVHAPAASNLGQ HHHHHHHHHCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCEEEEECCCCCCHHH MLVRICKADGIGLVNIVRSPEQVALLRGLGAEHAVDSSAETFREDLTEAIAATGATLSFD HHHHHHHCCCCCEEEECCCCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHCCCEEEEE AIGGGEMTSTILNAMEAVAARSMASYDRYGSAVLKQGYIYGALDTGPTTLRRGFGFSWSI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCCCCH GGWLLFHALQRLAPATVQAMRQRVVDEMGTTFASSYTARITLEQALEPETVAAYMRKSTG HHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHCCEEEEEEHHHHCCHHHHHHHHHHCCC AKYLITP CCEEECC >Mature Secondary Structure MNRDSLELRSTVTEDGTLRLHLEPVTLPEPGPGHLLVRIEAAPINPSDLGLMFGPADMTT CCCCHHHHHHHCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCEEEECCCCHHH LAKDGAALTARIPGRAMPALRARIGQSLPAGNEGAGTVIAAGPDQQHLVGSRVAMLGGAM HHCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH YARLRLIAAKDCLPLPDGTSAEAGAALFVNPLTALGFVETMRAEGHTAIVHAPAASNLGQ HHHHHHHHHCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHCCCCEEEEECCCCCCHHH MLVRICKADGIGLVNIVRSPEQVALLRGLGAEHAVDSSAETFREDLTEAIAATGATLSFD HHHHHHHCCCCCEEEECCCCHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHCCCEEEEE AIGGGEMTSTILNAMEAVAARSMASYDRYGSAVLKQGYIYGALDTGPTTLRRGFGFSWSI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHCCCCCCCH GGWLLFHALQRLAPATVQAMRQRVVDEMGTTFASSYTARITLEQALEPETVAAYMRKSTG HHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHCCEEEEEEHHHHCCHHHHHHHHHHCCC AKYLITP CCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA