Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is coxM [H]

Identifier: 154244599

GI number: 154244599

Start: 727468

End: 728331

Strand: Reverse

Name: coxM [H]

Synonym: Xaut_0647

Alternate gene names: 154244599

Gene position: 728331-727468 (Counterclockwise)

Preceding gene: 154244600

Following gene: 154244598

Centisome position: 13.72

GC content: 73.26

Gene sequence:

>864_bases
ATGAAGCCCGCGCCCTTCCGCCTGGAGCGTCCGCGCGACATCGCCGGTGCCACGGCTCTCCTCGCCACCGGCGGCGACGG
GGCGAAGGCCATGGCCGGCTCGCAGTCCCTCGGCCCCATGCTGAACCTGCGCCTCGCCGCGCCCGACCTGGTCGTGGACC
TCACCGGCATCGACGCCTTGCGCACGGTGCGCGAGGAGCCGGGCAACATCGTCTATGGCGCCCTCGTCACCCATGCGGAC
GTGGAAGACGGGCGGGCTCCGGACGTGGGCGCGCACGTCCTGCGCAGGGTGGCGGGCGGCATCGCCTATCGCGCGGTGCG
CAATCGCGGCACCATCGGCGGAAGCCTTGCCCATGCCGACCCCGCAGCCGACTGGGTGAATGCCCTGTCCGCCCTCGGCG
CCGAAGTGGAGATCGCCGGCCCCGCCGGCACCCGGCGCCTCACCCTGGCGCAGTTTTTCACGGGCGCTCTTTCGACCGCA
CTGGCGGCCGGGGAAATCCTCGTCGCCGTGCGGGTGCCCAAGGTGCCCGCCTCCGCGCGCTTCGGCTATGTGAAGCACTG
CCGGAAGGTGGGCGAGTTCGCCCACGCCATCGGCGCCGTGCTGGTGGACCCGGCAGCGGGAACCTGTCGCGCGCTGATGG
GCGCCATCGACGCCCCGCCCCTCGTCTTCCCCGATGCCGGCTTCCTCTTTGGCGGCCGCATCGATGCCGGTTTTGCCGCC
CGCTTCGACGCAGCCGCCGCCGACGCCGCCCTCACCGCCGCCGGCATGGACGATGCGGTCGACCGCCACGTGCATGTGGA
GGTGCTGCGCCGCGCCGCTGCGCAGGCGGCGAACCTCTTCACCGAGACGCGGAGCGCCGCATGA

Upstream 100 bases:

>100_bases
CGCTGCGCCCGCTGGGAAGCGAGATGCTGCGCGCGCCCGTCACCCCGCGCCGCATCGTCGAGAGCGTGCTTGCGGCCCGC
GCCAGCCGCAGGAGCGCCGC

Downstream 100 bases:

>100_bases
ACGCCCTGCCCCGGCCGGAAGGCACAGCCCTTGGCGCCTCGCCCATGATCACCCTCACCCTCAACGGCCGCTCCGTCGCT
GCGACGGCGGAAGCGCGCAC

Product: molybdopterin dehydrogenase FAD-binding

Products: NA

Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKPAPFRLERPRDIAGATALLATGGDGAKAMAGSQSLGPMLNLRLAAPDLVVDLTGIDALRTVREEPGNIVYGALVTHAD
VEDGRAPDVGAHVLRRVAGGIAYRAVRNRGTIGGSLAHADPAADWVNALSALGAEVEIAGPAGTRRLTLAQFFTGALSTA
LAAGEILVAVRVPKVPASARFGYVKHCRKVGEFAHAIGAVLVDPAAGTCRALMGAIDAPPLVFPDAGFLFGGRIDAGFAA
RFDAAAADAALTAAGMDDAVDRHVHVEVLRRAAAQAANLFTETRSAA

Sequences:

>Translated_287_residues
MKPAPFRLERPRDIAGATALLATGGDGAKAMAGSQSLGPMLNLRLAAPDLVVDLTGIDALRTVREEPGNIVYGALVTHAD
VEDGRAPDVGAHVLRRVAGGIAYRAVRNRGTIGGSLAHADPAADWVNALSALGAEVEIAGPAGTRRLTLAQFFTGALSTA
LAAGEILVAVRVPKVPASARFGYVKHCRKVGEFAHAIGAVLVDPAAGTCRALMGAIDAPPLVFPDAGFLFGGRIDAGFAA
RFDAAAADAALTAAGMDDAVDRHVHVEVLRRAAAQAANLFTETRSAA
>Mature_287_residues
MKPAPFRLERPRDIAGATALLATGGDGAKAMAGSQSLGPMLNLRLAAPDLVVDLTGIDALRTVREEPGNIVYGALVTHAD
VEDGRAPDVGAHVLRRVAGGIAYRAVRNRGTIGGSLAHADPAADWVNALSALGAEVEIAGPAGTRRLTLAQFFTGALSTA
LAAGEILVAVRVPKVPASARFGYVKHCRKVGEFAHAIGAVLVDPAAGTCRALMGAIDAPPLVFPDAGFLFGGRIDAGFAA
RFDAAAADAALTAAGMDDAVDRHVHVEVLRRAAAQAANLFTETRSAA

Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.2.99.2 [H]

Molecular weight: Translated: 29351; Mature: 29351

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPAPFRLERPRDIAGATALLATGGDGAKAMAGSQSLGPMLNLRLAAPDLVVDLTGIDAL
CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCEEEEEECCCEEEEECCHHHH
RTVREEPGNIVYGALVTHADVEDGRAPDVGAHVLRRVAGGIAYRAVRNRGTIGGSLAHAD
HHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PAADWVNALSALGAEVEIAGPAGTRRLTLAQFFTGALSTALAAGEILVAVRVPKVPASAR
HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCC
FGYVKHCRKVGEFAHAIGAVLVDPAAGTCRALMGAIDAPPLVFPDAGFLFGGRIDAGFAA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCEEECCCCCCCHHH
RFDAAAADAALTAAGMDDAVDRHVHVEVLRRAAAQAANLFTETRSAA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKPAPFRLERPRDIAGATALLATGGDGAKAMAGSQSLGPMLNLRLAAPDLVVDLTGIDAL
CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCEEEEEECCCEEEEECCHHHH
RTVREEPGNIVYGALVTHADVEDGRAPDVGAHVLRRVAGGIAYRAVRNRGTIGGSLAHAD
HHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PAADWVNALSALGAEVEIAGPAGTRRLTLAQFFTGALSTALAAGEILVAVRVPKVPASAR
HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCC
FGYVKHCRKVGEFAHAIGAVLVDPAAGTCRALMGAIDAPPLVFPDAGFLFGGRIDAGFAA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCEEECCCCCCCHHH
RFDAAAADAALTAAGMDDAVDRHVHVEVLRRAAAQAANLFTETRSAA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7721710; 1510563; 2818128; 10430865; 12475995 [H]