Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is coxM [H]
Identifier: 154244599
GI number: 154244599
Start: 727468
End: 728331
Strand: Reverse
Name: coxM [H]
Synonym: Xaut_0647
Alternate gene names: 154244599
Gene position: 728331-727468 (Counterclockwise)
Preceding gene: 154244600
Following gene: 154244598
Centisome position: 13.72
GC content: 73.26
Gene sequence:
>864_bases ATGAAGCCCGCGCCCTTCCGCCTGGAGCGTCCGCGCGACATCGCCGGTGCCACGGCTCTCCTCGCCACCGGCGGCGACGG GGCGAAGGCCATGGCCGGCTCGCAGTCCCTCGGCCCCATGCTGAACCTGCGCCTCGCCGCGCCCGACCTGGTCGTGGACC TCACCGGCATCGACGCCTTGCGCACGGTGCGCGAGGAGCCGGGCAACATCGTCTATGGCGCCCTCGTCACCCATGCGGAC GTGGAAGACGGGCGGGCTCCGGACGTGGGCGCGCACGTCCTGCGCAGGGTGGCGGGCGGCATCGCCTATCGCGCGGTGCG CAATCGCGGCACCATCGGCGGAAGCCTTGCCCATGCCGACCCCGCAGCCGACTGGGTGAATGCCCTGTCCGCCCTCGGCG CCGAAGTGGAGATCGCCGGCCCCGCCGGCACCCGGCGCCTCACCCTGGCGCAGTTTTTCACGGGCGCTCTTTCGACCGCA CTGGCGGCCGGGGAAATCCTCGTCGCCGTGCGGGTGCCCAAGGTGCCCGCCTCCGCGCGCTTCGGCTATGTGAAGCACTG CCGGAAGGTGGGCGAGTTCGCCCACGCCATCGGCGCCGTGCTGGTGGACCCGGCAGCGGGAACCTGTCGCGCGCTGATGG GCGCCATCGACGCCCCGCCCCTCGTCTTCCCCGATGCCGGCTTCCTCTTTGGCGGCCGCATCGATGCCGGTTTTGCCGCC CGCTTCGACGCAGCCGCCGCCGACGCCGCCCTCACCGCCGCCGGCATGGACGATGCGGTCGACCGCCACGTGCATGTGGA GGTGCTGCGCCGCGCCGCTGCGCAGGCGGCGAACCTCTTCACCGAGACGCGGAGCGCCGCATGA
Upstream 100 bases:
>100_bases CGCTGCGCCCGCTGGGAAGCGAGATGCTGCGCGCGCCCGTCACCCCGCGCCGCATCGTCGAGAGCGTGCTTGCGGCCCGC GCCAGCCGCAGGAGCGCCGC
Downstream 100 bases:
>100_bases ACGCCCTGCCCCGGCCGGAAGGCACAGCCCTTGGCGCCTCGCCCATGATCACCCTCACCCTCAACGGCCGCTCCGTCGCT GCGACGGCGGAAGCGCGCAC
Product: molybdopterin dehydrogenase FAD-binding
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKPAPFRLERPRDIAGATALLATGGDGAKAMAGSQSLGPMLNLRLAAPDLVVDLTGIDALRTVREEPGNIVYGALVTHAD VEDGRAPDVGAHVLRRVAGGIAYRAVRNRGTIGGSLAHADPAADWVNALSALGAEVEIAGPAGTRRLTLAQFFTGALSTA LAAGEILVAVRVPKVPASARFGYVKHCRKVGEFAHAIGAVLVDPAAGTCRALMGAIDAPPLVFPDAGFLFGGRIDAGFAA RFDAAAADAALTAAGMDDAVDRHVHVEVLRRAAAQAANLFTETRSAA
Sequences:
>Translated_287_residues MKPAPFRLERPRDIAGATALLATGGDGAKAMAGSQSLGPMLNLRLAAPDLVVDLTGIDALRTVREEPGNIVYGALVTHAD VEDGRAPDVGAHVLRRVAGGIAYRAVRNRGTIGGSLAHADPAADWVNALSALGAEVEIAGPAGTRRLTLAQFFTGALSTA LAAGEILVAVRVPKVPASARFGYVKHCRKVGEFAHAIGAVLVDPAAGTCRALMGAIDAPPLVFPDAGFLFGGRIDAGFAA RFDAAAADAALTAAGMDDAVDRHVHVEVLRRAAAQAANLFTETRSAA >Mature_287_residues MKPAPFRLERPRDIAGATALLATGGDGAKAMAGSQSLGPMLNLRLAAPDLVVDLTGIDALRTVREEPGNIVYGALVTHAD VEDGRAPDVGAHVLRRVAGGIAYRAVRNRGTIGGSLAHADPAADWVNALSALGAEVEIAGPAGTRRLTLAQFFTGALSTA LAAGEILVAVRVPKVPASARFGYVKHCRKVGEFAHAIGAVLVDPAAGTCRALMGAIDAPPLVFPDAGFLFGGRIDAGFAA RFDAAAADAALTAAGMDDAVDRHVHVEVLRRAAAQAANLFTETRSAA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 29351; Mature: 29351
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPAPFRLERPRDIAGATALLATGGDGAKAMAGSQSLGPMLNLRLAAPDLVVDLTGIDAL CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCEEEEEECCCEEEEECCHHHH RTVREEPGNIVYGALVTHADVEDGRAPDVGAHVLRRVAGGIAYRAVRNRGTIGGSLAHAD HHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PAADWVNALSALGAEVEIAGPAGTRRLTLAQFFTGALSTALAAGEILVAVRVPKVPASAR HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCC FGYVKHCRKVGEFAHAIGAVLVDPAAGTCRALMGAIDAPPLVFPDAGFLFGGRIDAGFAA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCEEECCCCCCCHHH RFDAAAADAALTAAGMDDAVDRHVHVEVLRRAAAQAANLFTETRSAA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKPAPFRLERPRDIAGATALLATGGDGAKAMAGSQSLGPMLNLRLAAPDLVVDLTGIDAL CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCEEEEEECCCEEEEECCHHHH RTVREEPGNIVYGALVTHADVEDGRAPDVGAHVLRRVAGGIAYRAVRNRGTIGGSLAHAD HHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PAADWVNALSALGAEVEIAGPAGTRRLTLAQFFTGALSTALAAGEILVAVRVPKVPASAR HHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCC FGYVKHCRKVGEFAHAIGAVLVDPAAGTCRALMGAIDAPPLVFPDAGFLFGGRIDAGFAA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCEEECCCCCCCHHH RFDAAAADAALTAAGMDDAVDRHVHVEVLRRAAAQAANLFTETRSAA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7721710; 1510563; 2818128; 10430865; 12475995 [H]