Definition | Xanthobacter autotrophicus Py2 chromosome, complete genome. |
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Accession | NC_009720 |
Length | 5,308,934 |
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The map label for this gene is cutS [H]
Identifier: 154244598
GI number: 154244598
Start: 726254
End: 727471
Strand: Reverse
Name: cutS [H]
Synonym: Xaut_0646
Alternate gene names: 154244598
Gene position: 727471-726254 (Counterclockwise)
Preceding gene: 154244599
Following gene: 154244597
Centisome position: 13.7
GC content: 72.41
Gene sequence:
>1218_bases ATGAACGCCCTGCCCCGGCCGGAAGGCACAGCCCTTGGCGCCTCGCCCATGATCACCCTCACCCTCAACGGCCGCTCCGT CGCTGCGACGGCGGAAGCGCGCACCAATCTCGCTGATCTGGTGCGGGACACGCTGAACCTCACCGGCACCCACATTGGCT GCGAGCATGGGGTGTGCGGCGCCTGCACCATCCTGGTGGACGGCGAGCCGGCCCGCGCCTGCATCTCGTTTGCCGCCGCC TGCCAGGGCGCGGACGTGGTCACCATCGAGGGGCTCGACGATGACGCGGTGACCGCAGAGCTGCGCGCCGCCTTCAATCG TGAGCACGCCCTGCAATGCGGTTTCTGCACGCCGGGCATGCTGGTCTCGGCCCGCGACCTGGTGCTGCGCCTGCCGGAAG CGGACGAGGCGCGCATCCGCCTCGGTCTTGCGGGCAACCTGTGCCGCTGCACGGGTTATGCCGGCATCGTCAAGGCGGTG GCCTCGGTCATCGCCGCGCGGCGGGCGCAGGGCATCGGCCCGCTTACGGCCGAACGGCGGCTCGGGCCGGTGGGCGCGCG GGCCGGCGGGGCGACGGCAATCGCCGTTCCACTGGCGAACGTGGCCGCCCTCGCAGCGCCGGCTGCGGAACCACTCGCCC TCGGCGAAACCTTCATCCCCGCCAACAGCTTCGATCAGGGCTTTGAGGTACCGTTCCCGCCCGCCGACGTTTTCGCCTTC TTCGGCAGGATCGAGGACGTGGCGGCCTGCCTGCCCGGCGCGGTCATCGACGCCATGCCGTCCGCCGATCTGGTGGAGGG CGGCATGCGGGTGAAGCTCGGCCCCATCGGCACCACCTTCCGCGGCACCGCCCGCATCCGCCGCGACGAGGCCACCTCCA GCGGCACCATCCACGGCGCCGGAGGGGACGGCCGCTCGCGCACCGAGGGCGAGATCCGCTATCGCGTCCTGCCCGGCACG ACCCCCGGCTCGGCCTGCGTGGCGCTCAGCGTGGGCTACACGCTGAAAGGCCCGCTCGCCCAGTTCGGCCGGCCGGGCCT CGTGCGCGAGGTGGCGGGCCGGCTCATCGCCGATTTCGCCGCAAATCTTGAGGCCCGCCTTTCCGGCGCGCCGGCGCCGG CGGCGACAGGCCCCGGCCTCAACCCGCTCAAGCTGCTGACAGCCCTGATTTCCCAAAAGCTCGGCGCCCTGTGGCACCGC ATCCGCCCCGCTTCCTGA
Upstream 100 bases:
>100_bases CCGGCATGGACGATGCGGTCGACCGCCACGTGCATGTGGAGGTGCTGCGCCGCGCCGCTGCGCAGGCGGCGAACCTCTTC ACCGAGACGCGGAGCGCCGC
Downstream 100 bases:
>100_bases CCCTGACTGCCCAATGAGACTGGAGACCATCATGATGATTTCGCGCAGGACGACACTCGCGGCCCTCGCCTTCAGCCTCC TCGCCGGCACGGCGATGGCC
Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein
Products: NA
Alternate protein names: CO dehydrogenase subunit S; CO-DH S [H]
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MNALPRPEGTALGASPMITLTLNGRSVAATAEARTNLADLVRDTLNLTGTHIGCEHGVCGACTILVDGEPARACISFAAA CQGADVVTIEGLDDDAVTAELRAAFNREHALQCGFCTPGMLVSARDLVLRLPEADEARIRLGLAGNLCRCTGYAGIVKAV ASVIAARRAQGIGPLTAERRLGPVGARAGGATAIAVPLANVAALAAPAAEPLALGETFIPANSFDQGFEVPFPPADVFAF FGRIEDVAACLPGAVIDAMPSADLVEGGMRVKLGPIGTTFRGTARIRRDEATSSGTIHGAGGDGRSRTEGEIRYRVLPGT TPGSACVALSVGYTLKGPLAQFGRPGLVREVAGRLIADFAANLEARLSGAPAPAATGPGLNPLKLLTALISQKLGALWHR IRPAS
Sequences:
>Translated_405_residues MNALPRPEGTALGASPMITLTLNGRSVAATAEARTNLADLVRDTLNLTGTHIGCEHGVCGACTILVDGEPARACISFAAA CQGADVVTIEGLDDDAVTAELRAAFNREHALQCGFCTPGMLVSARDLVLRLPEADEARIRLGLAGNLCRCTGYAGIVKAV ASVIAARRAQGIGPLTAERRLGPVGARAGGATAIAVPLANVAALAAPAAEPLALGETFIPANSFDQGFEVPFPPADVFAF FGRIEDVAACLPGAVIDAMPSADLVEGGMRVKLGPIGTTFRGTARIRRDEATSSGTIHGAGGDGRSRTEGEIRYRVLPGT TPGSACVALSVGYTLKGPLAQFGRPGLVREVAGRLIADFAANLEARLSGAPAPAATGPGLNPLKLLTALISQKLGALWHR IRPAS >Mature_405_residues MNALPRPEGTALGASPMITLTLNGRSVAATAEARTNLADLVRDTLNLTGTHIGCEHGVCGACTILVDGEPARACISFAAA CQGADVVTIEGLDDDAVTAELRAAFNREHALQCGFCTPGMLVSARDLVLRLPEADEARIRLGLAGNLCRCTGYAGIVKAV ASVIAARRAQGIGPLTAERRLGPVGARAGGATAIAVPLANVAALAAPAAEPLALGETFIPANSFDQGFEVPFPPADVFAF FGRIEDVAACLPGAVIDAMPSADLVEGGMRVKLGPIGTTFRGTARIRRDEATSSGTIHGAGGDGRSRTEGEIRYRVLPGT TPGSACVALSVGYTLKGPLAQFGRPGLVREVAGRLIADFAANLEARLSGAPAPAATGPGLNPLKLLTALISQKLGALWHR IRPAS
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI71773480, Length=91, Percent_Identity=39.5604395604396, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI91823271, Length=150, Percent_Identity=34, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1786480, Length=158, Percent_Identity=37.3417721518987, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI1789232, Length=145, Percent_Identity=39.3103448275862, Blast_Score=97, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17540638, Length=156, Percent_Identity=37.8205128205128, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17539860, Length=156, Percent_Identity=34.6153846153846, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI32566215, Length=156, Percent_Identity=35.2564102564103, Blast_Score=95, Evalue=8e-20, Organism=Drosophila melanogaster, GI17737937, Length=161, Percent_Identity=29.1925465838509, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24647199, Length=136, Percent_Identity=31.6176470588235, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24647201, Length=163, Percent_Identity=30.0613496932515, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24647197, Length=160, Percent_Identity=28.75, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24647195, Length=160, Percent_Identity=28.75, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647193, Length=158, Percent_Identity=29.746835443038, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 41406; Mature: 41406
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALPRPEGTALGASPMITLTLNGRSVAATAEARTNLADLVRDTLNLTGTHIGCEHGVCG CCCCCCCCCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHCCCCEECCCCCCCE ACTILVDGEPARACISFAAACQGADVVTIEGLDDDAVTAELRAAFNREHALQCGFCTPGM EEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEECCCCCCH LVSARDLVLRLPEADEARIRLGLAGNLCRCTGYAGIVKAVASVIAARRAQGIGPLTAERR HEECCHHEEECCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHC LGPVGARAGGATAIAVPLANVAALAAPAAEPLALGETFIPANSFDQGFEVPFPPADVFAF CCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHCCCEECCCCCCCCCCCCCCCHHHHHHH FGRIEDVAACLPGAVIDAMPSADLVEGGMRVKLGPIGTTFRGTARIRRDEATSSGTIHGA HHHHHHHHHHCCCHHHHCCCCHHHHCCCCEEEECCCCCCCCCCCEEECCCCCCCCEEECC GGDGRSRTEGEIRYRVLPGTTPGSACVALSVGYTLKGPLAQFGRPGLVREVAGRLIADFA CCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCEECCCHHHHCCCCHHHHHHHHHHHHHH ANLEARLSGAPAPAATGPGLNPLKLLTALISQKLGALWHRIRPAS HCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNALPRPEGTALGASPMITLTLNGRSVAATAEARTNLADLVRDTLNLTGTHIGCEHGVCG CCCCCCCCCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHHHCCCCEECCCCCCCE ACTILVDGEPARACISFAAACQGADVVTIEGLDDDAVTAELRAAFNREHALQCGFCTPGM EEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEECCCCCCH LVSARDLVLRLPEADEARIRLGLAGNLCRCTGYAGIVKAVASVIAARRAQGIGPLTAERR HEECCHHEEECCCCCCCEEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHC LGPVGARAGGATAIAVPLANVAALAAPAAEPLALGETFIPANSFDQGFEVPFPPADVFAF CCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHCCCEECCCCCCCCCCCCCCCHHHHHHH FGRIEDVAACLPGAVIDAMPSADLVEGGMRVKLGPIGTTFRGTARIRRDEATSSGTIHGA HHHHHHHHHHCCCHHHHCCCCHHHHCCCCEEEECCCCCCCCCCCEEECCCCCCCCEEECC GGDGRSRTEGEIRYRVLPGTTPGSACVALSVGYTLKGPLAQFGRPGLVREVAGRLIADFA CCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCEECCCHHHHCCCCHHHHHHHHHHHHHH ANLEARLSGAPAPAATGPGLNPLKLLTALISQKLGALWHRIRPAS HCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]