Definition Xanthobacter autotrophicus Py2 chromosome, complete genome.
Accession NC_009720
Length 5,308,934

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The map label for this gene is 154244429

Identifier: 154244429

GI number: 154244429

Start: 516437

End: 517564

Strand: Direct

Name: 154244429

Synonym: Xaut_0472

Alternate gene names: NA

Gene position: 516437-517564 (Clockwise)

Preceding gene: 154244425

Following gene: 154244431

Centisome position: 9.73

GC content: 70.48

Gene sequence:

>1128_bases
ATGACCGTGCGAGCGACGGAGCACCAGAAGCCCGGCATTCTGCCCGCCGAGGCCATTTCGGCGCTGAAGGCGACGGGCGC
CATCTCCTGCCGCCGGCCGCTCGATGCGGACCAGATCCAGCCGGCGAGCCTGGACCTGCGCCTCGGCCGCACGGCGTGGC
GGGTGCGCGCAAGCTTCCTGCCGGGGGCCGGCGTCTCGGTGAAGGAGCGCCTCGCCGACCTCGCCCTGCACGATTTCGAC
CTCGCCAAGGGCGCGGTGCTGGAGACCGGCTGCGTCTATCTGGTGGAATTGTTCGAGCGCCTGAAGCTGCCCTTTGATCT
GGCGGCGGCGGCGAACCCCAAGAGCTCCACTGGGCGGCTCGACGTGTTCGTGCGCGTCATCACCGACGGCGCGCGGGCCT
TCGACACCATTCCCGCCGGCTACAACGGCCCGCTCTATCTGGAAATCTCTCCGCGCACCTTCCCCATCCTGGTGCGCACC
GGCTCGCGCCTGTCGCAGGTGCGCTTCCGTCGCGGCGTGTCGCGGCTGTCGGATCTCGAATTGCTGAGCCTGCAATCCGC
CGAATGCCTGGTGGATGCCCCCCAGCCGGACGTGGCGGCGGGCGGCATCGCGCTGGGCGTCGATCTCGCCGGCGAGGTGA
TCCCCGGCCTGCAGGGCTTCCGCGCGAAGAAGCATACCGGCGTCATCGACGTGGACGAGGCCGGCGTGCTCGACGTGGAG
GATTTCTGGGAGCCCATCCGGCTGCGGCCGGGCCGCACGGCGGGGCTGGTGCTGGACCCCGACGCCTTCTACATCCTCGC
CTCGCGGGAGGCGGTGCACGTGCCGCCGGACTATGCGGCGGAGATGGTGCCGTTCGATCCCCTGGTGGGCGAGTTCCGGG
TGCACTATGCCGGCTTCTTCGATCCCGGCTTCGGCAATCCGGCGGCCGGCGGGCGCGGCGCCCGCGCGGTGCTGGAGGTG
CGCTCGCGGGAGGTGCCCTTCATTCTGGAGCATGGCCAGACCGTGGGACGCCTCGTCTATGAGCGCATGGCGGGCCGCCC
CGGCACGCTCTACGGCGCCGACATGCGTTCCCACTACCAGGGGCAGGGGCTGAAGCTCTCCAAGCATTTCAAGCCCGTGG
GGAGCTGA

Upstream 100 bases:

>100_bases
GCTCAAATTCACCACGAGTGAGCGGCAGTAAACGCCCGGCCTCCCCTTGGCGTCAAGGGTTTCGTCCGGTAAAGCGAACA
AAAAGGACGGGAAAGCGGAT

Downstream 100 bases:

>100_bases
GCGCCAGCGGCGCCTCACCCCTTGCCGATGGTCGAGGTGGCGGCCGCGCGGCCGGCGGCGATCATCTCCTCCTTGCGCCA
CGGCACGGCGTCGTTGAGCG

Product: 2'-deoxycytidine 5'-triphosphate deaminase

Products: dUTP; NH3

Alternate protein names: 2-Deoxycytidine 5-Triphosphate Deaminase; 2-Deoxycytidine 5'-Triphosphate Deaminase Superfamily; 2`-Deoxycytidine 5`-Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MTVRATEHQKPGILPAEAISALKATGAISCRRPLDADQIQPASLDLRLGRTAWRVRASFLPGAGVSVKERLADLALHDFD
LAKGAVLETGCVYLVELFERLKLPFDLAAAANPKSSTGRLDVFVRVITDGARAFDTIPAGYNGPLYLEISPRTFPILVRT
GSRLSQVRFRRGVSRLSDLELLSLQSAECLVDAPQPDVAAGGIALGVDLAGEVIPGLQGFRAKKHTGVIDVDEAGVLDVE
DFWEPIRLRPGRTAGLVLDPDAFYILASREAVHVPPDYAAEMVPFDPLVGEFRVHYAGFFDPGFGNPAAGGRGARAVLEV
RSREVPFILEHGQTVGRLVYERMAGRPGTLYGADMRSHYQGQGLKLSKHFKPVGS

Sequences:

>Translated_375_residues
MTVRATEHQKPGILPAEAISALKATGAISCRRPLDADQIQPASLDLRLGRTAWRVRASFLPGAGVSVKERLADLALHDFD
LAKGAVLETGCVYLVELFERLKLPFDLAAAANPKSSTGRLDVFVRVITDGARAFDTIPAGYNGPLYLEISPRTFPILVRT
GSRLSQVRFRRGVSRLSDLELLSLQSAECLVDAPQPDVAAGGIALGVDLAGEVIPGLQGFRAKKHTGVIDVDEAGVLDVE
DFWEPIRLRPGRTAGLVLDPDAFYILASREAVHVPPDYAAEMVPFDPLVGEFRVHYAGFFDPGFGNPAAGGRGARAVLEV
RSREVPFILEHGQTVGRLVYERMAGRPGTLYGADMRSHYQGQGLKLSKHFKPVGS
>Mature_374_residues
TVRATEHQKPGILPAEAISALKATGAISCRRPLDADQIQPASLDLRLGRTAWRVRASFLPGAGVSVKERLADLALHDFDL
AKGAVLETGCVYLVELFERLKLPFDLAAAANPKSSTGRLDVFVRVITDGARAFDTIPAGYNGPLYLEISPRTFPILVRTG
SRLSQVRFRRGVSRLSDLELLSLQSAECLVDAPQPDVAAGGIALGVDLAGEVIPGLQGFRAKKHTGVIDVDEAGVLDVED
FWEPIRLRPGRTAGLVLDPDAFYILASREAVHVPPDYAAEMVPFDPLVGEFRVHYAGFFDPGFGNPAAGGRGARAVLEVR
SREVPFILEHGQTVGRLVYERMAGRPGTLYGADMRSHYQGQGLKLSKHFKPVGS

Specific function: Unknown

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.4.13

Molecular weight: Translated: 40513; Mature: 40382

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRATEHQKPGILPAEAISALKATGAISCRRPLDADQIQPASLDLRLGRTAWRVRASFL
CCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEECCCEEEEEEECC
PGAGVSVKERLADLALHDFDLAKGAVLETGCVYLVELFERLKLPFDLAAAANPKSSTGRL
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCE
DVFVRVITDGARAFDTIPAGYNGPLYLEISPRTFPILVRTGSRLSQVRFRRGVSRLSDLE
EEEEEEECCCCHHHHCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCCCH
LLSLQSAECLVDAPQPDVAAGGIALGVDLAGEVIPGLQGFRAKKHTGVIDVDEAGVLDVE
HEECCCCCEEEECCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEHH
DFWEPIRLRPGRTAGLVLDPDAFYILASREAVHVPPDYAAEMVPFDPLVGEFRVHYAGFF
HHCCHHCCCCCCCCCEEECCCEEEEEECCCEEECCCCHHHHCCCCCCCCCCEEEEEEEEE
DPGFGNPAAGGRGARAVLEVRSREVPFILEHGQTVGRLVYERMAGRPGTLYGADMRSHYQ
CCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCEEECCHHHHHC
GQGLKLSKHFKPVGS
CCCEEEHHCCCCCCC
>Mature Secondary Structure 
TVRATEHQKPGILPAEAISALKATGAISCRRPLDADQIQPASLDLRLGRTAWRVRASFL
CCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEECCCEEEEEEECC
PGAGVSVKERLADLALHDFDLAKGAVLETGCVYLVELFERLKLPFDLAAAANPKSSTGRL
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCE
DVFVRVITDGARAFDTIPAGYNGPLYLEISPRTFPILVRTGSRLSQVRFRRGVSRLSDLE
EEEEEEECCCCHHHHCCCCCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHCCCH
LLSLQSAECLVDAPQPDVAAGGIALGVDLAGEVIPGLQGFRAKKHTGVIDVDEAGVLDVE
HEECCCCCEEEECCCCCCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCEEEECCCCEEEHH
DFWEPIRLRPGRTAGLVLDPDAFYILASREAVHVPPDYAAEMVPFDPLVGEFRVHYAGFF
HHCCHHCCCCCCCCCEEECCCEEEEEECCCEEECCCCHHHHCCCCCCCCCCEEEEEEEEE
DPGFGNPAAGGRGARAVLEVRSREVPFILEHGQTVGRLVYERMAGRPGTLYGADMRSHYQ
CCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCEEECCHHHHHC
GQGLKLSKHFKPVGS
CCCEEEHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: dCTP; H2O

Specific reaction: dCTP + H2O = dUTP + NH3

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA