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The map label for this gene is yhcM [H]

Identifier: 154244431

GI number: 154244431

Start: 520027

End: 521214

Strand: Direct

Name: yhcM [H]

Synonym: Xaut_0474

Alternate gene names: 154244431

Gene position: 520027-521214 (Clockwise)

Preceding gene: 154244429

Following gene: 154244432

Centisome position: 9.8

GC content: 67.93

Gene sequence:

>1188_bases
ATGACAGCGGAAACGAAGGCGCGGGTACGGGAGTTGTATGCGGCGAAGCTGGCCGCGGGCGATATTTCGGACGATCCGGC
GCAGGCCATGGTGGTGCAGGAATTCGCCCGCCTGGAGCTGGAGCTGCGCGAGCGGGCCATGGCGCAGAAGTCTTCGGCGC
TGGGCTGGCTGTTCCAGCGCCGCGCCCCGGTGACGCCCAAGGGCATGTATGTCTACGGCAAGGTCGGCCGTGGCAAGACC
ATGCTCATGGACCTCTTCTTCGACGCCCTGCCGCCCCGGGCCAAAAGGCGGGCCCATTTCCACGAATTCATGGGCGACGT
GCACGAGCGCATCTTCCGCGAGCGCCAGGCCCAGAAGCAGGGCGACCGCAAGGTGGGCGATCCCATCATCGCGGTGGCGG
CGGCGCTGGCCGACGAGGCGAAGATCCTGTGCTTCGACGAATTCCACGTCACCGACATCGCCGATGCCATGATCCTCGGC
CGGCTGTTCGAGAAGCTGTTCGCCGACGGCGTGGTGGTGGTGGCCACCTCCAACGTGGCGCCGCAGGACCTGTATTCCGG
CGGCCTCAACCGCGCGCTGTTCCTGCCGTTCATCGGCATGATCGAGGAGCGCATGCAGGTGATGACGCTGGATTCGCGCA
CCGACTACCGCATGGAGAAGCTGGAAGGGGTGTCCACCTGGTACACGCCCCTCGGACCGGTGGCGGATGGAGCGGTGGCG
CAGGCCTGGCGCCGGCTCGCCGGTCCTGGCGGCGGCGTGCCCGGCGAGATCCTGTTGAAGGGCCGGCGCGTCGCCATCCC
GGCCATGGCCAACGGCGCGGCGCGCTTCACCTTCGCCAACCTGTGCGAGGCGGCGCTGGGCCCCAACCCCGATTACCTGC
GCCTCGCGCGCATGTTCCACACCGTCGTGCTGGAGCACATCCCCATCCTGGGACCGGACCAGCGCAACGAGGCCAAGCGC
TTCATCTCGCTGATCGACACGCTGTACGATTCCAACGTGAAGCTCATCGCCTCGGCGGCGGCGGAGCCAGATGCGCTTTA
TCTCGGCACCGAGGGGGCTGAGGCGTTCGAGTTCGCGCGCACGGTGTCGCGCATCCACGAGATGCGCTCGGGCGAATATC
TGGCGAAGCCCCACGGCCGCCCGGATTCGGCCGCGTCGGGGGACACCACGGGCCTGGTGGAAACCTGA

Upstream 100 bases:

>100_bases
CGGCATGCATTCAACTTTTCCCGCATCTGCTCTATAGCCAGCCCTGCCTTCGGCGAAGCACGGCGCCGAGACTTCCTTGC
GGCGAACGGGAATGGGCTCA

Downstream 100 bases:

>100_bases
AGCCACGTGGCCCGCCGCGCGGGCTGGTACCCAGCGCTTTTGAATGGGCGCATTGACGCAATTTTGCCGTGCGGGTAAAG
GATTTATTTACCTCCGGGAG

Product: AFG1 family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MTAETKARVRELYAAKLAAGDISDDPAQAMVVQEFARLELELRERAMAQKSSALGWLFQRRAPVTPKGMYVYGKVGRGKT
MLMDLFFDALPPRAKRRAHFHEFMGDVHERIFRERQAQKQGDRKVGDPIIAVAAALADEAKILCFDEFHVTDIADAMILG
RLFEKLFADGVVVVATSNVAPQDLYSGGLNRALFLPFIGMIEERMQVMTLDSRTDYRMEKLEGVSTWYTPLGPVADGAVA
QAWRRLAGPGGGVPGEILLKGRRVAIPAMANGAARFTFANLCEAALGPNPDYLRLARMFHTVVLEHIPILGPDQRNEAKR
FISLIDTLYDSNVKLIASAAAEPDALYLGTEGAEAFEFARTVSRIHEMRSGEYLAKPHGRPDSAASGDTTGLVET

Sequences:

>Translated_395_residues
MTAETKARVRELYAAKLAAGDISDDPAQAMVVQEFARLELELRERAMAQKSSALGWLFQRRAPVTPKGMYVYGKVGRGKT
MLMDLFFDALPPRAKRRAHFHEFMGDVHERIFRERQAQKQGDRKVGDPIIAVAAALADEAKILCFDEFHVTDIADAMILG
RLFEKLFADGVVVVATSNVAPQDLYSGGLNRALFLPFIGMIEERMQVMTLDSRTDYRMEKLEGVSTWYTPLGPVADGAVA
QAWRRLAGPGGGVPGEILLKGRRVAIPAMANGAARFTFANLCEAALGPNPDYLRLARMFHTVVLEHIPILGPDQRNEAKR
FISLIDTLYDSNVKLIASAAAEPDALYLGTEGAEAFEFARTVSRIHEMRSGEYLAKPHGRPDSAASGDTTGLVET
>Mature_394_residues
TAETKARVRELYAAKLAAGDISDDPAQAMVVQEFARLELELRERAMAQKSSALGWLFQRRAPVTPKGMYVYGKVGRGKTM
LMDLFFDALPPRAKRRAHFHEFMGDVHERIFRERQAQKQGDRKVGDPIIAVAAALADEAKILCFDEFHVTDIADAMILGR
LFEKLFADGVVVVATSNVAPQDLYSGGLNRALFLPFIGMIEERMQVMTLDSRTDYRMEKLEGVSTWYTPLGPVADGAVAQ
AWRRLAGPGGGVPGEILLKGRRVAIPAMANGAARFTFANLCEAALGPNPDYLRLARMFHTVVLEHIPILGPDQRNEAKRF
ISLIDTLYDSNVKLIASAAAEPDALYLGTEGAEAFEFARTVSRIHEMRSGEYLAKPHGRPDSAASGDTTGLVET

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=401, Percent_Identity=38.4039900249377, Blast_Score=249, Evalue=3e-66,
Organism=Escherichia coli, GI1789627, Length=319, Percent_Identity=40.4388714733542, Blast_Score=234, Evalue=6e-63,
Organism=Caenorhabditis elegans, GI17505769, Length=424, Percent_Identity=36.7924528301887, Blast_Score=253, Evalue=2e-67,
Organism=Saccharomyces cerevisiae, GI6320783, Length=390, Percent_Identity=33.3333333333333, Blast_Score=192, Evalue=7e-50,
Organism=Drosophila melanogaster, GI20129913, Length=346, Percent_Identity=37.8612716763006, Blast_Score=226, Evalue=1e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 43456; Mature: 43324

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAETKARVRELYAAKLAAGDISDDPAQAMVVQEFARLELELRERAMAQKSSALGWLFQR
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RAPVTPKGMYVYGKVGRGKTMLMDLFFDALPPRAKRRAHFHEFMGDVHERIFRERQAQKQ
CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDRKVGDPIIAVAAALADEAKILCFDEFHVTDIADAMILGRLFEKLFADGVVVVATSNVA
CCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC
PQDLYSGGLNRALFLPFIGMIEERMQVMTLDSRTDYRMEKLEGVSTWYTPLGPVADGAVA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHCCCCCCCCCCHHH
QAWRRLAGPGGGVPGEILLKGRRVAIPAMANGAARFTFANLCEAALGPNPDYLRLARMFH
HHHHHHCCCCCCCCHHHEECCCEEEECHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
TVVLEHIPILGPDQRNEAKRFISLIDTLYDSNVKLIASAAAEPDALYLGTEGAEAFEFAR
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCHHHHHHHH
TVSRIHEMRSGEYLAKPHGRPDSAASGDTTGLVET
HHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAETKARVRELYAAKLAAGDISDDPAQAMVVQEFARLELELRERAMAQKSSALGWLFQR
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RAPVTPKGMYVYGKVGRGKTMLMDLFFDALPPRAKRRAHFHEFMGDVHERIFRERQAQKQ
CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GDRKVGDPIIAVAAALADEAKILCFDEFHVTDIADAMILGRLFEKLFADGVVVVATSNVA
CCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCC
PQDLYSGGLNRALFLPFIGMIEERMQVMTLDSRTDYRMEKLEGVSTWYTPLGPVADGAVA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHCCCCCCCCCCHHH
QAWRRLAGPGGGVPGEILLKGRRVAIPAMANGAARFTFANLCEAALGPNPDYLRLARMFH
HHHHHHCCCCCCCCHHHEECCCEEEECHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
TVVLEHIPILGPDQRNEAKRFISLIDTLYDSNVKLIASAAAEPDALYLGTEGAEAFEFAR
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCHHHHHHHH
TVSRIHEMRSGEYLAKPHGRPDSAASGDTTGLVET
HHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]