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The map label for this gene is 153952328

Identifier: 153952328

GI number: 153952328

Start: 1127232

End: 1128986

Strand: Direct

Name: 153952328

Synonym: JJD26997_1279

Alternate gene names: NA

Gene position: 1127232-1128986 (Clockwise)

Preceding gene: 153952126

Following gene: 153952115

Centisome position: 61.09

GC content: 27.64

Gene sequence:

>1755_bases
ATGTTTGATAAAATTCATTATTATTATTTTAATGCTGATTATGAAAAATGTTTAAACTTAAGCGAACAATTTTTAAAAGA
AAGTTCAAAATTTGCTTTAGAATTTGCCATGCTTTCTTCTTATAAACTTTCTCTTTTTCAAAAAGCCTTATATTATGCCG
AGGAGCTTTTTTCTTTAAATCCTACAAGTTTTAATGGTCTTATGCTTGCTAAAGGCTATATTGAAAATTTAAGACTTGAT
GAAGCCTTGAATTTATTACAAACACTTTTAACTCGCAAAGACGATTTAGAAGATGAACTTAAGTTAGAATTGGCTTTTGC
CTATAAACTGAGCAATAAACTAGAAGAATCTGAAAAAATTTTCAAAGAATTGCTTTCTAAAGATATGTATAATTTTAATC
TATGGAAAAATTATGCAGAAATTTATTTCAGACATGATTGTGCTAAGGCATTAGATGCGCATGAACACTTGTGTCATTTC
ATGCAAGATTTGATTGATAAACTACAAAAAGGAATCCTTGTAGAACAAACCCATCTTAATTTAGTTAAACTTGAAGATAG
ACTTCACAGTAAAACCAAAGAAAATCTTACTATTTCTAAAATAGAAGATTTCTTAATCCATCAAATTTTACCCCAAAAGG
CATACTTGCTTTTTAAGCTTTTTAGAATATCTGATTCTTTAGAACTTTTTCAATCACTACAAGAAGCCAATCAACACCAT
GCGCAGTTTTGGCAAAACTATGCTAAGGTATTAGAATTTAACTCAAACTATCAAGAGGCTTATCATGCTTATAAAAAATG
TCTCAGTTTAGATTCTCATGCAACTTATCAATTTGATTTAGCTTATCTTTTGATGCGTATGGGAGTAGATGATAATTTTG
AAGAGGGTAAGAAGTATTATGAAAGCAGGTTGTTTTATGCTCATAATGAAACTTTTTCTCCTTATCATTATAATGAAAGC
CTAAAGGCTTTTAATAAATTGGGCATTGATGCTTTTAAAGATAAAGAAGTTTTAGTATTTTGCGAGCAAGGCTTTGGTGA
TACTATCATGTATGCAAGATGCTTAGAAAAACTTTGTAAAATCACTTCAAAGGTTTTATTTGCTCCCCAAAGTGCTATGT
ATAAAATGTTTAAAAATCAAATCAAATTTTTAAATCAAAAGGATGATATTTTTAAAAATTTAAAGGTTTTAAAAAATCTA
CCTATGCATTTTGATTATGCTATTCCTATTTGCTCTTTGCCTTTTTTTATTGATATTAAACTGGATGAGATTTCAAGGTT
AAAAACACCTATATTAGCACAGAAAAAACCGCATAATAAAAGAAAAAAACTGGGTATTTTTTATGCTACTCCTAATGCTG
AAAATTCTAATTTATCAAGAAATGTAAAATTTGAATTTTTATTGGATATATTAAAAGATTTAGATTATGAAATCATTTCT
TTTCAAATGCAATTAAAAGAAGAATTGCCTAAGATAATAGAAGATAGGAGCAAGCTTATAACAAATTGGAATGATACGCT
AAATTATTTACATGATATTGACTGTATGCTTAGTATTGATAGTGCTATAGCGCATTTAAGTTTAGCTATGGATATTCCTA
CTATAGTTCTTTTGTATCCTAAGTTTGATTGGCGTTGGGGGAAATTTGAAAATCCTAAAAGTTATTTTTGGCCAAAAGCA
AAATGTTTTATCATAAAAGAACAAGAAGAAACAAAAAAGAATTTGCAAAAACTGATTAAAGATATTTTAAACTAA

Upstream 100 bases:

>100_bases
TGTTTTCATTGTATTTGTTTTTATGAATATTTTGTATAATTATCTTTTTATGCAACTTATAAGATAATATCAGATTGTAA
TTTGACTATCTAGGAAGATC

Downstream 100 bases:

>100_bases
AGCTTATTTTAAGAGCTTTAGGTGGAAAATTTGGTTTTGGATTTATAAAAATTAAAAAATTGATTTTTAAACGAATCAAG
GTATAATTTCAAAGTTAAAA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Exostosin Family Protein; Tetratricopeptide Tpr_2 Repeat Protein; Sulfotransferase; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:

>584_residues
MFDKIHYYYFNADYEKCLNLSEQFLKESSKFALEFAMLSSYKLSLFQKALYYAEELFSLNPTSFNGLMLAKGYIENLRLD
EALNLLQTLLTRKDDLEDELKLELAFAYKLSNKLEESEKIFKELLSKDMYNFNLWKNYAEIYFRHDCAKALDAHEHLCHF
MQDLIDKLQKGILVEQTHLNLVKLEDRLHSKTKENLTISKIEDFLIHQILPQKAYLLFKLFRISDSLELFQSLQEANQHH
AQFWQNYAKVLEFNSNYQEAYHAYKKCLSLDSHATYQFDLAYLLMRMGVDDNFEEGKKYYESRLFYAHNETFSPYHYNES
LKAFNKLGIDAFKDKEVLVFCEQGFGDTIMYARCLEKLCKITSKVLFAPQSAMYKMFKNQIKFLNQKDDIFKNLKVLKNL
PMHFDYAIPICSLPFFIDIKLDEISRLKTPILAQKKPHNKRKKLGIFYATPNAENSNLSRNVKFEFLLDILKDLDYEIIS
FQMQLKEELPKIIEDRSKLITNWNDTLNYLHDIDCMLSIDSAIAHLSLAMDIPTIVLLYPKFDWRWGKFENPKSYFWPKA
KCFIIKEQEETKKNLQKLIKDILN

Sequences:

>Translated_584_residues
MFDKIHYYYFNADYEKCLNLSEQFLKESSKFALEFAMLSSYKLSLFQKALYYAEELFSLNPTSFNGLMLAKGYIENLRLD
EALNLLQTLLTRKDDLEDELKLELAFAYKLSNKLEESEKIFKELLSKDMYNFNLWKNYAEIYFRHDCAKALDAHEHLCHF
MQDLIDKLQKGILVEQTHLNLVKLEDRLHSKTKENLTISKIEDFLIHQILPQKAYLLFKLFRISDSLELFQSLQEANQHH
AQFWQNYAKVLEFNSNYQEAYHAYKKCLSLDSHATYQFDLAYLLMRMGVDDNFEEGKKYYESRLFYAHNETFSPYHYNES
LKAFNKLGIDAFKDKEVLVFCEQGFGDTIMYARCLEKLCKITSKVLFAPQSAMYKMFKNQIKFLNQKDDIFKNLKVLKNL
PMHFDYAIPICSLPFFIDIKLDEISRLKTPILAQKKPHNKRKKLGIFYATPNAENSNLSRNVKFEFLLDILKDLDYEIIS
FQMQLKEELPKIIEDRSKLITNWNDTLNYLHDIDCMLSIDSAIAHLSLAMDIPTIVLLYPKFDWRWGKFENPKSYFWPKA
KCFIIKEQEETKKNLQKLIKDILN
>Mature_584_residues
MFDKIHYYYFNADYEKCLNLSEQFLKESSKFALEFAMLSSYKLSLFQKALYYAEELFSLNPTSFNGLMLAKGYIENLRLD
EALNLLQTLLTRKDDLEDELKLELAFAYKLSNKLEESEKIFKELLSKDMYNFNLWKNYAEIYFRHDCAKALDAHEHLCHF
MQDLIDKLQKGILVEQTHLNLVKLEDRLHSKTKENLTISKIEDFLIHQILPQKAYLLFKLFRISDSLELFQSLQEANQHH
AQFWQNYAKVLEFNSNYQEAYHAYKKCLSLDSHATYQFDLAYLLMRMGVDDNFEEGKKYYESRLFYAHNETFSPYHYNES
LKAFNKLGIDAFKDKEVLVFCEQGFGDTIMYARCLEKLCKITSKVLFAPQSAMYKMFKNQIKFLNQKDDIFKNLKVLKNL
PMHFDYAIPICSLPFFIDIKLDEISRLKTPILAQKKPHNKRKKLGIFYATPNAENSNLSRNVKFEFLLDILKDLDYEIIS
FQMQLKEELPKIIEDRSKLITNWNDTLNYLHDIDCMLSIDSAIAHLSLAMDIPTIVLLYPKFDWRWGKFENPKSYFWPKA
KCFIIKEQEETKKNLQKLIKDILN

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69362; Mature: 69362

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDKIHYYYFNADYEKCLNLSEQFLKESSKFALEFAMLSSYKLSLFQKALYYAEELFSLN
CCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTSFNGLMLAKGYIENLRLDEALNLLQTLLTRKDDLEDELKLELAFAYKLSNKLEESEKI
CCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FKELLSKDMYNFNLWKNYAEIYFRHDCAKALDAHEHLCHFMQDLIDKLQKGILVEQTHLN
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCH
LVKLEDRLHSKTKENLTISKIEDFLIHQILPQKAYLLFKLFRISDSLELFQSLQEANQHH
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AQFWQNYAKVLEFNSNYQEAYHAYKKCLSLDSHATYQFDLAYLLMRMGVDDNFEEGKKYY
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
ESRLFYAHNETFSPYHYNESLKAFNKLGIDAFKDKEVLVFCEQGFGDTIMYARCLEKLCK
HHHEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
ITSKVLFAPQSAMYKMFKNQIKFLNQKDDIFKNLKVLKNLPMHFDYAIPICSLPFFIDIK
HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEECCCHHHCCCEEEEEE
LDEISRLKTPILAQKKPHNKRKKLGIFYATPNAENSNLSRNVKFEFLLDILKDLDYEIIS
HHHHHHHCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHH
FQMQLKEELPKIIEDRSKLITNWNDTLNYLHDIDCMLSIDSAIAHLSLAMDIPTIVLLYP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
KFDWRWGKFENPKSYFWPKAKCFIIKEQEETKKNLQKLIKDILN
CCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFDKIHYYYFNADYEKCLNLSEQFLKESSKFALEFAMLSSYKLSLFQKALYYAEELFSLN
CCCCEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PTSFNGLMLAKGYIENLRLDEALNLLQTLLTRKDDLEDELKLELAFAYKLSNKLEESEKI
CCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
FKELLSKDMYNFNLWKNYAEIYFRHDCAKALDAHEHLCHFMQDLIDKLQKGILVEQTHLN
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCH
LVKLEDRLHSKTKENLTISKIEDFLIHQILPQKAYLLFKLFRISDSLELFQSLQEANQHH
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AQFWQNYAKVLEFNSNYQEAYHAYKKCLSLDSHATYQFDLAYLLMRMGVDDNFEEGKKYY
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
ESRLFYAHNETFSPYHYNESLKAFNKLGIDAFKDKEVLVFCEQGFGDTIMYARCLEKLCK
HHHEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
ITSKVLFAPQSAMYKMFKNQIKFLNQKDDIFKNLKVLKNLPMHFDYAIPICSLPFFIDIK
HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEECCCHHHCCCEEEEEE
LDEISRLKTPILAQKKPHNKRKKLGIFYATPNAENSNLSRNVKFEFLLDILKDLDYEIIS
HHHHHHHCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCHHHHH
FQMQLKEELPKIIEDRSKLITNWNDTLNYLHDIDCMLSIDSAIAHLSLAMDIPTIVLLYP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
KFDWRWGKFENPKSYFWPKAKCFIIKEQEETKKNLQKLIKDILN
CCCCCCCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA