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The map label for this gene is glnT [H]

Identifier: 153936768

GI number: 153936768

Start: 1678839

End: 1680089

Strand: Direct

Name: glnT [H]

Synonym: CLC_1609

Alternate gene names: 153936768

Gene position: 1678839-1680089 (Clockwise)

Preceding gene: 153934573

Following gene: 153937498

Centisome position: 44.64

GC content: 27.18

Gene sequence:

>1251_bases
TTGCCCTTTATAATAATTGCAACTTTATATGTAAATTATAAAAGAAAAAAATTTTTTAATGTAATAAGCAAAAAAGATTC
TACTAAGATAGAATTTAATAAAGTAAAAAATGCTCTTTCAATTTCATTATCTTCAAAGATCGGTACAGGAGCTGTAATAG
GAGTATTAGCTGCCATGTGGAAAACTTCCCAAAATGGTATAGGTGGAGAGGCAGTAGTGCTTTGGGTTATTATTGGCATG
ATTTTACTCATTCCATTAACTTATTCAGAGGTTTTTTTTACTCAAGTGATAAATAAAACTCCAAGGAATTTTATAGAGCG
GTATATTAATAAAAAAGTTGCAGCTATTTATGCAGTATCCTTAGTTATATTGTATTCTTTTGGATTTACAGGATTTCAAA
TGACAGGGGTTCAGAGTGTAGTTAAAATTTTTGCTAAACAAAATTTCAACTATAACTTTACAACTAAAGGTAGATTAATT
TTTATAGTTATACCAATTATAGTTATAGTATCTTCTATAGTTTTAACCAAAAGCTATAAACTTTTTATTAATGTATTAGG
TTCTCTTGTTTCTTTATTAATTATTTTATATGCAGGGTTTTTTTTAGTATTTTTATTTATAACAAGGAGTTTTATACCAG
AGTATTTATCTATAATTTGGAGAGATTTTTTAAACTTTAGAGCTGCAGCTACAGGTATTCCTATAGGACTTATTGTGGGA
TTTCAAAGGATTATCCAAGTAAGTGAAACAGGATTAGGAACCAGTGCTTTAGCTAGTTCAGATATGATGAATTCTCCTAG
GAGAGAAGCTATGCTTCAGACCATTGCAACTATTATTACTATATGTAATGCAATTATAATAACATCCTATGTATTTACTT
ATGGAAGATACAATCTTAACGGAGTAGTTTTATCAGGAGATGGATTAGATAGAATTGCTAGTTATTTAAACAGTGCTTAT
GGAGTTACAGGCTTTTTAGGACAAAGTATAATAATTATGTTTTTTTTAACCTGTGGTTTTACTACAGTTTTAAGTTCCTA
TCATTTTATTAATACAATTATTTATTTTAATGAAAATAAGAAGATAGCATTTTATATATGCTTAGTAACAGCTTCTGGAA
TATTAAGTGTATCAAATTTTGATATGATTTTTGATGCAGTGGATTTATTGATGTTCATTGTAGCAACAATAAACATAACT
GCCCTTTGTATATTTGTATATAAGGATATACAAAATTATAAAATTAAGTAA

Upstream 100 bases:

>100_bases
CTACATTTGTATAAAAATAAATAGGGAAGGGGGGATAAGTATAATTAACATATTTGGAGAAGCAGTAAATTTTTTTAGTA
CAAATTTATGGAACATTTTT

Downstream 100 bases:

>100_bases
TCAATAAGTTTTATTTATAAATACAGCCATTATAAGGGGCTTAATACCTTGTACAATATATTTTAATGGAGGTATAAATT
ATGAGCAAAAAATATTTAAT

Product: sodium:alanine symporter family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MPFIIIATLYVNYKRKKFFNVISKKDSTKIEFNKVKNALSISLSSKIGTGAVIGVLAAMWKTSQNGIGGEAVVLWVIIGM
ILLIPLTYSEVFFTQVINKTPRNFIERYINKKVAAIYAVSLVILYSFGFTGFQMTGVQSVVKIFAKQNFNYNFTTKGRLI
FIVIPIIVIVSSIVLTKSYKLFINVLGSLVSLLIILYAGFFLVFLFITRSFIPEYLSIIWRDFLNFRAAATGIPIGLIVG
FQRIIQVSETGLGTSALASSDMMNSPRREAMLQTIATIITICNAIIITSYVFTYGRYNLNGVVLSGDGLDRIASYLNSAY
GVTGFLGQSIIIMFFLTCGFTTVLSSYHFINTIIYFNENKKIAFYICLVTASGILSVSNFDMIFDAVDLLMFIVATINIT
ALCIFVYKDIQNYKIK

Sequences:

>Translated_416_residues
MPFIIIATLYVNYKRKKFFNVISKKDSTKIEFNKVKNALSISLSSKIGTGAVIGVLAAMWKTSQNGIGGEAVVLWVIIGM
ILLIPLTYSEVFFTQVINKTPRNFIERYINKKVAAIYAVSLVILYSFGFTGFQMTGVQSVVKIFAKQNFNYNFTTKGRLI
FIVIPIIVIVSSIVLTKSYKLFINVLGSLVSLLIILYAGFFLVFLFITRSFIPEYLSIIWRDFLNFRAAATGIPIGLIVG
FQRIIQVSETGLGTSALASSDMMNSPRREAMLQTIATIITICNAIIITSYVFTYGRYNLNGVVLSGDGLDRIASYLNSAY
GVTGFLGQSIIIMFFLTCGFTTVLSSYHFINTIIYFNENKKIAFYICLVTASGILSVSNFDMIFDAVDLLMFIVATINIT
ALCIFVYKDIQNYKIK
>Mature_415_residues
PFIIIATLYVNYKRKKFFNVISKKDSTKIEFNKVKNALSISLSSKIGTGAVIGVLAAMWKTSQNGIGGEAVVLWVIIGMI
LLIPLTYSEVFFTQVINKTPRNFIERYINKKVAAIYAVSLVILYSFGFTGFQMTGVQSVVKIFAKQNFNYNFTTKGRLIF
IVIPIIVIVSSIVLTKSYKLFINVLGSLVSLLIILYAGFFLVFLFITRSFIPEYLSIIWRDFLNFRAAATGIPIGLIVGF
QRIIQVSETGLGTSALASSDMMNSPRREAMLQTIATIITICNAIIITSYVFTYGRYNLNGVVLSGDGLDRIASYLNSAYG
VTGFLGQSIIIMFFLTCGFTTVLSSYHFINTIIYFNENKKIAFYICLVTASGILSVSNFDMIFDAVDLLMFIVATINITA
LCIFVYKDIQNYKIK

Specific function: Probably functions as a sodium/glutamine symporter for glutamine uptake [H]

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 46424; Mature: 46293

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFIIIATLYVNYKRKKFFNVISKKDSTKIEFNKVKNALSISLSSKIGTGAVIGVLAAMW
CCEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHH
KTSQNGIGGEAVVLWVIIGMILLIPLTYSEVFFTQVINKTPRNFIERYINKKVAAIYAVS
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
LVILYSFGFTGFQMTGVQSVVKIFAKQNFNYNFTTKGRLIFIVIPIIVIVSSIVLTKSYK
HHHHHHCCCCCEEHHHHHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHH
LFINVLGSLVSLLIILYAGFFLVFLFITRSFIPEYLSIIWRDFLNFRAAATGIPIGLIVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
FQRIIQVSETGLGTSALASSDMMNSPRREAMLQTIATIITICNAIIITSYVFTYGRYNLN
HHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
GVVLSGDGLDRIASYLNSAYGVTGFLGQSIIIMFFLTCGFTTVLSSYHFINTIIYFNENK
EEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
KIAFYICLVTASGILSVSNFDMIFDAVDLLMFIVATINITALCIFVYKDIQNYKIK
EEEEEEEEEHHCCHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PFIIIATLYVNYKRKKFFNVISKKDSTKIEFNKVKNALSISLSSKIGTGAVIGVLAAMW
CEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHH
KTSQNGIGGEAVVLWVIIGMILLIPLTYSEVFFTQVINKTPRNFIERYINKKVAAIYAVS
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
LVILYSFGFTGFQMTGVQSVVKIFAKQNFNYNFTTKGRLIFIVIPIIVIVSSIVLTKSYK
HHHHHHCCCCCEEHHHHHHHHHHHHHCCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHH
LFINVLGSLVSLLIILYAGFFLVFLFITRSFIPEYLSIIWRDFLNFRAAATGIPIGLIVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
FQRIIQVSETGLGTSALASSDMMNSPRREAMLQTIATIITICNAIIITSYVFTYGRYNLN
HHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
GVVLSGDGLDRIASYLNSAYGVTGFLGQSIIIMFFLTCGFTTVLSSYHFINTIIYFNENK
EEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
KIAFYICLVTASGILSVSNFDMIFDAVDLLMFIVATINITALCIFVYKDIQNYKIK
EEEEEEEEEHHCCHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]