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The map label for this gene is yedE [H]

Identifier: 153934573

GI number: 153934573

Start: 1677127

End: 1677654

Strand: Direct

Name: yedE [H]

Synonym: CLC_1607

Alternate gene names: 153934573

Gene position: 1677127-1677654 (Clockwise)

Preceding gene: 153935597

Following gene: 153936768

Centisome position: 44.6

GC content: 29.73

Gene sequence:

>528_bases
ATGAAATGCATAAAGGATAGATTAAAAAAGCCCTGGCCTTATTGGATAGGTGGGATCTTGCTAGGTATTTTAAATGTAGC
TCTTTTAGTAATAACGGGGGTTGCGTGGCATGTCACTAGTGGGTTTTTGCTATGGGGTGCAGCAGTATTGGACTTTTTGG
GAGCTGAACCATTGAAGTGGGATTTTTTTAATATATTTAATGTACAATATAAGGAGATATTATTAAATCATAGTTTAATT
ATAAATAAATTTACTATTTTGAATATAGCAGTTATTATAGGATCTTTAATAGCAACTTTATTTGCTTCTCAATTTAACAT
AAAAAAAATCAAAAATAGAAAACAAGTAATTATTGCTTTAATAGGTGGTATAATCATGGGCTATGGAGCTAGGCTTGCCT
CTGGATGTAATATTGGTAGCTTTTTAATAGGTATATCATCTTTTTCTTTACATGGTTGGATATATTGGATTTTTATTACT
TTGGGAGCCTTTATAGGTACATTAATATTAAAGAAGTTTATATTATAA

Upstream 100 bases:

>100_bases
AGGAGTGGGCAAAACAAAATAACTATGAAATAAAAGTAATTGAAGTGGATAATGGTGAATGGGAAGTTTATATTCAAAAA
TAATAAAAAGGGGATAAAAT

Downstream 100 bases:

>100_bases
CATAGATAATATAAACTTCTTTAATATTTTTTAGCAGAATCCTCTTTTTCTAGATATTATAAAATCAACAAACATTTTTT
CGTATTTGGTAAATACATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MKCIKDRLKKPWPYWIGGILLGILNVALLVITGVAWHVTSGFLLWGAAVLDFLGAEPLKWDFFNIFNVQYKEILLNHSLI
INKFTILNIAVIIGSLIATLFASQFNIKKIKNRKQVIIALIGGIIMGYGARLASGCNIGSFLIGISSFSLHGWIYWIFIT
LGAFIGTLILKKFIL

Sequences:

>Translated_175_residues
MKCIKDRLKKPWPYWIGGILLGILNVALLVITGVAWHVTSGFLLWGAAVLDFLGAEPLKWDFFNIFNVQYKEILLNHSLI
INKFTILNIAVIIGSLIATLFASQFNIKKIKNRKQVIIALIGGIIMGYGARLASGCNIGSFLIGISSFSLHGWIYWIFIT
LGAFIGTLILKKFIL
>Mature_175_residues
MKCIKDRLKKPWPYWIGGILLGILNVALLVITGVAWHVTSGFLLWGAAVLDFLGAEPLKWDFFNIFNVQYKEILLNHSLI
INKFTILNIAVIIGSLIATLFASQFNIKKIKNRKQVIIALIGGIIMGYGARLASGCNIGSFLIGISSFSLHGWIYWIFIT
LGAFIGTLILKKFIL

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=149, Percent_Identity=33.5570469798658, Blast_Score=70, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 19496; Mature: 19496

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCIKDRLKKPWPYWIGGILLGILNVALLVITGVAWHVTSGFLLWGAAVLDFLGAEPLKW
CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DFFNIFNVQYKEILLNHSLIINKFTILNIAVIIGSLIATLFASQFNIKKIKNRKQVIIAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
IGGIIMGYGARLASGCNIGSFLIGISSFSLHGWIYWIFITLGAFIGTLILKKFIL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKCIKDRLKKPWPYWIGGILLGILNVALLVITGVAWHVTSGFLLWGAAVLDFLGAEPLKW
CCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DFFNIFNVQYKEILLNHSLIINKFTILNIAVIIGSLIATLFASQFNIKKIKNRKQVIIAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
IGGIIMGYGARLASGCNIGSFLIGISSFSLHGWIYWIFITLGAFIGTLILKKFIL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]