Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
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Accession | NC_009697 |
Length | 3,863,450 |
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The map label for this gene is 153931359
Identifier: 153931359
GI number: 153931359
Start: 2572849
End: 2573976
Strand: Reverse
Name: 153931359
Synonym: CLB_2446
Alternate gene names: NA
Gene position: 2573976-2572849 (Counterclockwise)
Preceding gene: 153932099
Following gene: 153933482
Centisome position: 66.62
GC content: 31.29
Gene sequence:
>1128_bases ATGAATAGATATCAATTAGAACAAATGTTAGCAGGAATAGGTCAGGATTTAAAAGCAGCAAATGAAAAATTAACCTCTAT GTATGCTGATGCAAAGACTACATTAGAAGCAAGAAATGAGCAAAAAAATAATGTTAAGGATTTAGAAGAAAGATTTGCAG GAATAAAAGCGCAAATAGAGGAAATGGACAGACAAGCGGAACAAAAATTTAAAAATAAAGTTATTACAGGTGGAAATGAA AAGGATAAAAAAATAAATGCTAAGGCTGAACTAATTAAAGCCACAATGTCTAATAATCCTGTTTCTATGGAAGTGAAAGC AGCTTTAGGAGATAATAATTCAACAGGTGGAGAAAAATTCTTACCTAAGACTATGCAAAATGAATTATTACATGAACCTT TTGTTAAAAACCCATTAAGAGATGTTTCCACATTTACTAATGAAACAAATTTAGAAGTACCTAAAATAACATTTACTTTG GATAATGACGATTTTATAGCAGATACTGAAACTGCAAAAGAATTAAAAGCTGATGGAGATACAGTACAGTTTGGTAGACA TAAATTTAAAGTATTTGCACCAGTTTCAGAGACTATTTTAAGAGGTACTAATACTAATATAGTACAAACTGTTGAGATGG CATTAGAAAGTGGTCTATCAGCAAAAGAAAAGAAAGTTGCGTTTACTACAACATCAAAAATAGGTGAAGAACATATGAGT TTTTACTCAACTAAAAATGCAATAAAAACAGTTGAAGGAGTAAATAAGTATAAAGCGATAAAGGCAGCTATAGCAGATCT TCATGAAGATTATAGAGAAAATGCAAAAATAATAATGAGATATGCTGATTATATGGATATAATTGAAATGCTTGCGAATG GTAATGCTACACTTTATGCAGCACAACCAGAGCAAATATTAGGAAAGCCGGCTATATTCTGTGATAGTGCAGTTGATCCA ATAGTAGGTGATATGAGATATTCACATTTTAACTATGATTTAGATATGCTTTATGAGAGGGACAAAGACGTAAAAACAGG TATGGAGTGCTTTGTTTTAACAGCATGGTTTGACCACCAAATTAAGTTAAAATCTGCATTCAGAATAGCCAAAACAACTA CTCCCTAG
Upstream 100 bases:
>100_bases AAACCTATAAAAAATACTGAAAAAATAGAAAAGGATGAAGAGATAGAGGCTCTTATAGCAAGGGTAAATAATATTTTAAA ATTTGAGGAGGAAAGAATAT
Downstream 100 bases:
>100_bases TGAACCCCCAAAAGAAACAATGGGGGAAGAAAATGCAGAACACATAACATATGGAAAAGAAGAATTAGAAGCTATGACAG TAGAGCAATTAAAATCTATA
Product: putative phage capsid protein
Products: NA
Alternate protein names: Phage Capsid Protein HK; Phage Related Protein; Phage Prohead Protease; Prophage; Bacteriophage Capsid Protein; Capsid Protein Hk
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MNRYQLEQMLAGIGQDLKAANEKLTSMYADAKTTLEARNEQKNNVKDLEERFAGIKAQIEEMDRQAEQKFKNKVITGGNE KDKKINAKAELIKATMSNNPVSMEVKAALGDNNSTGGEKFLPKTMQNELLHEPFVKNPLRDVSTFTNETNLEVPKITFTL DNDDFIADTETAKELKADGDTVQFGRHKFKVFAPVSETILRGTNTNIVQTVEMALESGLSAKEKKVAFTTTSKIGEEHMS FYSTKNAIKTVEGVNKYKAIKAAIADLHEDYRENAKIIMRYADYMDIIEMLANGNATLYAAQPEQILGKPAIFCDSAVDP IVGDMRYSHFNYDLDMLYERDKDVKTGMECFVLTAWFDHQIKLKSAFRIAKTTTP
Sequences:
>Translated_375_residues MNRYQLEQMLAGIGQDLKAANEKLTSMYADAKTTLEARNEQKNNVKDLEERFAGIKAQIEEMDRQAEQKFKNKVITGGNE KDKKINAKAELIKATMSNNPVSMEVKAALGDNNSTGGEKFLPKTMQNELLHEPFVKNPLRDVSTFTNETNLEVPKITFTL DNDDFIADTETAKELKADGDTVQFGRHKFKVFAPVSETILRGTNTNIVQTVEMALESGLSAKEKKVAFTTTSKIGEEHMS FYSTKNAIKTVEGVNKYKAIKAAIADLHEDYRENAKIIMRYADYMDIIEMLANGNATLYAAQPEQILGKPAIFCDSAVDP IVGDMRYSHFNYDLDMLYERDKDVKTGMECFVLTAWFDHQIKLKSAFRIAKTTTP >Mature_375_residues MNRYQLEQMLAGIGQDLKAANEKLTSMYADAKTTLEARNEQKNNVKDLEERFAGIKAQIEEMDRQAEQKFKNKVITGGNE KDKKINAKAELIKATMSNNPVSMEVKAALGDNNSTGGEKFLPKTMQNELLHEPFVKNPLRDVSTFTNETNLEVPKITFTL DNDDFIADTETAKELKADGDTVQFGRHKFKVFAPVSETILRGTNTNIVQTVEMALESGLSAKEKKVAFTTTSKIGEEHMS FYSTKNAIKTVEGVNKYKAIKAAIADLHEDYRENAKIIMRYADYMDIIEMLANGNATLYAAQPEQILGKPAIFCDSAVDP IVGDMRYSHFNYDLDMLYERDKDVKTGMECFVLTAWFDHQIKLKSAFRIAKTTTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42207; Mature: 42207
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRYQLEQMLAGIGQDLKAANEKLTSMYADAKTTLEARNEQKNNVKDLEERFAGIKAQIE CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH EMDRQAEQKFKNKVITGGNEKDKKINAKAELIKATMSNNPVSMEVKAALGDNNSTGGEKF HHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHH LPKTMQNELLHEPFVKNPLRDVSTFTNETNLEVPKITFTLDNDDFIADTETAKELKADGD CHHHHHHHHHHCCHHCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCC TVQFGRHKFKVFAPVSETILRGTNTNIVQTVEMALESGLSAKEKKVAFTTTSKIGEEHMS EEECCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHH FYSTKNAIKTVEGVNKYKAIKAAIADLHEDYRENAKIIMRYADYMDIIEMLANGNATLYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEE AQPEQILGKPAIFCDSAVDPIVGDMRYSHFNYDLDMLYERDKDVKTGMECFVLTAWFDHQ CCCHHHHCCCCEEECCCCCHHHHCCCHHHCCCCHHHHHHCCCCHHCCCEEEEEEEECCCE IKLKSAFRIAKTTTP EEHHHHHHHHCCCCC >Mature Secondary Structure MNRYQLEQMLAGIGQDLKAANEKLTSMYADAKTTLEARNEQKNNVKDLEERFAGIKAQIE CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH EMDRQAEQKFKNKVITGGNEKDKKINAKAELIKATMSNNPVSMEVKAALGDNNSTGGEKF HHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHH LPKTMQNELLHEPFVKNPLRDVSTFTNETNLEVPKITFTLDNDDFIADTETAKELKADGD CHHHHHHHHHHCCHHCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHCCCC TVQFGRHKFKVFAPVSETILRGTNTNIVQTVEMALESGLSAKEKKVAFTTTSKIGEEHMS EEECCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHH FYSTKNAIKTVEGVNKYKAIKAAIADLHEDYRENAKIIMRYADYMDIIEMLANGNATLYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEE AQPEQILGKPAIFCDSAVDPIVGDMRYSHFNYDLDMLYERDKDVKTGMECFVLTAWFDHQ CCCHHHHCCCCEEECCCCCHHHHCCCHHHCCCCHHHHHHCCCCHHCCCEEEEEEEECCCE IKLKSAFRIAKTTTP EEHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA