Definition | Clostridium botulinum A str. ATCC 19397, complete genome. |
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Accession | NC_009697 |
Length | 3,863,450 |
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The map label for this gene is 153933482
Identifier: 153933482
GI number: 153933482
Start: 2572674
End: 2572829
Strand: Reverse
Name: 153933482
Synonym: CLB_2445
Alternate gene names: NA
Gene position: 2572829-2572674 (Counterclockwise)
Preceding gene: 153931359
Following gene: 153933387
Centisome position: 66.59
GC content: 32.69
Gene sequence:
>156_bases ATGGGGGAAGAAAATGCAGAACACATAACATATGGAAAAGAAGAATTAGAAGCTATGACAGTAGAGCAATTAAAATCTAT AGCTAAAGATAAGAATATAGTTGGATATTCCAGTATGAATAAAGCTGACTTAATAGCAGCGATATTAGCACCTTAG
Upstream 100 bases:
>100_bases TGCTTTGTTTTAACAGCATGGTTTGACCACCAAATTAAGTTAAAATCTGCATTCAGAATAGCCAAAACAACTACTCCCTA GTGAACCCCCAAAAGAAACA
Downstream 100 bases:
>100_bases AGGAGGTGTTATTTTTATGGAATTAGAAGAAATAAAAAAATATTTAAGAATAGAAGATGAAGACATAACTTTATCTTCTC TTTTATTTGCAGCTAAATCA
Product: Rho termination factor domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 51; Mature: 50
Protein sequence:
>51_residues MGEENAEHITYGKEELEAMTVEQLKSIAKDKNIVGYSSMNKADLIAAILAP
Sequences:
>Translated_51_residues MGEENAEHITYGKEELEAMTVEQLKSIAKDKNIVGYSSMNKADLIAAILAP >Mature_50_residues GEENAEHITYGKEELEAMTVEQLKSIAKDKNIVGYSSMNKADLIAAILAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5566; Mature: 5435
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEENAEHITYGKEELEAMTVEQLKSIAKDKNIVGYSSMNKADLIAAILAP CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure GEENAEHITYGKEELEAMTVEQLKSIAKDKNIVGYSSMNKADLIAAILAP CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA