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The map label for this gene is etfB [H]

Identifier: 152976921

GI number: 152976921

Start: 3289771

End: 3290544

Strand: Reverse

Name: etfB [H]

Synonym: Bcer98_3223

Alternate gene names: 152976921

Gene position: 3290544-3289771 (Counterclockwise)

Preceding gene: 152976922

Following gene: 152976920

Centisome position: 80.51

GC content: 38.37

Gene sequence:

>774_bases
ATGAACATCTACGTACTCATGAAACGAACATTTGATACAGAAGAGAAAATTGTAATTAAGAATGGTGCAATTTATGATGG
CGAAGCAGAATTCATCATCAACCCTTACGATGAATATGCGATTGAAGAAGCCATTCAAGTAAGAGATGCACATGGCGGTG
AAATTACAGTTGTAACAGTTGGTGGTGAAGAGAGCGAAAAAGAACTTCGCACTGCGCTAGCAATGGGTTGCGACAAAGCG
GTATTAATTAATATTGAAGATGATGTGGAAAATGGCGATCAATTTACAACAGCAAAAATACTTGCGGAGTATTTAAAAGA
TAAAGAAGCAGATTTGATTTTAGGTGGAAACGTAGCGATTGATGGTGCATCTGGACAAGTTGGTCCTCGTGTAGCGGAAG
CGCTAAATATGCCATATGTAACGACAATTACAAAGCTTGAAATTGATGGTACAAAAGTGAAGATTGAGCGCGATGTTGAG
GGAGATACTGAAGTGATTGAAACATCGTTACCGCTTTTAGTAACTGCGCAGCAAGGTTTGAATGAACCTCGTTATCCATC
ACTGCCAGGTATTATGAAAGCGAAGAAGAAACCGCTTGAAGACATAGAATTAGATGATCTAGATTTAGAAGAAGAAGATG
TGGAGGCAAAAACAAAAACAATTGAAATCTACTTACCTCCTAAGAAAGATGCAGGTAAAGTGTTACAAGGCGAGCTGCAA
GATCAAGTAAAAGAACTTGTATCATTGCTCCATACAGAAGCAAAAGTAATCTAA

Upstream 100 bases:

>100_bases
AGCCTTCATTTAGCGGTAGGTAGTACATTATTTTTTTAATATAAATTAACAGAATATTTAAATTGATGAAATCTTTCTAA
AAAATAAGGGGGTAAATGGA

Downstream 100 bases:

>100_bases
TAAAATACGAAATTATATATACAGGAGGGAAAATCTATGGCTCGTAAAGTATTAGTAATGGGTGAGGTTCGTGATGGATC
ACTACGTAACGTTTCATTTG

Product: electron transfer flavoprotein alpha/beta-subunit

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MNIYVLMKRTFDTEEKIVIKNGAIYDGEAEFIINPYDEYAIEEAIQVRDAHGGEITVVTVGGEESEKELRTALAMGCDKA
VLINIEDDVENGDQFTTAKILAEYLKDKEADLILGGNVAIDGASGQVGPRVAEALNMPYVTTITKLEIDGTKVKIERDVE
GDTEVIETSLPLLVTAQQGLNEPRYPSLPGIMKAKKKPLEDIELDDLDLEEEDVEAKTKTIEIYLPPKKDAGKVLQGELQ
DQVKELVSLLHTEAKVI

Sequences:

>Translated_257_residues
MNIYVLMKRTFDTEEKIVIKNGAIYDGEAEFIINPYDEYAIEEAIQVRDAHGGEITVVTVGGEESEKELRTALAMGCDKA
VLINIEDDVENGDQFTTAKILAEYLKDKEADLILGGNVAIDGASGQVGPRVAEALNMPYVTTITKLEIDGTKVKIERDVE
GDTEVIETSLPLLVTAQQGLNEPRYPSLPGIMKAKKKPLEDIELDDLDLEEEDVEAKTKTIEIYLPPKKDAGKVLQGELQ
DQVKELVSLLHTEAKVI
>Mature_257_residues
MNIYVLMKRTFDTEEKIVIKNGAIYDGEAEFIINPYDEYAIEEAIQVRDAHGGEITVVTVGGEESEKELRTALAMGCDKA
VLINIEDDVENGDQFTTAKILAEYLKDKEADLILGGNVAIDGASGQVGPRVAEALNMPYVTTITKLEIDGTKVKIERDVE
GDTEVIETSLPLLVTAQQGLNEPRYPSLPGIMKAKKKPLEDIELDDLDLEEEDVEAKTKTIEIYLPPKKDAGKVLQGELQ
DQVKELVSLLHTEAKVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=237, Percent_Identity=35.0210970464135, Blast_Score=136, Evalue=2e-32,
Organism=Homo sapiens, GI62420877, Length=215, Percent_Identity=35.3488372093023, Blast_Score=129, Evalue=2e-30,
Organism=Escherichia coli, GI2367123, Length=237, Percent_Identity=28.2700421940928, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI87081682, Length=258, Percent_Identity=28.6821705426357, Blast_Score=80, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI25141345, Length=257, Percent_Identity=36.5758754863813, Blast_Score=143, Evalue=7e-35,
Organism=Saccharomyces cerevisiae, GI6321646, Length=256, Percent_Identity=34.375, Blast_Score=125, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24651147, Length=236, Percent_Identity=35.1694915254237, Blast_Score=111, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24651145, Length=236, Percent_Identity=35.1694915254237, Blast_Score=111, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28316; Mature: 28316

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYVLMKRTFDTEEKIVIKNGAIYDGEAEFIINPYDEYAIEEAIQVRDAHGGEITVVTV
CEEEEEEEECCCCCCEEEEECCEEECCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEE
GGEESEKELRTALAMGCDKAVLINIEDDVENGDQFTTAKILAEYLKDKEADLILGGNVAI
CCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCEEE
DGASGQVGPRVAEALNMPYVTTITKLEIDGTKVKIERDVEGDTEVIETSLPLLVTAQQGL
ECCCCCCCHHHHHHHCCCEEEEEEEEEECCEEEEEEECCCCCHHHHHCCCCEEEEEHHCC
NEPRYPSLPGIMKAKKKPLEDIELDDLDLEEEDVEAKTKTIEIYLPPKKDAGKVLQGELQ
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHCCCCEEEEEEEEECCCCCCCHHHHHHHH
DQVKELVSLLHTEAKVI
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIYVLMKRTFDTEEKIVIKNGAIYDGEAEFIINPYDEYAIEEAIQVRDAHGGEITVVTV
CEEEEEEEECCCCCCEEEEECCEEECCCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEEE
GGEESEKELRTALAMGCDKAVLINIEDDVENGDQFTTAKILAEYLKDKEADLILGGNVAI
CCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCEEE
DGASGQVGPRVAEALNMPYVTTITKLEIDGTKVKIERDVEGDTEVIETSLPLLVTAQQGL
ECCCCCCCHHHHHHHCCCEEEEEEEEEECCEEEEEEECCCCCHHHHHCCCCEEEEEHHCC
NEPRYPSLPGIMKAKKKPLEDIELDDLDLEEEDVEAKTKTIEIYLPPKKDAGKVLQGELQ
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHCCCCEEEEEEEEECCCCCCCHHHHHHHH
DQVKELVSLLHTEAKVI
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]