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The map label for this gene is ycfJ [H]

Identifier: 152969661

GI number: 152969661

Start: 1256052

End: 1256579

Strand: Direct

Name: ycfJ [H]

Synonym: KPN_01107

Alternate gene names: 152969661

Gene position: 1256052-1256579 (Clockwise)

Preceding gene: 152969660

Following gene: 152969664

Centisome position: 23.63

GC content: 59.28

Gene sequence:

>528_bases
ATGTTGGCGGGTATAGGGATAGGCGTGGCTGCCGCGCTGGGCGTTGCAGCTGTCGCTGGTCTCAACGTGTTGGATCGCGG
CCCGCAGTATGCGCAAGTGGTCTCCAGTACACCGATTAAAGAAACCGTGAAAACGCCGCGTCAGGAATGCCGCAATGTCA
CGGTGACTCATCGTCGTCCGGTACAGGATGAAAACCGCATCGCCGGTTCGGTGCTGGGCGCGGTGGCGGGCGGGGTGATT
GGCCACCAGTTTGGCGGCGGTCACGGACGCAGCGTGGCGACGGTTGTAGGTGCGCTGGGCGGCGGCTATGCAGGCAACCA
GATCCAGGGCGCGATGCAGGACAACGATACCTACACCACCACCCAGCAGCGCTGCAAAACGGTGTATGATAAATCCGATA
AAATGCTCGGCTACGATGTGACCTATAAGATAGGCGATCAGCAGGGGAAAATCCGCATGGATCACGATCCCGGCAGCCAG
ATCCCGCTGGACAACAACGGCCAGCTGGTCCTGAACAACAAAATCTAA

Upstream 100 bases:

>100_bases
ATTCTCGCACTTTTCATCCGCTATCTGATTTGCGCCCTCCCGGCTCCGGTTGCAAAATTGTATCAACAGCAACAAAGGAG
GAACTCCCGTGAATAAATCT

Downstream 100 bases:

>100_bases
AAACAGATTTGTGTAGTGATTAGCCCCTCAATCGCTCAGGCTGAGGGGCTTTTTTTATCAGAAGGTTAAGGCGTAGTTCA
GACCAAAGGTGCGGCCACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MLAGIGIGVAAALGVAAVAGLNVLDRGPQYAQVVSSTPIKETVKTPRQECRNVTVTHRRPVQDENRIAGSVLGAVAGGVI
GHQFGGGHGRSVATVVGALGGGYAGNQIQGAMQDNDTYTTTQQRCKTVYDKSDKMLGYDVTYKIGDQQGKIRMDHDPGSQ
IPLDNNGQLVLNNKI

Sequences:

>Translated_175_residues
MLAGIGIGVAAALGVAAVAGLNVLDRGPQYAQVVSSTPIKETVKTPRQECRNVTVTHRRPVQDENRIAGSVLGAVAGGVI
GHQFGGGHGRSVATVVGALGGGYAGNQIQGAMQDNDTYTTTQQRCKTVYDKSDKMLGYDVTYKIGDQQGKIRMDHDPGSQ
IPLDNNGQLVLNNKI
>Mature_175_residues
MLAGIGIGVAAALGVAAVAGLNVLDRGPQYAQVVSSTPIKETVKTPRQECRNVTVTHRRPVQDENRIAGSVLGAVAGGVI
GHQFGGGHGRSVATVVGALGGGYAGNQIQGAMQDNDTYTTTQQRCKTVYDKSDKMLGYDVTYKIGDQQGKIRMDHDPGSQ
IPLDNNGQLVLNNKI

Specific function: Unknown

COG id: COG3134

COG function: function code S; Predicted outer membrane lipoprotein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Rickettsia 17 kDa surface antigen [H]

Homologues:

Organism=Escherichia coli, GI1787353, Length=175, Percent_Identity=89.7142857142857, Blast_Score=302, Evalue=8e-84,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 18344; Mature: 18344

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAGIGIGVAAALGVAAVAGLNVLDRGPQYAQVVSSTPIKETVKTPRQECRNVTVTHRRP
CCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCC
VQDENRIAGSVLGAVAGGVIGHQFGGGHGRSVATVVGALGGGYAGNQIQGAMQDNDTYTT
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
TQQRCKTVYDKSDKMLGYDVTYKIGDQQGKIRMDHDPGSQIPLDNNGQLVLNNKI
HHHHHHHHHCCCCCEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCEEEECCCC
>Mature Secondary Structure
MLAGIGIGVAAALGVAAVAGLNVLDRGPQYAQVVSSTPIKETVKTPRQECRNVTVTHRRP
CCCCCHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCC
VQDENRIAGSVLGAVAGGVIGHQFGGGHGRSVATVVGALGGGYAGNQIQGAMQDNDTYTT
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
TQQRCKTVYDKSDKMLGYDVTYKIGDQQGKIRMDHDPGSQIPLDNNGQLVLNNKI
HHHHHHHHHCCCCCEEEEEEEEEECCCCCCEEECCCCCCCCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]