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The map label for this gene is ycfR [H]

Identifier: 152969664

GI number: 152969664

Start: 1259955

End: 1260212

Strand: Direct

Name: ycfR [H]

Synonym: KPN_01110

Alternate gene names: 152969664

Gene position: 1259955-1260212 (Clockwise)

Preceding gene: 152969661

Following gene: 152969667

Centisome position: 23.71

GC content: 53.1

Gene sequence:

>258_bases
ATGAAAACCGTTAATACTCTGGCTTTTGCCGCCGTTTTAAGTTCCCTTTCTTTCGCCAGCTTTGCCGCTGTAGAGGTGCA
GTCCACCCCTGCAGGACAGCATAAAGTAGGCACCATCTCTGCTTCTGCCGGGACTAACCTGGGCTCGCTGGAAGACCAGC
TGGCGCAGAAAGCGGATGAGATGGGCGCCACTTCATACCGTATTACTTCGGTAACCGGTCCGAATACCCTTCACGGTACC
GCCGTTATCTACAAGTAA

Upstream 100 bases:

>100_bases
CATTGACGTGTGACATAGATCACATTATTATTTACCTATCGATCGTTAAGTTAATGCTTGCGACCCTACTATAAAATTCA
TCTGCACAGGTATAATAATC

Downstream 100 bases:

>100_bases
GCCCGATGCGTCGCTGCCCGGCCCCCTTCACCGGACGGCGATGAGTAAGACCCTGTTGTACCCCTGTTTGACCCTTGCCA
ACAAAAAACCCGCCATCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKTVNTLAFAAVLSSLSFASFAAVEVQSTPAGQHKVGTISASAGTNLGSLEDQLAQKADEMGATSYRITSVTGPNTLHGT
AVIYK

Sequences:

>Translated_85_residues
MKTVNTLAFAAVLSSLSFASFAAVEVQSTPAGQHKVGTISASAGTNLGSLEDQLAQKADEMGATSYRITSVTGPNTLHGT
AVIYK
>Mature_85_residues
MKTVNTLAFAAVLSSLSFASFAAVEVQSTPAGQHKVGTISASAGTNLGSLEDQLAQKADEMGATSYRITSVTGPNTLHGT
AVIYK

Specific function: May be involved in the regulation of biofilm formation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BhsA/McbA family [H]

Homologues:

Organism=Escherichia coli, GI1787355, Length=85, Percent_Identity=85.8823529411765, Blast_Score=148, Evalue=6e-38,
Organism=Escherichia coli, GI87081785, Length=86, Percent_Identity=45.3488372093023, Blast_Score=70, Evalue=4e-14,
Organism=Escherichia coli, GI1787021, Length=86, Percent_Identity=50, Blast_Score=59, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010854 [H]

Pfam domain/function: PF07338 DUF1471 [H]

EC number: NA

Molecular weight: Translated: 8689; Mature: 8689

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVNTLAFAAVLSSLSFASFAAVEVQSTPAGQHKVGTISASAGTNLGSLEDQLAQKADE
CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
MGATSYRITSVTGPNTLHGTAVIYK
CCCCEEEEEEECCCCCCCCEEEEEC
>Mature Secondary Structure
MKTVNTLAFAAVLSSLSFASFAAVEVQSTPAGQHKVGTISASAGTNLGSLEDQLAQKADE
CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH
MGATSYRITSVTGPNTLHGTAVIYK
CCCCEEEEEEECCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]